RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 LAMP5Q9UJQ1 280 aa10.96□□□□□ -0.65
CLSTN3-205ENST00000535452 A0A0U1RQK1 487 aa10.95□□□□□ -0.66
CLSTN3-205ENST00000535452 H0YAE9 185 aa10.95□□□□□ -0.66
CLSTN3-205ENST00000535452 CALB2P22676 271 aa10.95□□□□□ -0.66
CLSTN3-205ENST00000535452 GLRA1P23415 457 aa10.95□□□□□ -0.66
CLSTN3-205ENST00000535452 TGFBR2P37173 567 aa10.95□□□□□ -0.66
CLSTN3-205ENST00000535452 MAGEA2P43356 314 aa10.95□□□□□ -0.66
CLSTN3-205ENST00000535452 MAP2K3P46734 347 aa10.95□□□□□ -0.66
CLSTN3-205ENST00000535452 POU4F2Q12837 409 aa10.95□□□□□ -0.66
CLSTN3-205ENST00000535452 PRDX4Q13162 271 aa10.95□□□□□ -0.66
CLSTN3-205ENST00000535452 LCN1P1Q5VSP4 162 aa10.95□□□□□ -0.66
CLSTN3-205ENST00000535452 LCN8Q6JVE9 175 aa10.95□□□□□ -0.66
CLSTN3-205ENST00000535452 LYPD4Q6UWN0 246 aa10.95□□□□□ -0.66
CLSTN3-205ENST00000535452 WDR82Q6UXN9 313 aa10.95□□□□□ -0.66
CLSTN3-205ENST00000535452 LDLRAD3Q86YD5 345 aa10.95□□□□□ -0.66
CLSTN3-205ENST00000535452 OR8D4Q8NGM9 314 aa10.95□□□□□ -0.66
CLSTN3-205ENST00000535452 MROQ9BYG7 248 aa10.95□□□□□ -0.66
CLSTN3-205ENST00000535452 SIRPDQ9H106 197 aa10.95□□□□□ -0.66
CLSTN3-205ENST00000535452 RAB18Q9NP72 206 aa10.95□□□□□ -0.66
CLSTN3-205ENST00000535452 HAO2Q9NYQ3 351 aa10.95□□□□□ -0.66
CLSTN3-205ENST00000535452 SLC25A10Q9UBX3 287 aaPredicted RBP10.95□□□□□ -0.66
CLSTN3-205ENST00000535452 SF3B6Q9Y3B4 125 aaKnown RBP10.95□□□□□ -0.66
CLSTN3-205ENST00000535452 SOX21Q9Y651 276 aaPredicted RBP10.95□□□□□ -0.66
CLSTN3-205ENST00000535452 hCG_38984A0A1B0GV85 526 aa10.94□□□□□ -0.66
CLSTN3-205ENST00000535452 MEIOCA2RUB1 952 aa10.94□□□□□ -0.66
CLSTN3-205ENST00000535452 FAM183AA6NL82 134 aa10.94□□□□□ -0.66
CLSTN3-205ENST00000535452 ZNF850A8MQ14 1090 aa10.94□□□□□ -0.66
CLSTN3-205ENST00000535452 H3BUI4 141 aa10.94□□□□□ -0.66
CLSTN3-205ENST00000535452 PRODHO43272 600 aa10.94□□□□□ -0.66
CLSTN3-205ENST00000535452 MTRF1O75570 445 aaKnown RBP10.94□□□□□ -0.66
CLSTN3-205ENST00000535452 LHBP01229 141 aa10.94□□□□□ -0.66
CLSTN3-205ENST00000535452 IGHV4-59P01825 116 aa10.94□□□□□ -0.66
CLSTN3-205ENST00000535452 CLUP10909 449 aa10.94□□□□□ -0.66
CLSTN3-205ENST00000535452 MMP9P14780 707 aa10.94□□□□□ -0.66
CLSTN3-205ENST00000535452 ATP6V1B2P21281 511 aa10.94□□□□□ -0.66
CLSTN3-205ENST00000535452 IER3P46695 156 aa10.94□□□□□ -0.66
CLSTN3-205ENST00000535452 CBX1P83916 185 aa10.94□□□□□ -0.66
CLSTN3-205ENST00000535452 DBPQ10586 325 aaPredicted RBP10.94□□□□□ -0.66
CLSTN3-205ENST00000535452 PPP1R8Q12972 351 aaKnown RBP10.94□□□□□ -0.66
CLSTN3-205ENST00000535452 TAF9Q16594 264 aa10.94□□□□□ -0.66
CLSTN3-205ENST00000535452 C2orf68Q2NKX9 166 aa10.94□□□□□ -0.66
CLSTN3-205ENST00000535452 PDLIM3Q53GG5 364 aaPredicted RBP10.94□□□□□ -0.66
CLSTN3-205ENST00000535452 SLC35D3Q5M8T2 416 aa10.94□□□□□ -0.66
CLSTN3-205ENST00000535452 PLBD1Q6P4A8 553 aa10.94□□□□□ -0.66
CLSTN3-205ENST00000535452 METAP1DQ6UB28 335 aaPredicted RBP10.94□□□□□ -0.66
CLSTN3-205ENST00000535452 FAM216BQ8N7L0 139 aa10.94□□□□□ -0.66
CLSTN3-205ENST00000535452 OR5D13Q8NGL4 314 aa10.94□□□□□ -0.66
CLSTN3-205ENST00000535452 OR4Q3Q8NH05 313 aa10.94□□□□□ -0.66
CLSTN3-205ENST00000535452 CCDC124Q96CT7 223 aaKnown RBP10.94□□□□□ -0.66
CLSTN3-205ENST00000535452 DDOQ99489 341 aa10.94□□□□□ -0.66
CLSTN3-205ENST00000535452 FEVQ99581 238 aa10.94□□□□□ -0.66
CLSTN3-205ENST00000535452 METTL8Q9H825 291 aaKnown RBP10.94□□□□□ -0.66
CLSTN3-205ENST00000535452 SIRT7Q9NRC8 400 aa10.94□□□□□ -0.66
CLSTN3-205ENST00000535452 SNTG1Q9NSN8 517 aa10.94□□□□□ -0.66
CLSTN3-205ENST00000535452 VPREB3Q9UKI3 123 aa10.94□□□□□ -0.66
CLSTN3-205ENST00000535452 RHBDD3Q9Y3P4 386 aa10.94□□□□□ -0.66
CLSTN3-205ENST00000535452 TMEM14AQ9Y6G1 99 aa10.94□□□□□ -0.66
CLSTN3-205ENST00000535452 DOCK11Q5JSL3 2073 aa10.93□□□□□ -0.66
CLSTN3-205ENST00000535452 ZNF816-ZNF321PA0A0X1KG74 233 aa10.93□□□□□ -0.66
CLSTN3-205ENST00000535452 ARRDC5A6NEK1 342 aa10.93□□□□□ -0.66
CLSTN3-205ENST00000535452 NPFFO15130 113 aa10.93□□□□□ -0.66
CLSTN3-205ENST00000535452 CST4P01036 141 aa10.93□□□□□ -0.66
CLSTN3-205ENST00000535452 ATP6V1B1P15313 513 aa10.93□□□□□ -0.66
CLSTN3-205ENST00000535452 OPRL1P41146 370 aa10.93□□□□□ -0.66
CLSTN3-205ENST00000535452 LGALS4P56470 323 aa10.93□□□□□ -0.66
CLSTN3-205ENST00000535452 PSMA6P60900 246 aaKnown RBP10.93□□□□□ -0.66
CLSTN3-205ENST00000535452 GNG3P63215 75 aa10.93□□□□□ -0.66
CLSTN3-205ENST00000535452 CSNK2BP67870 215 aa10.93□□□□□ -0.66
CLSTN3-205ENST00000535452 ACSM1Q08AH1 577 aa10.93□□□□□ -0.66
CLSTN3-205ENST00000535452 ZNF829Q3KNS6 432 aaPredicted RBP10.93□□□□□ -0.66
CLSTN3-205ENST00000535452 ZNF770Q6IQ21 691 aaPredicted RBP10.93□□□□□ -0.66
CLSTN3-205ENST00000535452 CD300LDQ6UXZ3 194 aa10.93□□□□□ -0.66
CLSTN3-205ENST00000535452 Q6ZTK2 550 aa10.93□□□□□ -0.66
CLSTN3-205ENST00000535452 TMEM185AQ8NFB2 350 aa10.93□□□□□ -0.66
CLSTN3-205ENST00000535452 OR51G2Q8NGK0 314 aa10.93□□□□□ -0.66
CLSTN3-205ENST00000535452 OTOSQ8NHW6 89 aa10.93□□□□□ -0.66
CLSTN3-205ENST00000535452 ASB9Q96DX5 294 aa10.93□□□□□ -0.66
CLSTN3-205ENST00000535452 PKP2Q99959 881 aa10.93□□□□□ -0.66
CLSTN3-205ENST00000535452 DCTN5Q9BTE1 182 aa10.93□□□□□ -0.66
CLSTN3-205ENST00000535452 NMNAT2Q9BZQ4 307 aa10.93□□□□□ -0.66
CLSTN3-205ENST00000535452 PDP1Q9P0J1 537 aaPredicted RBP10.93□□□□□ -0.66
CLSTN3-205ENST00000535452 H2AFY2Q9P0M6 372 aaPredicted RBP10.93□□□□□ -0.66
CLSTN3-205ENST00000535452 NLKQ9UBE8 527 aa10.93□□□□□ -0.66
CLSTN3-205ENST00000535452 GTF2A1LQ9UNN4 478 aa10.93□□□□□ -0.66
CLSTN3-205ENST00000535452 TRBV23-1A0A0A0MS06 115 aa10.92□□□□□ -0.66
CLSTN3-205ENST00000535452 ACOD1A6NK06 481 aa10.92□□□□□ -0.66
CLSTN3-205ENST00000535452 OR5B21A6NL26 309 aa10.92□□□□□ -0.66
CLSTN3-205ENST00000535452 M0R1W7 72 aa10.92□□□□□ -0.66
CLSTN3-205ENST00000535452 SLC1A7O00341 560 aa10.92□□□□□ -0.66
CLSTN3-205ENST00000535452 ACOT8O14734 319 aa10.92□□□□□ -0.66
CLSTN3-205ENST00000535452 PEX14O75381 377 aa10.92□□□□□ -0.66
CLSTN3-205ENST00000535452 FAM107AO95990 144 aa10.92□□□□□ -0.66
CLSTN3-205ENST00000535452 ANXA8P13928 327 aa10.92□□□□□ -0.66
CLSTN3-205ENST00000535452 RIPPLY1Q0D2K3 151 aa10.92□□□□□ -0.66
CLSTN3-205ENST00000535452 GINS1Q14691 196 aa10.92□□□□□ -0.66
CLSTN3-205ENST00000535452 OCLNQ16625 522 aa10.92□□□□□ -0.66
CLSTN3-205ENST00000535452 C11orf88Q6PI97 169 aa10.92□□□□□ -0.66
CLSTN3-205ENST00000535452 FAM185AQ8N0U4 392 aa10.92□□□□□ -0.66
CLSTN3-205ENST00000535452 IQCF1Q8N6M8 205 aa10.92□□□□□ -0.66
CLSTN3-205ENST00000535452 CCDC197Q8NCU1 140 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms