RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 RAD51DO75771 328 aa9.98□□□□□ -0.81
SLC28A1-204ENST00000538177 IFNA6P05013 189 aa9.98□□□□□ -0.81
SLC28A1-204ENST00000538177 FCGR2AP12318 317 aa9.98□□□□□ -0.81
SLC28A1-204ENST00000538177 ZNF32P17041 273 aa9.98□□□□□ -0.81
SLC28A1-204ENST00000538177 CBX5P45973 191 aa9.98□□□□□ -0.81
SLC28A1-204ENST00000538177 GK2Q14410 553 aaPredicted RBP9.98□□□□□ -0.81
SLC28A1-204ENST00000538177 ACTBL2Q562R1 376 aa9.98□□□□□ -0.81
SLC28A1-204ENST00000538177 DMRTC1Q5HYR2 192 aa9.98□□□□□ -0.81
SLC28A1-204ENST00000538177 CLLU1Q5K131 121 aa9.98□□□□□ -0.81
SLC28A1-204ENST00000538177 VAX1Q5SQQ9 334 aa9.98□□□□□ -0.81
SLC28A1-204ENST00000538177 C11orf88Q6PI97 169 aa9.98□□□□□ -0.81
SLC28A1-204ENST00000538177 C17orf107Q6ZR85 190 aa9.98□□□□□ -0.81
SLC28A1-204ENST00000538177 LYG2Q86SG7 212 aa9.98□□□□□ -0.81
SLC28A1-204ENST00000538177 ARHGAP5-AS1Q96IT6 56 aa9.98□□□□□ -0.81
SLC28A1-204ENST00000538177 ALKBH3Q96Q83 286 aaPredicted RBP9.98□□□□□ -0.81
SLC28A1-204ENST00000538177 FOXB1Q99853 325 aa9.98□□□□□ -0.81
SLC28A1-204ENST00000538177 TM2D1Q9BX74 207 aa9.98□□□□□ -0.81
SLC28A1-204ENST00000538177 GPR35Q9HC97 309 aa9.98□□□□□ -0.81
SLC28A1-204ENST00000538177 MAB21L2Q9Y586 359 aa9.98□□□□□ -0.81
SLC28A1-204ENST00000538177 TIMM10BQ9Y5J6 103 aa9.98□□□□□ -0.81
SLC28A1-204ENST00000538177 IGKV3D-15A0A087WSY6 115 aa9.97□□□□□ -0.81
SLC28A1-204ENST00000538177 PMP2P02689 132 aa9.97□□□□□ -0.81
SLC28A1-204ENST00000538177 HPNP05981 417 aa9.97□□□□□ -0.81
SLC28A1-204ENST00000538177 B4GALT1P15291 398 aa9.97□□□□□ -0.81
SLC28A1-204ENST00000538177 MGMTP16455 207 aa9.97□□□□□ -0.81
SLC28A1-204ENST00000538177 HLA-GP17693 338 aa9.97□□□□□ -0.81
SLC28A1-204ENST00000538177 GMFBP60983 142 aa9.97□□□□□ -0.81
SLC28A1-204ENST00000538177 HGFACQ04756 655 aa9.97□□□□□ -0.81
SLC28A1-204ENST00000538177 MICBQ29980 383 aa9.97□□□□□ -0.81
SLC28A1-204ENST00000538177 CEACAM16Q2WEN9 425 aa9.97□□□□□ -0.81
SLC28A1-204ENST00000538177 ESCO2Q56NI9 601 aa9.97□□□□□ -0.81
SLC28A1-204ENST00000538177 DCAF10Q5QP82 559 aa9.97□□□□□ -0.81
SLC28A1-204ENST00000538177 LPCAT3Q6P1A2 487 aa9.97□□□□□ -0.81
SLC28A1-204ENST00000538177 HOGA1Q86XE5 327 aa9.97□□□□□ -0.81
SLC28A1-204ENST00000538177 STEAP2Q8NFT2 490 aa9.97□□□□□ -0.81
SLC28A1-204ENST00000538177 SEMA6DQ8NFY4 1073 aa9.97□□□□□ -0.81
SLC28A1-204ENST00000538177 OR51T1Q8NGJ9 327 aa9.97□□□□□ -0.81
SLC28A1-204ENST00000538177 OR5D18Q8NGL1 313 aa9.97□□□□□ -0.81
SLC28A1-204ENST00000538177 OR5M8Q8NGP6 311 aa9.97□□□□□ -0.81
SLC28A1-204ENST00000538177 NPRL2Q8WTW4 380 aa9.97□□□□□ -0.81
SLC28A1-204ENST00000538177 ZNF845Q96IR2 970 aaPredicted RBP9.97□□□□□ -0.81
SLC28A1-204ENST00000538177 SIGLEC12Q96PQ1 595 aa9.97□□□□□ -0.81
SLC28A1-204ENST00000538177 CITED4Q96RK1 184 aa9.97□□□□□ -0.81
SLC28A1-204ENST00000538177 CDC6Q99741 560 aa9.97□□□□□ -0.81
SLC28A1-204ENST00000538177 ZNF703Q9H7S9 590 aaPredicted RBP9.97□□□□□ -0.81
SLC28A1-204ENST00000538177 EFSO43281 561 aa9.97□□□□□ -0.81
SLC28A1-204ENST00000538177 CD8AP01732 235 aa9.97□□□□□ -0.81
SLC28A1-204ENST00000538177 HLA-AP01891 365 aaKnown RBP9.97□□□□□ -0.81
SLC28A1-204ENST00000538177 ACKR3P25106 362 aa9.97□□□□□ -0.81
SLC28A1-204ENST00000538177 CD34P28906 385 aa9.97□□□□□ -0.81
SLC28A1-204ENST00000538177 S100A11P31949 105 aa9.97□□□□□ -0.81
SLC28A1-204ENST00000538177 PCBD1P61457 104 aa9.97□□□□□ -0.81
SLC28A1-204ENST00000538177 PSG4Q00888 419 aa9.97□□□□□ -0.81
SLC28A1-204ENST00000538177 RSPO4Q2I0M5 234 aaPredicted RBP9.97□□□□□ -0.81
SLC28A1-204ENST00000538177 SFRP5Q5T4F7 317 aa9.97□□□□□ -0.81
SLC28A1-204ENST00000538177 SULF2Q8IWU5 870 aa9.97□□□□□ -0.81
SLC28A1-204ENST00000538177 ARRDC1Q8N5I2 433 aa9.97□□□□□ -0.81
SLC28A1-204ENST00000538177 AKR7LQ8NHP1 331 aa9.97□□□□□ -0.81
SLC28A1-204ENST00000538177 ABHD3Q8WU67 409 aa9.97□□□□□ -0.81
SLC28A1-204ENST00000538177 MITD1Q8WV92 249 aa9.97□□□□□ -0.81
SLC28A1-204ENST00000538177 SPSB1Q96BD6 273 aa9.97□□□□□ -0.81
SLC28A1-204ENST00000538177 OR2H1Q9GZK4 316 aa9.97□□□□□ -0.81
SLC28A1-204ENST00000538177 WNT5BQ9H1J7 359 aa9.97□□□□□ -0.81
SLC28A1-204ENST00000538177 ABI3Q9P2A4 366 aa9.97□□□□□ -0.81
SLC28A1-204ENST00000538177 KCNN3Q9UGI6 736 aa9.97□□□□□ -0.81
SLC28A1-204ENST00000538177 MYO7BQ6PIF6 2116 aa9.96□□□□□ -0.81
SLC28A1-204ENST00000538177 FXYD6-FXYD2A0A087WZ82 144 aa9.96□□□□□ -0.82
SLC28A1-204ENST00000538177 C9orf170A2RU37 121 aa9.96□□□□□ -0.82
SLC28A1-204ENST00000538177 RFPL4AA6NLU0 287 aa9.96□□□□□ -0.82
SLC28A1-204ENST00000538177 CEACAM18A8MTB9 384 aa9.96□□□□□ -0.82
SLC28A1-204ENST00000538177 RFPL4AL1F8VTS6 287 aa9.96□□□□□ -0.82
SLC28A1-204ENST00000538177 ARPC5O15511 151 aa9.96□□□□□ -0.82
SLC28A1-204ENST00000538177 CA11O75493 328 aa9.96□□□□□ -0.82
SLC28A1-204ENST00000538177 PATE4P0C8F1 98 aa9.96□□□□□ -0.82
SLC28A1-204ENST00000538177 AVPR2P30518 371 aa9.96□□□□□ -0.82
SLC28A1-204ENST00000538177 LHX2P50458 406 aa9.96□□□□□ -0.82
SLC28A1-204ENST00000538177 PPP1R1AQ13522 171 aa9.96□□□□□ -0.82
SLC28A1-204ENST00000538177 HLXQ14774 488 aaPredicted RBP9.96□□□□□ -0.82
SLC28A1-204ENST00000538177 NRN1LQ496H8 165 aa9.96□□□□□ -0.82
SLC28A1-204ENST00000538177 C3P1Q6ZMU1 363 aa9.96□□□□□ -0.82
SLC28A1-204ENST00000538177 TMUB2Q71RG4 321 aa9.96□□□□□ -0.82
SLC28A1-204ENST00000538177 TERB2Q8NHR7 220 aa9.96□□□□□ -0.82
SLC28A1-204ENST00000538177 FGFBP3Q8TAT2 258 aa9.96□□□□□ -0.82
SLC28A1-204ENST00000538177 ST8SIA4Q92187 359 aa9.96□□□□□ -0.82
SLC28A1-204ENST00000538177 PIGTQ969N2 578 aa9.96□□□□□ -0.82
SLC28A1-204ENST00000538177 FBXW5Q969U6 566 aa9.96□□□□□ -0.82
SLC28A1-204ENST00000538177 REEP6Q96HR9 211 aa9.96□□□□□ -0.82
SLC28A1-204ENST00000538177 GSX2Q9BZM3 304 aa9.96□□□□□ -0.82
SLC28A1-204ENST00000538177 FXYD6Q9H0Q3 95 aa9.96□□□□□ -0.82
SLC28A1-204ENST00000538177 FN3KRPQ9HA64 309 aa9.96□□□□□ -0.82
SLC28A1-204ENST00000538177 B4GALT7Q9UBV7 327 aa9.96□□□□□ -0.82
SLC28A1-204ENST00000538177 ZNF391Q9UJN7 358 aa9.96□□□□□ -0.82
SLC28A1-204ENST00000538177 LOC100509620A0A075B734 347 aa9.95□□□□□ -0.82
SLC28A1-204ENST00000538177 TRAV14DV4A0A0A6YYC5 116 aa9.95□□□□□ -0.82
SLC28A1-204ENST00000538177 TUBAL3A6NHL2 446 aa9.95□□□□□ -0.82
SLC28A1-204ENST00000538177 SERPINE3A8MV23 424 aa9.95□□□□□ -0.82
SLC28A1-204ENST00000538177 LCATP04180 440 aa9.95□□□□□ -0.82
SLC28A1-204ENST00000538177 RPA2P15927 270 aa9.95□□□□□ -0.82
SLC28A1-204ENST00000538177 PPP3CBP16298 524 aa9.95□□□□□ -0.82
SLC28A1-204ENST00000538177 BLVRBP30043 206 aaPredicted RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms