RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 ZNF735P0CB33 412 aa11.87□□□□□ -0.51
SMG6-203ENST00000536871 PRKACAP17612 351 aa11.87□□□□□ -0.51
SMG6-203ENST00000536871 OR3A4PP47883 348 aa11.87□□□□□ -0.51
SMG6-203ENST00000536871 HTR5AP47898 357 aa11.87□□□□□ -0.51
SMG6-203ENST00000536871 VAX1Q5SQQ9 334 aa11.87□□□□□ -0.51
SMG6-203ENST00000536871 GALNT16Q8N428 558 aa11.87□□□□□ -0.51
SMG6-203ENST00000536871 SUMF1Q8NBK3 374 aa11.87□□□□□ -0.51
SMG6-203ENST00000536871 TMEM178AQ8NBL3 297 aa11.87□□□□□ -0.51
SMG6-203ENST00000536871 MDS2Q8NDY4 140 aa11.87□□□□□ -0.51
SMG6-203ENST00000536871 OR2AK2Q8NG84 335 aa11.87□□□□□ -0.51
SMG6-203ENST00000536871 SGK3Q96BR1 496 aa11.87□□□□□ -0.51
SMG6-203ENST00000536871 REEP6Q96HR9 211 aa11.87□□□□□ -0.51
SMG6-203ENST00000536871 ALKBH3Q96Q83 286 aaPredicted RBP11.87□□□□□ -0.51
SMG6-203ENST00000536871 GAL3ST1Q99999 423 aa11.87□□□□□ -0.51
SMG6-203ENST00000536871 OCSTAMPQ9BR26 566 aa11.87□□□□□ -0.51
SMG6-203ENST00000536871 GLS2Q9UI32 602 aa11.87□□□□□ -0.51
SMG6-203ENST00000536871 ZNF587BE7ETH6 402 aa11.87□□□□□ -0.51
SMG6-203ENST00000536871 VSIG10L2P0DP72 767 aa11.87□□□□□ -0.51
SMG6-203ENST00000536871 TAS2R31P59538 309 aa11.87□□□□□ -0.51
SMG6-203ENST00000536871 UBE2MP61081 183 aaKnown RBP11.87□□□□□ -0.51
SMG6-203ENST00000536871 SPEM2Q0P670 501 aa11.87□□□□□ -0.51
SMG6-203ENST00000536871 SLC10A1Q14973 349 aa11.87□□□□□ -0.51
SMG6-203ENST00000536871 PXDC1Q5TGL8 231 aa11.87□□□□□ -0.51
SMG6-203ENST00000536871 LHFPL2Q6ZUX7 228 aa11.87□□□□□ -0.51
SMG6-203ENST00000536871 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.87□□□□□ -0.51
SMG6-203ENST00000536871 DTX1Q86Y01 620 aa11.87□□□□□ -0.51
SMG6-203ENST00000536871 TMEM251Q8N6I4 163 aa11.87□□□□□ -0.51
SMG6-203ENST00000536871 ZFP62Q8NB50 900 aaPredicted RBP11.87□□□□□ -0.51
SMG6-203ENST00000536871 DVL3Q92997 716 aaPredicted RBP11.87□□□□□ -0.51
SMG6-203ENST00000536871 NKX3-1Q99801 234 aaPredicted RBP11.87□□□□□ -0.51
SMG6-203ENST00000536871 PRRG4Q9BZD6 226 aa11.87□□□□□ -0.51
SMG6-203ENST00000536871 TINAGL1Q9GZM7 467 aaPredicted RBP11.87□□□□□ -0.51
SMG6-203ENST00000536871 PRDM14Q9GZV8 571 aa11.87□□□□□ -0.51
SMG6-203ENST00000536871 MYEF2Q9P2K5 600 aaKnown RBP11.87□□□□□ -0.51
SMG6-203ENST00000536871 LAMA1P25391 3075 aa11.86□□□□□ -0.51
SMG6-203ENST00000536871 HMSDA8MTL9 139 aa11.86□□□□□ -0.51
SMG6-203ENST00000536871 LCATP04180 440 aa11.86□□□□□ -0.51
SMG6-203ENST00000536871 OR4E1P0C645 316 aa11.86□□□□□ -0.51
SMG6-203ENST00000536871 B4GALT1P15291 398 aa11.86□□□□□ -0.51
SMG6-203ENST00000536871 FAHP16930 419 aa11.86□□□□□ -0.51
SMG6-203ENST00000536871 CXADRP78310 365 aa11.86□□□□□ -0.51
SMG6-203ENST00000536871 PSG4Q00888 419 aa11.86□□□□□ -0.51
SMG6-203ENST00000536871 CLLU1Q5K131 121 aa11.86□□□□□ -0.51
SMG6-203ENST00000536871 ZNF774Q6NX45 483 aa11.86□□□□□ -0.51
SMG6-203ENST00000536871 LINC00696Q6ZRV3 163 aa11.86□□□□□ -0.51
SMG6-203ENST00000536871 GALNTL5Q7Z4T8 443 aa11.86□□□□□ -0.51
SMG6-203ENST00000536871 TMEM17Q86X19 198 aa11.86□□□□□ -0.51
SMG6-203ENST00000536871 UXS1Q8NBZ7 420 aa11.86□□□□□ -0.51
SMG6-203ENST00000536871 ABHD3Q8WU67 409 aa11.86□□□□□ -0.51
SMG6-203ENST00000536871 ZNF837Q96EG3 531 aaPredicted RBP11.86□□□□□ -0.51
SMG6-203ENST00000536871 MRPS24Q96EL2 167 aaKnown RBP11.86□□□□□ -0.51
SMG6-203ENST00000536871 SOX7Q9BT81 388 aa11.86□□□□□ -0.51
SMG6-203ENST00000536871 POFUT1Q9H488 388 aa11.86□□□□□ -0.51
SMG6-203ENST00000536871 IL17BQ9UHF5 180 aa11.86□□□□□ -0.51
SMG6-203ENST00000536871 SDK2Q58EX2 2172 aa11.86□□□□□ -0.51
SMG6-203ENST00000536871 OR14I1A6ND48 311 aa11.85□□□□□ -0.51
SMG6-203ENST00000536871 FAM25EA8MYX2 175 aa11.85□□□□□ -0.51
SMG6-203ENST00000536871 F5H5P2 479 aa11.85□□□□□ -0.51
SMG6-203ENST00000536871 MFNGO00587 321 aa11.85□□□□□ -0.51
SMG6-203ENST00000536871 TOR1AO14656 332 aa11.85□□□□□ -0.51
SMG6-203ENST00000536871 IFNA7P01567 189 aa11.85□□□□□ -0.51
SMG6-203ENST00000536871 FCER2P06734 321 aa11.85□□□□□ -0.51
SMG6-203ENST00000536871 FCGR2AP12318 317 aa11.85□□□□□ -0.51
SMG6-203ENST00000536871 GNB3P16520 340 aa11.85□□□□□ -0.51
SMG6-203ENST00000536871 NTF4P34130 210 aa11.85□□□□□ -0.51
SMG6-203ENST00000536871 MAGEA5P43359 124 aa11.85□□□□□ -0.51
SMG6-203ENST00000536871 MEOX1P50221 254 aa11.85□□□□□ -0.51
SMG6-203ENST00000536871 PER3P56645 1201 aa11.85□□□□□ -0.51
SMG6-203ENST00000536871 TAS2R46P59540 309 aa11.85□□□□□ -0.51
SMG6-203ENST00000536871 S100A12P80511 92 aa11.85□□□□□ -0.51
SMG6-203ENST00000536871 FGL1Q08830 312 aa11.85□□□□□ -0.51
SMG6-203ENST00000536871 UBE2V2Q15819 145 aa11.85□□□□□ -0.51
SMG6-203ENST00000536871 SLC22A6Q4U2R8 563 aa11.85□□□□□ -0.51
SMG6-203ENST00000536871 TMEM42Q69YG0 159 aa11.85□□□□□ -0.51
SMG6-203ENST00000536871 LIN54Q6MZP7 749 aa11.85□□□□□ -0.51
SMG6-203ENST00000536871 IGF2-ASQ6U949 168 aa11.85□□□□□ -0.51
SMG6-203ENST00000536871 MCEMP1Q8IX19 187 aa11.85□□□□□ -0.51
SMG6-203ENST00000536871 MUC20Q8N307 709 aaPredicted RBP11.85□□□□□ -0.51
SMG6-203ENST00000536871 C12orf45Q8N5I9 185 aaPredicted RBP11.85□□□□□ -0.51
SMG6-203ENST00000536871 OR51T1Q8NGJ9 327 aa11.85□□□□□ -0.51
SMG6-203ENST00000536871 MS4A3Q96HJ5 214 aa11.85□□□□□ -0.51
SMG6-203ENST00000536871 ZNF845Q96IR2 970 aaPredicted RBP11.85□□□□□ -0.51
SMG6-203ENST00000536871 METTL9Q9H1A3 318 aa11.85□□□□□ -0.51
SMG6-203ENST00000536871 WNT5BQ9H1J7 359 aa11.85□□□□□ -0.51
SMG6-203ENST00000536871 OPA3Q9H6K4 179 aa11.85□□□□□ -0.51
SMG6-203ENST00000536871 ZMAT3Q9HA38 289 aaKnown RBP11.85□□□□□ -0.51
SMG6-203ENST00000536871 PIPOXQ9P0Z9 390 aa11.85□□□□□ -0.51
SMG6-203ENST00000536871 SLC7A11Q9UPY5 501 aa11.85□□□□□ -0.51
SMG6-203ENST00000536871 EML6Q6ZMW3 1958 aa11.85□□□□□ -0.51
SMG6-203ENST00000536871 M0QYG6 137 aa11.85□□□□□ -0.51
SMG6-203ENST00000536871 DBHP09172 617 aa11.85□□□□□ -0.51
SMG6-203ENST00000536871 MMP7P09237 267 aaPredicted RBP11.85□□□□□ -0.51
SMG6-203ENST00000536871 MGMTP16455 207 aa11.85□□□□□ -0.51
SMG6-203ENST00000536871 ARR3P36575 388 aa11.85□□□□□ -0.51
SMG6-203ENST00000536871 TSPAN5P62079 268 aa11.85□□□□□ -0.51
SMG6-203ENST00000536871 PPIAP62937 165 aaKnown RBP11.85□□□□□ -0.51
SMG6-203ENST00000536871 ATPAF1Q5TC12 328 aaPredicted RBP11.85□□□□□ -0.51
SMG6-203ENST00000536871 TMEM65Q6PI78 240 aa11.85□□□□□ -0.51
SMG6-203ENST00000536871 TEX261Q6UWH6 196 aa11.85□□□□□ -0.51
SMG6-203ENST00000536871 SLC25A42Q86VD7 318 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms