RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 PTGFRP43088 359 aa12.25□□□□□ -0.45
ACTN1-205ENST00000538545 RNPS1Q15287 305 aaKnown RBP12.25□□□□□ -0.45
ACTN1-205ENST00000538545 SPATA46Q5T0L3 261 aa12.25□□□□□ -0.45
ACTN1-205ENST00000538545 BRICD5Q6PL45 260 aa12.25□□□□□ -0.45
ACTN1-205ENST00000538545 DNM1P46Q6ZS02 220 aa12.25□□□□□ -0.45
ACTN1-205ENST00000538545 OR52H1Q8NGJ2 320 aa12.25□□□□□ -0.45
ACTN1-205ENST00000538545 WDR89Q96FK6 387 aaPredicted RBP12.25□□□□□ -0.45
ACTN1-205ENST00000538545 CHST6Q9GZX3 395 aa12.25□□□□□ -0.45
ACTN1-205ENST00000538545 RNF122Q9H9V4 155 aa12.25□□□□□ -0.45
ACTN1-205ENST00000538545 RYDENQ9NUL5 291 aaKnown RBP12.25□□□□□ -0.45
ACTN1-205ENST00000538545 PYCARD-AS1I3L0S3 204 aa12.24□□□□□ -0.45
ACTN1-205ENST00000538545 GSK3AP49840 483 aa12.24□□□□□ -0.45
ACTN1-205ENST00000538545 MTCP1P56278 107 aa12.24□□□□□ -0.45
ACTN1-205ENST00000538545 ECH1Q13011 328 aa12.24□□□□□ -0.45
ACTN1-205ENST00000538545 ZNF585AQ6P3V2 769 aa12.24□□□□□ -0.45
ACTN1-205ENST00000538545 IGF2-ASQ6U949 168 aa12.24□□□□□ -0.45
ACTN1-205ENST00000538545 C17orf107Q6ZR85 190 aa12.24□□□□□ -0.45
ACTN1-205ENST00000538545 BTN2A1Q7KYR7 527 aa12.24□□□□□ -0.45
ACTN1-205ENST00000538545 CAPSLQ8WWF8 208 aa12.24□□□□□ -0.45
ACTN1-205ENST00000538545 TMEM59Q9BXS4 323 aa12.24□□□□□ -0.45
ACTN1-205ENST00000538545 LINC00470Q9BZP3 86 aa12.24□□□□□ -0.45
ACTN1-205ENST00000538545 LILRA1O75019 489 aa12.24□□□□□ -0.45
ACTN1-205ENST00000538545 BPNT1O95861 308 aa12.24□□□□□ -0.45
ACTN1-205ENST00000538545 DHFRP00374 187 aa12.24□□□□□ -0.45
ACTN1-205ENST00000538545 STOMP27105 288 aa12.24□□□□□ -0.45
ACTN1-205ENST00000538545 RBMXP38159 391 aaKnown RBP12.24□□□□□ -0.45
ACTN1-205ENST00000538545 ZFP69Q49AA0 526 aa12.24□□□□□ -0.45
ACTN1-205ENST00000538545 HACD4Q5VWC8 232 aa12.24□□□□□ -0.45
ACTN1-205ENST00000538545 TRAPPC6BQ86SZ2 158 aa12.24□□□□□ -0.45
ACTN1-205ENST00000538545 C9orf106Q8NAJ2 232 aa12.24□□□□□ -0.45
ACTN1-205ENST00000538545 ARHGAP5-AS1Q96IT6 56 aa12.24□□□□□ -0.45
ACTN1-205ENST00000538545 NPAP1Q9NZP6 1156 aa12.24□□□□□ -0.45
ACTN1-205ENST00000538545 ZNF222Q9UK12 451 aa12.24□□□□□ -0.45
ACTN1-205ENST00000538545 TPRP12270 2363 aaKnown RBP12.24□□□□□ -0.45
ACTN1-205ENST00000538545 METTL21EPA6NDL7 271 aa12.24□□□□□ -0.45
ACTN1-205ENST00000538545 TMEM127O75204 238 aa12.24□□□□□ -0.45
ACTN1-205ENST00000538545 MTRF1O75570 445 aaKnown RBP12.24□□□□□ -0.45
ACTN1-205ENST00000538545 ECDO95905 644 aaPredicted RBP12.24□□□□□ -0.45
ACTN1-205ENST00000538545 TMEM225BP0DP42 221 aa12.24□□□□□ -0.45
ACTN1-205ENST00000538545 THBS4P35443 961 aa12.24□□□□□ -0.45
ACTN1-205ENST00000538545 PCBD1P61457 104 aa12.24□□□□□ -0.45
ACTN1-205ENST00000538545 STEAP1BQ6NZ63 245 aa12.24□□□□□ -0.45
ACTN1-205ENST00000538545 GABRG1Q8N1C3 465 aa12.24□□□□□ -0.45
ACTN1-205ENST00000538545 AKAP1Q92667 903 aaKnown RBP eCLIP12.24□□□□□ -0.45
ACTN1-205ENST00000538545 PRRX2Q99811 253 aa12.24□□□□□ -0.45
ACTN1-205ENST00000538545 ZNF230Q9UIE0 474 aaPredicted RBP12.24□□□□□ -0.45
ACTN1-205ENST00000538545 GPR160Q9UJ42 338 aa12.24□□□□□ -0.45
ACTN1-205ENST00000538545 STARD10Q9Y365 291 aa12.24□□□□□ -0.45
ACTN1-205ENST00000538545 IGHV3-64DA0A0J9YX35 117 aa12.23□□□□□ -0.45
ACTN1-205ENST00000538545 hCG_38984A0A1B0GV85 526 aa12.23□□□□□ -0.45
ACTN1-205ENST00000538545 RLN1P04808 185 aa12.23□□□□□ -0.45
ACTN1-205ENST00000538545 ERCC1P07992 297 aaPredicted RBP12.23□□□□□ -0.45
ACTN1-205ENST00000538545 GK2Q14410 553 aaPredicted RBP12.23□□□□□ -0.45
ACTN1-205ENST00000538545 KRTAP27-1Q3LI81 207 aa12.23□□□□□ -0.45
ACTN1-205ENST00000538545 SCGB2B2Q4G0G5 96 aa12.23□□□□□ -0.45
ACTN1-205ENST00000538545 FBXW9Q5XUX1 488 aa12.23□□□□□ -0.45
ACTN1-205ENST00000538545 CCDC120Q96HB5 630 aa12.23□□□□□ -0.45
ACTN1-205ENST00000538545 MICU1Q9BPX6 476 aa12.23□□□□□ -0.45
ACTN1-205ENST00000538545 GINS4Q9BRT9 223 aa12.23□□□□□ -0.45
ACTN1-205ENST00000538545 OR51J1Q9H342 316 aa12.23□□□□□ -0.45
ACTN1-205ENST00000538545 ZNF850A8MQ14 1090 aa12.23□□□□□ -0.45
ACTN1-205ENST00000538545 RPL36A-HNRNPH2H7BZ11 118 aa12.23□□□□□ -0.45
ACTN1-205ENST00000538545 SSX5O60225 188 aa12.23□□□□□ -0.45
ACTN1-205ENST00000538545 LPLP06858 475 aa12.23□□□□□ -0.45
ACTN1-205ENST00000538545 GABRR1P24046 479 aa12.23□□□□□ -0.45
ACTN1-205ENST00000538545 RCVRNP35243 200 aa12.23□□□□□ -0.45
ACTN1-205ENST00000538545 AP3S2P59780 193 aa12.23□□□□□ -0.45
ACTN1-205ENST00000538545 MRPS10P82664 201 aaKnown RBP12.23□□□□□ -0.45
ACTN1-205ENST00000538545 RIPPLY1Q0D2K3 151 aa12.23□□□□□ -0.45
ACTN1-205ENST00000538545 ALKBH2Q6NS38 261 aa12.23□□□□□ -0.45
ACTN1-205ENST00000538545 MOB3CQ70IA8 216 aa12.23□□□□□ -0.45
ACTN1-205ENST00000538545 OR56B2PQ8NGI1 322 aa12.23□□□□□ -0.45
ACTN1-205ENST00000538545 OR51T1Q8NGJ9 327 aa12.23□□□□□ -0.45
ACTN1-205ENST00000538545 OR10R2Q8NGX6 335 aa12.23□□□□□ -0.45
ACTN1-205ENST00000538545 AQP3Q92482 292 aa12.23□□□□□ -0.45
ACTN1-205ENST00000538545 MED28Q9H204 178 aa12.23□□□□□ -0.45
ACTN1-205ENST00000538545 PTTG3PQ9NZH4 202 aa12.23□□□□□ -0.45
ACTN1-205ENST00000538545 IGHG3P01860 377 aa12.22□□□□□ -0.45
ACTN1-205ENST00000538545 APOC1P02654 83 aa12.22□□□□□ -0.45
ACTN1-205ENST00000538545 TPOP07202 933 aa12.22□□□□□ -0.45
ACTN1-205ENST00000538545 VSIG10L2P0DP72 767 aa12.22□□□□□ -0.45
ACTN1-205ENST00000538545 PRF1P14222 555 aa12.22□□□□□ -0.45
ACTN1-205ENST00000538545 MGMTP16455 207 aa12.22□□□□□ -0.45
ACTN1-205ENST00000538545 SNU13P55769 128 aaKnown RBP12.22□□□□□ -0.45
ACTN1-205ENST00000538545 MDP1Q86V88 176 aa12.22□□□□□ -0.45
ACTN1-205ENST00000538545 SNIP1Q8TAD8 396 aaKnown RBP12.22□□□□□ -0.45
ACTN1-205ENST00000538545 DYRK2Q92630 601 aa12.22□□□□□ -0.45
ACTN1-205ENST00000538545 CLCF1Q9UBD9 225 aa12.22□□□□□ -0.45
ACTN1-205ENST00000538545 NRASP01111 189 aa12.22□□□□□ -0.45
ACTN1-205ENST00000538545 AMY2AP04746 511 aa12.22□□□□□ -0.45
ACTN1-205ENST00000538545 GSTT2BP0CG30 244 aa12.22□□□□□ -0.45
ACTN1-205ENST00000538545 IGHV1-2P23083 117 aa12.22□□□□□ -0.45
ACTN1-205ENST00000538545 IL32P24001 234 aa12.22□□□□□ -0.45
ACTN1-205ENST00000538545 BTG1P62324 171 aa12.22□□□□□ -0.45
ACTN1-205ENST00000538545 CALHM1Q8IU99 346 aa12.22□□□□□ -0.45
ACTN1-205ENST00000538545 ZADH2Q8N4Q0 377 aa12.22□□□□□ -0.45
ACTN1-205ENST00000538545 UXS1Q8NBZ7 420 aa12.22□□□□□ -0.45
ACTN1-205ENST00000538545 HDHD3Q9BSH5 251 aaPredicted RBP12.22□□□□□ -0.45
ACTN1-205ENST00000538545 IGKV1-12A0A0C4DH73 117 aa12.21□□□□□ -0.45
ACTN1-205ENST00000538545 SSNA1O43805 119 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms