RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 VHLLQ6RSH7 139 aa9.72□□□□□ -0.85
CLSTN3-207ENST00000537408 SLC25A26Q70HW3 274 aa9.72□□□□□ -0.85
CLSTN3-207ENST00000537408 FAM213BQ8TBF2 198 aa9.72□□□□□ -0.85
CLSTN3-207ENST00000537408 ARSGQ96EG1 525 aa9.72□□□□□ -0.85
CLSTN3-207ENST00000537408 SEPSECSQ9HD40 501 aaKnown RBP9.72□□□□□ -0.85
CLSTN3-207ENST00000537408 KIR2DL5BA0A0G2JN68 375 aa9.71□□□□□ -0.85
CLSTN3-207ENST00000537408 KIR2DL5BA0A0G2JPC4 375 aa9.71□□□□□ -0.85
CLSTN3-207ENST00000537408 IL18BPO95998 194 aa9.71□□□□□ -0.85
CLSTN3-207ENST00000537408 CYB5R3P00387 301 aaPredicted RBP9.71□□□□□ -0.85
CLSTN3-207ENST00000537408 KIR2DL1P43626 348 aaPredicted RBP9.71□□□□□ -0.85
CLSTN3-207ENST00000537408 NFATC4Q14934 902 aa9.71□□□□□ -0.85
CLSTN3-207ENST00000537408 TRIP6Q15654 476 aaKnown RBP9.71□□□□□ -0.85
CLSTN3-207ENST00000537408 EIPR1Q53HC9 387 aa9.71□□□□□ -0.85
CLSTN3-207ENST00000537408 OR8G2PQ6IF36 304 aa9.71□□□□□ -0.85
CLSTN3-207ENST00000537408 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.71□□□□□ -0.85
CLSTN3-207ENST00000537408 KIR2DL5AQ8N109 375 aa9.71□□□□□ -0.85
CLSTN3-207ENST00000537408 OR5L2Q8NGL0 311 aa9.71□□□□□ -0.85
CLSTN3-207ENST00000537408 TSACCQ96A04 125 aaPredicted RBP9.71□□□□□ -0.85
CLSTN3-207ENST00000537408 GNRHR2Q96P88 292 aa9.71□□□□□ -0.85
CLSTN3-207ENST00000537408 SYT3Q9BQG1 590 aa9.71□□□□□ -0.85
CLSTN3-207ENST00000537408 MIEN1Q9BRT3 115 aa9.71□□□□□ -0.85
CLSTN3-207ENST00000537408 CABLES2Q9BTV7 478 aa9.71□□□□□ -0.85
CLSTN3-207ENST00000537408 ANGPTL4Q9BY76 406 aa9.71□□□□□ -0.85
CLSTN3-207ENST00000537408 MSL2Q9HCI7 577 aa9.71□□□□□ -0.85
CLSTN3-207ENST00000537408 TMED7Q9Y3B3 224 aa9.71□□□□□ -0.85
CLSTN3-207ENST00000537408 CKAP5Q14008 2032 aa9.71□□□□□ -0.85
CLSTN3-207ENST00000537408 K7EP13 123 aa9.71□□□□□ -0.85
CLSTN3-207ENST00000537408 AQP7O14520 342 aa9.71□□□□□ -0.85
CLSTN3-207ENST00000537408 NTN1O95631 604 aa9.71□□□□□ -0.85
CLSTN3-207ENST00000537408 OPN1MWP04001 364 aa9.71□□□□□ -0.85
CLSTN3-207ENST00000537408 IL6RP08887 468 aaPredicted RBP9.71□□□□□ -0.85
CLSTN3-207ENST00000537408 OPN1MW2P0DN77 364 aa9.71□□□□□ -0.85
CLSTN3-207ENST00000537408 OPN1MW3P0DN78 364 aa9.71□□□□□ -0.85
CLSTN3-207ENST00000537408 TNFSF10P50591 281 aa9.71□□□□□ -0.85
CLSTN3-207ENST00000537408 HIST1H3AP68431 136 aa9.71□□□□□ -0.85
CLSTN3-207ENST00000537408 DEFB133Q30KQ1 61 aa9.71□□□□□ -0.85
CLSTN3-207ENST00000537408 C2orf76Q3KRA6 126 aa9.71□□□□□ -0.85
CLSTN3-207ENST00000537408 RFLNAQ6ZTI6 216 aa9.71□□□□□ -0.85
CLSTN3-207ENST00000537408 MED25Q71SY5 747 aa9.71□□□□□ -0.85
CLSTN3-207ENST00000537408 SLC35E3Q7Z769 313 aa9.71□□□□□ -0.85
CLSTN3-207ENST00000537408 OR4C5Q8NGB2 326 aa9.71□□□□□ -0.85
CLSTN3-207ENST00000537408 OR2D3Q8NGH3 330 aa9.71□□□□□ -0.85
CLSTN3-207ENST00000537408 ZNF700Q9H0M5 742 aa9.71□□□□□ -0.85
CLSTN3-207ENST00000537408 ADAP2Q9NPF8 381 aa9.71□□□□□ -0.85
CLSTN3-207ENST00000537408 MED31Q9Y3C7 131 aa9.71□□□□□ -0.85
CLSTN3-207ENST00000537408 PDCD11Q14690 1871 aaKnown RBP9.71□□□□□ -0.85
CLSTN3-207ENST00000537408 TSPAN2O60636 221 aa9.71□□□□□ -0.86
CLSTN3-207ENST00000537408 FCMRO60667 390 aa9.71□□□□□ -0.86
CLSTN3-207ENST00000537408 ZFPL1O95159 310 aa9.71□□□□□ -0.86
CLSTN3-207ENST00000537408 HPRT1P00492 218 aa9.71□□□□□ -0.86
CLSTN3-207ENST00000537408 MBPP02686 304 aaPredicted RBP9.71□□□□□ -0.86
CLSTN3-207ENST00000537408 ZGLP1P0C6A0 271 aa9.71□□□□□ -0.86
CLSTN3-207ENST00000537408 HLA-DQA1Q5Y7H0 255 aa9.71□□□□□ -0.86
CLSTN3-207ENST00000537408 PLXDC1Q8IUK5 500 aa9.71□□□□□ -0.86
CLSTN3-207ENST00000537408 OR6K6Q8NGW6 343 aa9.71□□□□□ -0.86
CLSTN3-207ENST00000537408 ARRDC3Q96B67 414 aa9.71□□□□□ -0.86
CLSTN3-207ENST00000537408 LMF1Q96S06 567 aa9.71□□□□□ -0.86
CLSTN3-207ENST00000537408 CKLFQ9UBR5 152 aa9.71□□□□□ -0.86
CLSTN3-207ENST00000537408 RBFOX3A6NFN3 312 aa9.7□□□□□ -0.86
CLSTN3-207ENST00000537408 MMP16P51512 607 aa9.7□□□□□ -0.86
CLSTN3-207ENST00000537408 EFNB2P52799 333 aa9.7□□□□□ -0.86
CLSTN3-207ENST00000537408 UCP2P55851 309 aa9.7□□□□□ -0.86
CLSTN3-207ENST00000537408 REEP5Q00765 189 aa9.7□□□□□ -0.86
CLSTN3-207ENST00000537408 SLC9A3R2Q15599 337 aa9.7□□□□□ -0.86
CLSTN3-207ENST00000537408 RSPO4Q2I0M5 234 aaPredicted RBP9.7□□□□□ -0.86
CLSTN3-207ENST00000537408 PRSS53Q2L4Q9 553 aa9.7□□□□□ -0.86
CLSTN3-207ENST00000537408 C1orf185Q5T7R7 199 aa9.7□□□□□ -0.86
CLSTN3-207ENST00000537408 OR56A1Q8NGH5 318 aa9.7□□□□□ -0.86
CLSTN3-207ENST00000537408 OR52E2Q8NGJ4 325 aa9.7□□□□□ -0.86
CLSTN3-207ENST00000537408 OR14L1PQ8NHC6 308 aa9.7□□□□□ -0.86
CLSTN3-207ENST00000537408 GPR119Q8TDV5 335 aa9.7□□□□□ -0.86
CLSTN3-207ENST00000537408 TMEM239Q8WW34 195 aa9.7□□□□□ -0.86
CLSTN3-207ENST00000537408 TMEM106AQ96A25 262 aa9.7□□□□□ -0.86
CLSTN3-207ENST00000537408 ZNF587Q96SQ5 575 aaPredicted RBP9.7□□□□□ -0.86
CLSTN3-207ENST00000537408 RSPO3Q9BXY4 272 aaPredicted RBP9.7□□□□□ -0.86
CLSTN3-207ENST00000537408 RAB22AQ9UL26 194 aa9.7□□□□□ -0.86
CLSTN3-207ENST00000537408 LATO43561 262 aa9.7□□□□□ -0.86
CLSTN3-207ENST00000537408 ZNF735P0CB33 412 aa9.7□□□□□ -0.86
CLSTN3-207ENST00000537408 SELEP16581 610 aa9.7□□□□□ -0.86
CLSTN3-207ENST00000537408 NCBP2P52298 156 aaKnown RBP eCLIP9.7□□□□□ -0.86
CLSTN3-207ENST00000537408 BTN3A2P78410 334 aa9.7□□□□□ -0.86
CLSTN3-207ENST00000537408 CDK3Q00526 305 aa9.7□□□□□ -0.86
CLSTN3-207ENST00000537408 TAF9Q16594 264 aa9.7□□□□□ -0.86
CLSTN3-207ENST00000537408 RFLNBQ8N5W9 214 aa9.7□□□□□ -0.86
CLSTN3-207ENST00000537408 NUDT11Q96G61 164 aa9.7□□□□□ -0.86
CLSTN3-207ENST00000537408 A0A0A6YYH2 397 aa9.7□□□□□ -0.86
CLSTN3-207ENST00000537408 A6NJ64 397 aa9.7□□□□□ -0.86
CLSTN3-207ENST00000537408 TBX19O60806 448 aa9.7□□□□□ -0.86
CLSTN3-207ENST00000537408 LCATP04180 440 aa9.7□□□□□ -0.86
CLSTN3-207ENST00000537408 PLA2G5P39877 138 aa9.7□□□□□ -0.86
CLSTN3-207ENST00000537408 SLC37A1P57057 533 aa9.7□□□□□ -0.86
CLSTN3-207ENST00000537408 TMEM183BQ1AE95 376 aa9.7□□□□□ -0.86
CLSTN3-207ENST00000537408 TMEM128Q5BJH2 165 aa9.7□□□□□ -0.86
CLSTN3-207ENST00000537408 OR51A7Q8NH64 312 aa9.7□□□□□ -0.86
CLSTN3-207ENST00000537408 SLC25A43Q8WUT9 341 aaPredicted RBP9.7□□□□□ -0.86
CLSTN3-207ENST00000537408 IL17FQ96PD4 163 aa9.7□□□□□ -0.86
CLSTN3-207ENST00000537408 PARD6GQ9BYG4 376 aaPredicted RBP9.7□□□□□ -0.86
CLSTN3-207ENST00000537408 USP36Q9P275 1121 aaKnown RBP9.7□□□□□ -0.86
CLSTN3-207ENST00000537408 HLA-DRB3P79483 266 aa9.7□□□□□ -0.86
CLSTN3-207ENST00000537408 FBXO42Q6P3S6 717 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms