RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 COLQQ9Y215 455 aaPredicted RBP10.04□□□□□ -0.8
LINC00346-201ENST00000538077 QSER1Q2KHR3 1735 aa10.04□□□□□ -0.8
LINC00346-201ENST00000538077 TNFSF14O43557 240 aa10.04□□□□□ -0.8
LINC00346-201ENST00000538077 PCBP4P57723 403 aaKnown RBP10.04□□□□□ -0.8
LINC00346-201ENST00000538077 ACOT7LQ6ZUV0 252 aa10.04□□□□□ -0.8
LINC00346-201ENST00000538077 OR4D9Q8NGE8 314 aa10.04□□□□□ -0.8
LINC00346-201ENST00000538077 OR2T6Q8NHC8 308 aa10.04□□□□□ -0.8
LINC00346-201ENST00000538077 RPEQ96AT9 228 aa10.04□□□□□ -0.8
LINC00346-201ENST00000538077 CMTM3Q96MX0 182 aa10.04□□□□□ -0.8
LINC00346-201ENST00000538077 SPACA1Q9HBV2 294 aa10.04□□□□□ -0.8
LINC00346-201ENST00000538077 DLL4Q9NR61 685 aa10.04□□□□□ -0.8
LINC00346-201ENST00000538077 TRBV5-4A0A0C4DH59 114 aa10.04□□□□□ -0.8
LINC00346-201ENST00000538077 ZAR1LA6NP61 321 aa10.04□□□□□ -0.8
LINC00346-201ENST00000538077 J3KRW8 73 aa10.04□□□□□ -0.8
LINC00346-201ENST00000538077 TCAPO15273 167 aa10.04□□□□□ -0.8
LINC00346-201ENST00000538077 MPZL1O95297 269 aa10.04□□□□□ -0.8
LINC00346-201ENST00000538077 APOBEC3DQ96AK3 386 aaPredicted RBP10.04□□□□□ -0.8
LINC00346-201ENST00000538077 ZNF707Q96C28 371 aaPredicted RBP10.04□□□□□ -0.8
LINC00346-201ENST00000538077 OR8B4Q96RC9 309 aa10.04□□□□□ -0.8
LINC00346-201ENST00000538077 HES4Q9HCC6 221 aa10.04□□□□□ -0.8
LINC00346-201ENST00000538077 GOLT1BQ9Y3E0 138 aa10.04□□□□□ -0.8
LINC00346-201ENST00000538077 ANKRD31Q8N7Z5 1873 aa10.04□□□□□ -0.8
LINC00346-201ENST00000538077 NUMA1Q14980 2115 aa10.04□□□□□ -0.8
LINC00346-201ENST00000538077 GP2P55259 537 aaKnown RBP10.04□□□□□ -0.8
LINC00346-201ENST00000538077 LYG1Q8N1E2 194 aa10.04□□□□□ -0.8
LINC00346-201ENST00000538077 LRRC29Q8WV35 223 aa10.04□□□□□ -0.8
LINC00346-201ENST00000538077 RHNO1Q9BSD3 238 aa10.04□□□□□ -0.8
LINC00346-201ENST00000538077 TCRBV5S2A0A599 114 aa10.04□□□□□ -0.8
LINC00346-201ENST00000538077 DNASE2O00115 360 aaPredicted RBP10.04□□□□□ -0.8
LINC00346-201ENST00000538077 ST8SIA3O43173 380 aa10.04□□□□□ -0.8
LINC00346-201ENST00000538077 APELAP0DMC3 54 aa10.04□□□□□ -0.8
LINC00346-201ENST00000538077 NTF3P20783 257 aa10.04□□□□□ -0.8
LINC00346-201ENST00000538077 OPRK1P41145 380 aa10.04□□□□□ -0.8
LINC00346-201ENST00000538077 AQP6Q13520 282 aa10.04□□□□□ -0.8
LINC00346-201ENST00000538077 FAM27D1Q5T7N8 215 aa10.04□□□□□ -0.8
LINC00346-201ENST00000538077 PXDC1Q5TGL8 231 aa10.04□□□□□ -0.8
LINC00346-201ENST00000538077 PTOV1Q86YD1 416 aa10.04□□□□□ -0.8
LINC00346-201ENST00000538077 LINC01555Q8NAE3 123 aa10.04□□□□□ -0.8
LINC00346-201ENST00000538077 OR5H6Q8NGV6 325 aa10.04□□□□□ -0.8
LINC00346-201ENST00000538077 CORO2AQ92828 525 aa10.04□□□□□ -0.8
LINC00346-201ENST00000538077 FBXO34Q9NWN3 711 aa10.04□□□□□ -0.8
LINC00346-201ENST00000538077 NDUFB11Q9NX14 153 aa10.04□□□□□ -0.8
LINC00346-201ENST00000538077 ATAD5Q96QE3 1844 aa10.03□□□□□ -0.8
LINC00346-201ENST00000538077 DBPQ10586 325 aaPredicted RBP10.03□□□□□ -0.8
LINC00346-201ENST00000538077 OR52N4Q8NGI2 321 aa10.03□□□□□ -0.8
LINC00346-201ENST00000538077 BLNKQ8WV28 456 aa10.03□□□□□ -0.8
LINC00346-201ENST00000538077 MCHR2Q969V1 340 aa10.03□□□□□ -0.8
LINC00346-201ENST00000538077 ARL2-SNX15V9GYD0 113 aa10.03□□□□□ -0.8
LINC00346-201ENST00000538077 MYO18AQ92614 2054 aaKnown RBP10.03□□□□□ -0.8
LINC00346-201ENST00000538077 ZNHIT1O43257 154 aa10.03□□□□□ -0.8
LINC00346-201ENST00000538077 TNFRSF1AP19438 455 aa10.03□□□□□ -0.8
LINC00346-201ENST00000538077 NXPH1P58417 271 aa10.03□□□□□ -0.8
LINC00346-201ENST00000538077 ZNF90Q03938 601 aa10.03□□□□□ -0.8
LINC00346-201ENST00000538077 DUS3LQ96G46 650 aaKnown RBP10.03□□□□□ -0.8
LINC00346-201ENST00000538077 RBM14Q96PK6 669 aaKnown RBP10.03□□□□□ -0.8
LINC00346-201ENST00000538077 TCEAL7Q9BRU2 100 aa10.03□□□□□ -0.8
LINC00346-201ENST00000538077 LHX9Q9NQ69 397 aa10.03□□□□□ -0.8
LINC00346-201ENST00000538077 C20orf202A1L168 122 aa10.03□□□□□ -0.8
LINC00346-201ENST00000538077 FCGR3BO75015 233 aa10.03□□□□□ -0.8
LINC00346-201ENST00000538077 PPP1CBP62140 327 aa10.03□□□□□ -0.8
LINC00346-201ENST00000538077 ACOT6Q3I5F7 207 aaPredicted RBP10.03□□□□□ -0.8
LINC00346-201ENST00000538077 MAMSTRQ6ZN01 415 aa10.03□□□□□ -0.8
LINC00346-201ENST00000538077 SPRED2Q7Z698 418 aa10.03□□□□□ -0.8
LINC00346-201ENST00000538077 FBXO8Q9NRD0 319 aa10.03□□□□□ -0.8
LINC00346-201ENST00000538077 SLC6A13Q9NSD5 602 aa10.03□□□□□ -0.8
LINC00346-201ENST00000538077 PSG11Q9UQ72 335 aa10.03□□□□□ -0.8
LINC00346-201ENST00000538077 FZD6O60353 706 aa10.03□□□□□ -0.8
LINC00346-201ENST00000538077 WNT1P04628 370 aa10.03□□□□□ -0.8
LINC00346-201ENST00000538077 OR5H8P0DN80 308 aa10.03□□□□□ -0.8
LINC00346-201ENST00000538077 HTN1P15515 57 aa10.03□□□□□ -0.8
LINC00346-201ENST00000538077 ADRA2CP18825 462 aa10.03□□□□□ -0.8
LINC00346-201ENST00000538077 RNPS1Q15287 305 aaKnown RBP10.03□□□□□ -0.8
LINC00346-201ENST00000538077 CDH26Q8IXH8 852 aa10.03□□□□□ -0.8
LINC00346-201ENST00000538077 GABARAPL3Q9BY60 117 aa10.03□□□□□ -0.8
LINC00346-201ENST00000538077 PRDM7Q9NQW5 492 aa10.03□□□□□ -0.8
LINC00346-201ENST00000538077 MRPS18BQ9Y676 258 aaKnown RBP10.03□□□□□ -0.8
LINC00346-201ENST00000538077 TMEM30CPA0ZSE6 113 aa10.03□□□□□ -0.8
LINC00346-201ENST00000538077 SMIM17P0DL12 118 aa10.03□□□□□ -0.8
LINC00346-201ENST00000538077 TRA2AQ13595 282 aaKnown RBP eCLIP10.03□□□□□ -0.8
LINC00346-201ENST00000538077 PRICKLE4Q2TBC4 344 aa10.03□□□□□ -0.8
LINC00346-201ENST00000538077 PABPC1L2AQ5JQF8 200 aa10.03□□□□□ -0.8
LINC00346-201ENST00000538077 EXTL1Q92935 676 aa10.03□□□□□ -0.8
LINC00346-201ENST00000538077 DERL3Q96Q80 235 aa10.03□□□□□ -0.8
LINC00346-201ENST00000538077 DOK5Q9P104 306 aa10.03□□□□□ -0.8
LINC00346-201ENST00000538077 TMEM200CA6NKL6 621 aa10.02□□□□□ -0.8
LINC00346-201ENST00000538077 FOXL2P58012 376 aa10.02□□□□□ -0.8
LINC00346-201ENST00000538077 SLC25A32Q9H2D1 315 aa10.02□□□□□ -0.8
LINC00346-201ENST00000538077 TMEM129A0AVI4 362 aa10.02□□□□□ -0.81
LINC00346-201ENST00000538077 KLK8O60259 260 aa10.02□□□□□ -0.81
LINC00346-201ENST00000538077 METTL15P1P0C7V9 234 aa10.02□□□□□ -0.81
LINC00346-201ENST00000538077 TAS2R45P59539 299 aa10.02□□□□□ -0.81
LINC00346-201ENST00000538077 INSL4Q14641 139 aa10.02□□□□□ -0.81
LINC00346-201ENST00000538077 ACSM6Q6P461 480 aa10.02□□□□□ -0.81
LINC00346-201ENST00000538077 C2CD4CQ8TF44 421 aa10.02□□□□□ -0.81
LINC00346-201ENST00000538077 SMIM19Q96E16 107 aa10.02□□□□□ -0.81
LINC00346-201ENST00000538077 ACTR3CQ9C0K3 210 aaPredicted RBP10.02□□□□□ -0.81
LINC00346-201ENST00000538077 C20orf141Q9NUB4 165 aa10.02□□□□□ -0.81
LINC00346-201ENST00000538077 ICAM5Q9UMF0 924 aa10.02□□□□□ -0.81
LINC00346-201ENST00000538077 CT62P0C5K7 136 aa10.02□□□□□ -0.81
LINC00346-201ENST00000538077 SLC25A4P12235 298 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms