RNA–Protein interactions for RNA: ENST00000536797.5

LPCAT3-204, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 2

Gene LPCAT3, Length 1,412 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-204ENST00000536797 ZMYND11Q15326 602 aa17.65■□□□□ 0.42
LPCAT3-204ENST00000536797 TMEM155Q4W5P6 130 aa17.65■□□□□ 0.42
LPCAT3-204ENST00000536797 FDX2Q6P4F2 183 aa17.65■□□□□ 0.42
LPCAT3-204ENST00000536797 MUC20Q8N307 709 aaPredicted RBP17.65■□□□□ 0.42
LPCAT3-204ENST00000536797 SPICQ8N5J4 248 aa17.65■□□□□ 0.42
LPCAT3-204ENST00000536797 LINC01356Q8N9X3 169 aa17.65■□□□□ 0.42
LPCAT3-204ENST00000536797 CCDC54Q8NEL0 328 aa17.65■□□□□ 0.42
LPCAT3-204ENST00000536797 OR1M1Q8NGA1 313 aa17.65■□□□□ 0.42
LPCAT3-204ENST00000536797 OR5P3Q8WZ94 311 aa17.65■□□□□ 0.42
LPCAT3-204ENST00000536797 RNF166Q96A37 237 aaPredicted RBP17.65■□□□□ 0.42
LPCAT3-204ENST00000536797 C1orf159Q96HA4 380 aa17.65■□□□□ 0.42
LPCAT3-204ENST00000536797 ISG20L2Q9H9L3 353 aaKnown RBP17.65■□□□□ 0.42
LPCAT3-204ENST00000536797 C1orf123Q9NWV4 160 aa17.65■□□□□ 0.42
LPCAT3-204ENST00000536797 UBAP1Q9NZ09 502 aa17.65■□□□□ 0.42
LPCAT3-204ENST00000536797 RNF7Q9UBF6 113 aa17.65■□□□□ 0.42
LPCAT3-204ENST00000536797 PPIAL4EA0A075B759 164 aa17.64■□□□□ 0.42
LPCAT3-204ENST00000536797 PPIAL4DF5H284 164 aa17.64■□□□□ 0.42
LPCAT3-204ENST00000536797 IGHV2-5P01817 119 aa17.64■□□□□ 0.42
LPCAT3-204ENST00000536797 PPIAL4FP0DN26 164 aa17.64■□□□□ 0.42
LPCAT3-204ENST00000536797 MYL12AP19105 171 aa17.64■□□□□ 0.42
LPCAT3-204ENST00000536797 MDH2P40926 338 aaKnown RBP17.64■□□□□ 0.42
LPCAT3-204ENST00000536797 KIR3DL2P43630 455 aa17.64■□□□□ 0.42
LPCAT3-204ENST00000536797 CCR9P51686 369 aa17.64■□□□□ 0.42
LPCAT3-204ENST00000536797 CDH15P55291 814 aa17.64■□□□□ 0.42
LPCAT3-204ENST00000536797 ZNF154Q13106 437 aa17.64■□□□□ 0.42
LPCAT3-204ENST00000536797 MED21Q13503 144 aa17.64■□□□□ 0.42
LPCAT3-204ENST00000536797 TMEM244Q5VVB8 128 aa17.64■□□□□ 0.42
LPCAT3-204ENST00000536797 IZUMO2Q6UXV1 221 aa17.64■□□□□ 0.42
LPCAT3-204ENST00000536797 Q6ZSR3 168 aa17.64■□□□□ 0.42
LPCAT3-204ENST00000536797 KCTD8Q6ZWB6 473 aa17.64■□□□□ 0.42
LPCAT3-204ENST00000536797 WDR86Q86TI4 376 aa17.64■□□□□ 0.42
LPCAT3-204ENST00000536797 LRRC28Q86X40 367 aaPredicted RBP17.64■□□□□ 0.42
LPCAT3-204ENST00000536797 KLHL36Q8N4N3 616 aa17.64■□□□□ 0.42
LPCAT3-204ENST00000536797 HPSE2Q8WWQ2 592 aa17.64■□□□□ 0.42
LPCAT3-204ENST00000536797 TMEM80Q96HE8 168 aa17.64■□□□□ 0.42
LPCAT3-204ENST00000536797 PLEKHA1Q9HB21 404 aa17.64■□□□□ 0.42
LPCAT3-204ENST00000536797 FRRS1LQ9P0K9 344 aa17.64■□□□□ 0.42
LPCAT3-204ENST00000536797 PCDHB10Q9UN67 800 aa17.64■□□□□ 0.42
LPCAT3-204ENST00000536797 DIMT1Q9UNQ2 313 aaKnown RBP17.64■□□□□ 0.42
LPCAT3-204ENST00000536797 PPIAL4AQ9Y536 164 aa17.64■□□□□ 0.42
LPCAT3-204ENST00000536797 hCG_1807616A0A1W2PRN6 198 aa17.64■□□□□ 0.41
LPCAT3-204ENST00000536797 EFCAB10A6NFE3 127 aa17.64■□□□□ 0.41
LPCAT3-204ENST00000536797 TMEM210A6NLX4 147 aa17.64■□□□□ 0.41
LPCAT3-204ENST00000536797 A8MV72 311 aaPredicted RBP17.64■□□□□ 0.41
LPCAT3-204ENST00000536797 B4DSR2 109 aa17.64■□□□□ 0.41
LPCAT3-204ENST00000536797 H3BSH0 61 aa17.64■□□□□ 0.41
LPCAT3-204ENST00000536797 TGFAP01135 160 aa17.64■□□□□ 0.41
LPCAT3-204ENST00000536797 LIMS3P0CW19 117 aa17.64■□□□□ 0.41
LPCAT3-204ENST00000536797 LIMS4P0CW20 117 aa17.64■□□□□ 0.41
LPCAT3-204ENST00000536797 PIPP12273 146 aaPredicted RBP17.64■□□□□ 0.41
LPCAT3-204ENST00000536797 ZNF12P17014 697 aa17.64■□□□□ 0.41
LPCAT3-204ENST00000536797 HSPA13P48723 471 aa17.64■□□□□ 0.41
LPCAT3-204ENST00000536797 NANOS3P60323 173 aaKnown RBP17.64■□□□□ 0.41
LPCAT3-204ENST00000536797 CEACAM21Q3KPI0 293 aa17.64■□□□□ 0.41
LPCAT3-204ENST00000536797 CEP78Q5JTW2 689 aa17.64■□□□□ 0.41
LPCAT3-204ENST00000536797 PLCXD3Q63HM9 321 aa17.64■□□□□ 0.41
LPCAT3-204ENST00000536797 LAIR2Q6ISS4 152 aa17.64■□□□□ 0.41
LPCAT3-204ENST00000536797 FAM166AQ6J272 317 aa17.64■□□□□ 0.41
LPCAT3-204ENST00000536797 MOB3CQ70IA8 216 aa17.64■□□□□ 0.41
LPCAT3-204ENST00000536797 BPIFB6Q8NFQ5 453 aa17.64■□□□□ 0.41
LPCAT3-204ENST00000536797 HAVCR2Q8TDQ0 301 aa17.64■□□□□ 0.41
LPCAT3-204ENST00000536797 GGHQ92820 318 aa17.64■□□□□ 0.41
LPCAT3-204ENST00000536797 RNF170Q96K19 258 aa17.64■□□□□ 0.41
LPCAT3-204ENST00000536797 CHCHD3Q9NX63 227 aaKnown RBP17.64■□□□□ 0.41
LPCAT3-204ENST00000536797 CNOT2Q9NZN8 540 aaKnown RBP17.64■□□□□ 0.41
LPCAT3-204ENST00000536797 EXOSC1Q9Y3B2 195 aaKnown RBP17.64■□□□□ 0.41
LPCAT3-204ENST00000536797 HIVEP2P31629 2446 aa17.63■□□□□ 0.41
LPCAT3-204ENST00000536797 ABCA2Q9BZC7 2435 aa17.63■□□□□ 0.41
LPCAT3-204ENST00000536797 LOC107986453A0A1B0GWG9 222 aa17.63■□□□□ 0.41
LPCAT3-204ENST00000536797 FAM157AC9JC47 383 aa17.63■□□□□ 0.41
LPCAT3-204ENST00000536797 ZNF205O95201 554 aa17.63■□□□□ 0.41
LPCAT3-204ENST00000536797 FSTL3O95633 263 aa17.63■□□□□ 0.41
LPCAT3-204ENST00000536797 NRASP01111 189 aa17.63■□□□□ 0.41
LPCAT3-204ENST00000536797 THBS2P35442 1172 aa17.63■□□□□ 0.41
LPCAT3-204ENST00000536797 ETV1P50549 477 aa17.63■□□□□ 0.41
LPCAT3-204ENST00000536797 GBX2P52951 348 aaPredicted RBP17.63■□□□□ 0.41
LPCAT3-204ENST00000536797 ALKBH1Q13686 389 aaKnown RBP17.63■□□□□ 0.41
LPCAT3-204ENST00000536797 CLVS2Q5SYC1 327 aa17.63■□□□□ 0.41
LPCAT3-204ENST00000536797 TMPRSS11AQ6ZMR5 421 aa17.63■□□□□ 0.41
LPCAT3-204ENST00000536797 ZNF826PQ6ZT77 177 aa17.63■□□□□ 0.41
LPCAT3-204ENST00000536797 PLCXD1Q9NUJ7 323 aa17.63■□□□□ 0.41
LPCAT3-204ENST00000536797 KCNS2Q9ULS6 477 aa17.63■□□□□ 0.41
LPCAT3-204ENST00000536797 CAB39Q9Y376 341 aaPredicted RBP17.63■□□□□ 0.41
LPCAT3-204ENST00000536797 RRP15Q9Y3B9 282 aaKnown RBP17.63■□□□□ 0.41
LPCAT3-204ENST00000536797 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.62■□□□□ 0.414e-7■■■■■ 34.6
LPCAT3-204ENST00000536797 INAFM1C9JVW0 142 aa17.62■□□□□ 0.41
LPCAT3-204ENST00000536797 XPNPEP2O43895 674 aa17.62■□□□□ 0.41
LPCAT3-204ENST00000536797 ISG15P05161 165 aa17.62■□□□□ 0.41
LPCAT3-204ENST00000536797 GPM6AP51674 278 aa17.62■□□□□ 0.41
LPCAT3-204ENST00000536797 CSNK2BP67870 215 aa17.62■□□□□ 0.41
LPCAT3-204ENST00000536797 ST3GAL4Q11206 333 aa17.62■□□□□ 0.41
LPCAT3-204ENST00000536797 FAM201AQ5SY85 155 aa17.62■□□□□ 0.41
LPCAT3-204ENST00000536797 TMEM42Q69YG0 159 aa17.62■□□□□ 0.41
LPCAT3-204ENST00000536797 C11orf53Q8IXP5 236 aa17.62■□□□□ 0.41
LPCAT3-204ENST00000536797 RDH10Q8IZV5 341 aa17.62■□□□□ 0.41
LPCAT3-204ENST00000536797 OR5A2Q8NGI9 324 aa17.62■□□□□ 0.41
LPCAT3-204ENST00000536797 TLNRD1Q9H1K6 362 aa17.62■□□□□ 0.41
LPCAT3-204ENST00000536797 PSORS1C1Q9UIG5 152 aa17.62■□□□□ 0.41
LPCAT3-204ENST00000536797 A6NIN4 97 aa17.61■□□□□ 0.41
LPCAT3-204ENST00000536797 OR5B21A6NL26 309 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms