RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 SPACA5Q96QH8 159 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 PDE7BQ9NP56 450 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 OR5AC2Q9NZP5 309 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 DOK5Q9P104 306 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 RNF150Q9ULK6 438 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 TMEM272A0A1B0GTI8 110 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 ZNF320A2RRD8 509 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 FIGNL2A6NMB9 653 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 F11P03951 625 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 LCATP04180 440 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 FCGR3AP08637 254 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 MUC1P15941 1255 aaPredicted RBP4.85□□□□□ -1.63
PTPRD-213ENST00000537002 AADACP22760 399 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 PLXDC2Q6UX71 529 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 THNSL2Q86YJ6 484 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 TGIF2LXQ8IUE1 241 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 EXD3Q8N9H8 876 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 MAFAQ8NHW3 353 aaPredicted RBP4.85□□□□□ -1.63
PTPRD-213ENST00000537002 ZNF845Q96IR2 970 aaPredicted RBP4.85□□□□□ -1.63
PTPRD-213ENST00000537002 PRRX2Q99811 253 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 PCED1AQ9H1Q7 454 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 FKRPQ9H9S5 495 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 SERTAD3Q9UJW9 196 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 PADI1Q9ULC6 663 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 LCTP09848 1927 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 TLCD2A6NGC4 264 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 E5RGE8 158 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 F6UZH7 168 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 EGR3Q06889 387 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 JOSD1Q15040 202 aaPredicted RBP4.85□□□□□ -1.63
PTPRD-213ENST00000537002 DUSP5Q16690 384 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 TRMT12Q53H54 448 aaKnown RBP4.85□□□□□ -1.63
PTPRD-213ENST00000537002 AADACL3Q5VUY0 350 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 RCBTB1Q8NDN9 531 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 WFDC5Q8TCV5 224 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 SLC25A38Q96DW6 304 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 ZDHHC11Q9H8X9 412 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 PRDM7Q9NQW5 492 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 SIRT3Q9NTG7 399 aaPredicted RBP4.85□□□□□ -1.63
PTPRD-213ENST00000537002 ZNF586Q9NXT0 402 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 NSG2Q9Y328 171 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 A0A1W2PNV4 684 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 CDC14CA4D256 554 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 SERINC4A6NH21 518 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 CTAG2O75638 210 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 SLC16A14Q7RTX9 510 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 NR2C2APQ86WQ0 139 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 OR8U1Q8NH10 309 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 NTNG2Q96CW9 530 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 ADGRL4Q9HBW9 690 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 DHCR7Q9UBM7 475 aaKnown RBP4.85□□□□□ -1.63
PTPRD-213ENST00000537002 PIAS3Q9Y6X2 628 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 VSTM2BA6NLU5 285 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 CDRT15L2A8MXV6 281 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 WNT11O96014 354 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 MT-CO2P00403 227 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 TNFP01375 233 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 PVRP15151 417 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 UCP2P55851 309 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 ZNF85Q03923 595 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 MALLQ13021 153 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 PLAC9Q5JTB6 97 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 BTNL8Q6UX41 500 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 SPNS3Q6ZMD2 512 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 OR4A4PQ8NGN8 299 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 LYPD6BQ8NI32 183 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 RPS4Y2Q8TD47 263 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 ZNF707Q96C28 371 aaPredicted RBP4.85□□□□□ -1.63
PTPRD-213ENST00000537002 MS4A10Q96PG2 267 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 TECTBQ96PL2 329 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 A0A1B0GTH9 108 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 C17orf112F2Z3M2 114 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 ONECUT2O95948 504 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 ADCYAP1P18509 176 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 PMCHP20382 165 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 NOVA1P51513 510 aaKnown RBP4.85□□□□□ -1.63
PTPRD-213ENST00000537002 EFNA3P52797 238 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 CNN3Q15417 329 aaKnown RBP4.85□□□□□ -1.63
PTPRD-213ENST00000537002 EMC4Q5J8M3 183 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 ASTLQ6HA08 431 aaPredicted RBP4.85□□□□□ -1.63
PTPRD-213ENST00000537002 PRSS35Q8N3Z0 413 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 BMFQ96LC9 184 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 UHRF2Q96PU4 802 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 RBM24Q9BX46 236 aaKnown RBP4.85□□□□□ -1.63
PTPRD-213ENST00000537002 COA3Q9Y2R0 106 aaPredicted RBP4.85□□□□□ -1.63
PTPRD-213ENST00000537002 CHD5Q8TDI0 1954 aa4.85□□□□□ -1.63
PTPRD-213ENST00000537002 CLDN34H7C241 214 aa4.84□□□□□ -1.63
PTPRD-213ENST00000537002 APBB3O95704 486 aa4.84□□□□□ -1.63
PTPRD-213ENST00000537002 CLDN1O95832 211 aa4.84□□□□□ -1.63
PTPRD-213ENST00000537002 CD22P20273 847 aa4.84□□□□□ -1.63
PTPRD-213ENST00000537002 MDKP21741 143 aaPredicted RBP4.84□□□□□ -1.63
PTPRD-213ENST00000537002 SLC25A1P53007 311 aa4.84□□□□□ -1.63
PTPRD-213ENST00000537002 ERVS71-1P61550 626 aa4.84□□□□□ -1.63
PTPRD-213ENST00000537002 SRPXP78539 464 aa4.84□□□□□ -1.63
PTPRD-213ENST00000537002 MESTQ5EB52 335 aa4.84□□□□□ -1.63
PTPRD-213ENST00000537002 ZNF542PQ5EBM4 170 aa4.84□□□□□ -1.63
PTPRD-213ENST00000537002 PLCXD3Q63HM9 321 aa4.84□□□□□ -1.63
PTPRD-213ENST00000537002 ZNF776Q68DI1 518 aaPredicted RBP4.84□□□□□ -1.63
PTPRD-213ENST00000537002 BRICD5Q6PL45 260 aa4.84□□□□□ -1.63
PTPRD-213ENST00000537002 BATF2Q8N1L9 274 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms