RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 SFXN5Q8TD22 340 aa1.47□□□□□ -2.17
CCDC7-208ENST00000537047 RAB1CQ92928 201 aa1.47□□□□□ -2.17
CCDC7-208ENST00000537047 S100PBPQ96BU1 408 aa1.47□□□□□ -2.17
CCDC7-208ENST00000537047 C8orf44Q96CB5 159 aa1.47□□□□□ -2.17
CCDC7-208ENST00000537047 YIPF6Q96EC8 236 aa1.47□□□□□ -2.17
CCDC7-208ENST00000537047 DYNLL2Q96FJ2 89 aa1.47□□□□□ -2.17
CCDC7-208ENST00000537047 SNF8Q96H20 258 aa1.47□□□□□ -2.17
CCDC7-208ENST00000537047 ALS2CR12Q96Q35 445 aa1.47□□□□□ -2.17
CCDC7-208ENST00000537047 TGS1Q96RS0 853 aaKnown RBP1.47□□□□□ -2.17
CCDC7-208ENST00000537047 DSN1Q9H410 356 aa1.47□□□□□ -2.17
CCDC7-208ENST00000537047 PLEKHF2Q9H8W4 249 aa1.47□□□□□ -2.17
CCDC7-208ENST00000537047 ACP6Q9NPH0 428 aa1.47□□□□□ -2.17
CCDC7-208ENST00000537047 NINLQ9Y2I6 1382 aa1.47□□□□□ -2.17
CCDC7-208ENST00000537047 COL11A1P12107 1806 aaPredicted RBP1.46□□□□□ -2.18
CCDC7-208ENST00000537047 MYL12BO14950 172 aa1.46□□□□□ -2.18
CCDC7-208ENST00000537047 PTHP01270 115 aa1.46□□□□□ -2.18
CCDC7-208ENST00000537047 IGHG2P01859 326 aa1.46□□□□□ -2.18
CCDC7-208ENST00000537047 CBR1P16152 277 aa1.46□□□□□ -2.18
CCDC7-208ENST00000537047 OR12D2P58182 307 aa1.46□□□□□ -2.18
CCDC7-208ENST00000537047 HMGN5P82970 282 aaKnown RBP1.46□□□□□ -2.18
CCDC7-208ENST00000537047 FMODQ06828 376 aa1.46□□□□□ -2.18
CCDC7-208ENST00000537047 TRDNQ13061 729 aa1.46□□□□□ -2.18
CCDC7-208ENST00000537047 TRMT5Q32P41 509 aaKnown RBP1.46□□□□□ -2.18
CCDC7-208ENST00000537047 LIN9Q5TKA1 542 aa1.46□□□□□ -2.18
CCDC7-208ENST00000537047 ZNF470Q6ECI4 717 aa1.46□□□□□ -2.18
CCDC7-208ENST00000537047 TWF2Q6IBS0 349 aaKnown RBP1.46□□□□□ -2.18
CCDC7-208ENST00000537047 LRRC8AQ8IWT6 810 aa1.46□□□□□ -2.18
CCDC7-208ENST00000537047 RBPMSQ93062 196 aaKnown RBP1.46□□□□□ -2.18
CCDC7-208ENST00000537047 API5Q9BZZ5 524 aaKnown RBP1.46□□□□□ -2.18
CCDC7-208ENST00000537047 STX18Q9P2W9 335 aaKnown RBP1.46□□□□□ -2.18
CCDC7-208ENST00000537047 CES1P1Q9UKY3 287 aa1.46□□□□□ -2.18
CCDC7-208ENST00000537047 IGLV10-54A0A075B6I4 117 aa1.45□□□□□ -2.18
CCDC7-208ENST00000537047 LOC102724200A0A096LPH7 203 aaPredicted RBP1.45□□□□□ -2.18
CCDC7-208ENST00000537047 A0A0G2JMP0 313 aa1.45□□□□□ -2.18
CCDC7-208ENST00000537047 A0A0X1KG70 313 aa1.45□□□□□ -2.18
CCDC7-208ENST00000537047 IZUMO1RA6ND01 250 aa1.45□□□□□ -2.18
CCDC7-208ENST00000537047 SDHAF1A6NFY7 115 aa1.45□□□□□ -2.18
CCDC7-208ENST00000537047 C3orf84H3BNL1 204 aa1.45□□□□□ -2.18
CCDC7-208ENST00000537047 PSPHP1O15172 72 aa1.45□□□□□ -2.18
CCDC7-208ENST00000537047 CD160O95971 181 aa1.45□□□□□ -2.18
CCDC7-208ENST00000537047 RGS6P49758 472 aa1.45□□□□□ -2.18
CCDC7-208ENST00000537047 IL5RAQ01344 420 aa1.45□□□□□ -2.18
CCDC7-208ENST00000537047 ATP5G2Q06055 141 aa1.45□□□□□ -2.18
CCDC7-208ENST00000537047 CUL2Q13617 745 aa1.45□□□□□ -2.18
CCDC7-208ENST00000537047 LDLRAD2Q5SZI1 272 aa1.45□□□□□ -2.18
CCDC7-208ENST00000537047 MRPL2Q5T653 305 aaKnown RBP1.45□□□□□ -2.18
CCDC7-208ENST00000537047 MORN3Q6PF18 240 aaPredicted RBP1.45□□□□□ -2.18
CCDC7-208ENST00000537047 WDR59Q6PJI9 974 aa1.45□□□□□ -2.18
CCDC7-208ENST00000537047 SPNS3Q6ZMD2 512 aa1.45□□□□□ -2.18
CCDC7-208ENST00000537047 TRMT10CQ7L0Y3 403 aaKnown RBP1.45□□□□□ -2.18
CCDC7-208ENST00000537047 TCF24Q7RTU0 167 aa1.45□□□□□ -2.18
CCDC7-208ENST00000537047 UNC93AQ86WB7 457 aa1.45□□□□□ -2.18
CCDC7-208ENST00000537047 RNF10Q8N5U6 811 aaKnown RBP1.45□□□□□ -2.18
CCDC7-208ENST00000537047 ASZ1Q8WWH4 475 aa1.45□□□□□ -2.18
CCDC7-208ENST00000537047 MRPL48Q96GC5 212 aaKnown RBP1.45□□□□□ -2.18
CCDC7-208ENST00000537047 FAM192AQ9GZU8 254 aa1.45□□□□□ -2.18
CCDC7-208ENST00000537047 RBFOX1Q9NWB1 397 aaKnown RBP1.45□□□□□ -2.18
CCDC7-208ENST00000537047 CAB39Q9Y376 341 aaPredicted RBP1.45□□□□□ -2.18
CCDC7-208ENST00000537047 KIAA1671Q9BY89 1806 aa1.45□□□□□ -2.18
CCDC7-208ENST00000537047 LOXHD1Q8IVV2 1947 aa1.44□□□□□ -2.18
CCDC7-208ENST00000537047 KBTBD11-OT1A0A1B0GTJ5 212 aa1.44□□□□□ -2.18
CCDC7-208ENST00000537047 OR2F2O95006 317 aa1.44□□□□□ -2.18
CCDC7-208ENST00000537047 CPSF4O95639 269 aaKnown RBP1.44□□□□□ -2.18
CCDC7-208ENST00000537047 ADIGQ0VDE8 80 aa1.44□□□□□ -2.18
CCDC7-208ENST00000537047 KLHL40Q2TBA0 621 aa1.44□□□□□ -2.18
CCDC7-208ENST00000537047 LGALSLQ3ZCW2 172 aaPredicted RBP1.44□□□□□ -2.18
CCDC7-208ENST00000537047 PDZD11Q5EBL8 140 aa1.44□□□□□ -2.18
CCDC7-208ENST00000537047 LRRC66Q68CR7 880 aa1.44□□□□□ -2.18
CCDC7-208ENST00000537047 WDR82Q6UXN9 313 aa1.44□□□□□ -2.18
CCDC7-208ENST00000537047 ZYG11AQ6WRX3 759 aa1.44□□□□□ -2.18
CCDC7-208ENST00000537047 FA2HQ7L5A8 372 aa1.44□□□□□ -2.18
CCDC7-208ENST00000537047 RAB43Q86YS6 212 aa1.44□□□□□ -2.18
CCDC7-208ENST00000537047 SLC30A8Q8IWU4 369 aa1.44□□□□□ -2.18
CCDC7-208ENST00000537047 OR4D6Q8NGJ1 314 aa1.44□□□□□ -2.18
CCDC7-208ENST00000537047 MCUR1Q96AQ8 359 aa1.44□□□□□ -2.18
CCDC7-208ENST00000537047 CCDC77Q9BR77 488 aa1.44□□□□□ -2.18
CCDC7-208ENST00000537047 MS4A8Q9BY19 250 aa1.44□□□□□ -2.18
CCDC7-208ENST00000537047 VSIRQ9H7M9 311 aa1.44□□□□□ -2.18
CCDC7-208ENST00000537047 CCNB1IP1Q9NPC3 277 aa1.44□□□□□ -2.18
CCDC7-208ENST00000537047 PTTG3PQ9NZH4 202 aa1.44□□□□□ -2.18
CCDC7-208ENST00000537047 RCL1Q9Y2P8 373 aaKnown RBP1.44□□□□□ -2.18
CCDC7-208ENST00000537047 CACNA1GO43497 2377 aa1.43□□□□□ -2.18
CCDC7-208ENST00000537047 TMEM72A0PK05 275 aa1.43□□□□□ -2.18
CCDC7-208ENST00000537047 SNX4O95219 450 aa1.43□□□□□ -2.18
CCDC7-208ENST00000537047 PRPS1L1P21108 318 aa1.43□□□□□ -2.18
CCDC7-208ENST00000537047 STOMP27105 288 aa1.43□□□□□ -2.18
CCDC7-208ENST00000537047 OR1G1P47890 313 aa1.43□□□□□ -2.18
CCDC7-208ENST00000537047 SERPINB8P50452 374 aa1.43□□□□□ -2.18
CCDC7-208ENST00000537047 NUDT2P50583 147 aa1.43□□□□□ -2.18
CCDC7-208ENST00000537047 OR1Q1Q15612 314 aa1.43□□□□□ -2.18
CCDC7-208ENST00000537047 TMEM236Q5W0B7 351 aa1.43□□□□□ -2.18
CCDC7-208ENST00000537047 OR2T5Q6IEZ7 315 aa1.43□□□□□ -2.18
CCDC7-208ENST00000537047 METAP1DQ6UB28 335 aaPredicted RBP1.43□□□□□ -2.18
CCDC7-208ENST00000537047 SSX9Q7RTT3 188 aa1.43□□□□□ -2.18
CCDC7-208ENST00000537047 SCD5Q86SK9 330 aa1.43□□□□□ -2.18
CCDC7-208ENST00000537047 GABRG1Q8N1C3 465 aa1.43□□□□□ -2.18
CCDC7-208ENST00000537047 WDR31Q8NA23 367 aa1.43□□□□□ -2.18
CCDC7-208ENST00000537047 OR2T29Q8NH02 315 aa1.43□□□□□ -2.18
CCDC7-208ENST00000537047 OR8K3Q8NH51 312 aa1.43□□□□□ -2.18
CCDC7-208ENST00000537047 MUC7Q8TAX7 377 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms