RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 KLHDC2Q9Y2U9 406 aa17.01■□□□□ 0.31
SMPD1-210ENST00000534405 MYO15AQ9UKN7 3530 aa17.01■□□□□ 0.31
SMPD1-210ENST00000534405 SLC17A2O00624 439 aa17.01■□□□□ 0.31
SMPD1-210ENST00000534405 UPK3AO75631 287 aa17.01■□□□□ 0.31
SMPD1-210ENST00000534405 JTBO76095 146 aa17.01■□□□□ 0.31
SMPD1-210ENST00000534405 OR13C7P0DN81 318 aa17.01■□□□□ 0.31
SMPD1-210ENST00000534405 LMO1P25800 156 aa17.01■□□□□ 0.31
SMPD1-210ENST00000534405 NPY4RP50391 375 aa17.01■□□□□ 0.31
SMPD1-210ENST00000534405 ZNF627Q7L945 461 aa17.01■□□□□ 0.31
SMPD1-210ENST00000534405 THNSL2Q86YJ6 484 aa17.01■□□□□ 0.31
SMPD1-210ENST00000534405 ZNF584Q8IVC4 421 aa17.01■□□□□ 0.31
SMPD1-210ENST00000534405 PRSS58Q8IYP2 241 aa17.01■□□□□ 0.31
SMPD1-210ENST00000534405 JAGN1Q8N5M9 183 aa17.01■□□□□ 0.31
SMPD1-210ENST00000534405 MMABQ96EY8 250 aaPredicted RBP17.01■□□□□ 0.31
SMPD1-210ENST00000534405 RCC1LQ96I51 464 aaKnown RBP17.01■□□□□ 0.31
SMPD1-210ENST00000534405 SLC41A2Q96JW4 573 aa17.01■□□□□ 0.31
SMPD1-210ENST00000534405 PBDC1Q9BVG4 233 aa17.01■□□□□ 0.31
SMPD1-210ENST00000534405 RAB18Q9NP72 206 aa17.01■□□□□ 0.31
SMPD1-210ENST00000534405 TGIF2-C20orf24A0A0A6YYL0 155 aa17■□□□□ 0.31
SMPD1-210ENST00000534405 A0A1B0GW64 132 aa17■□□□□ 0.31
SMPD1-210ENST00000534405 CYB5BO43169 146 aa17■□□□□ 0.31
SMPD1-210ENST00000534405 NME2P1O60361 137 aa17■□□□□ 0.31
SMPD1-210ENST00000534405 NSA2O95478 260 aaKnown RBP17■□□□□ 0.31
SMPD1-210ENST00000534405 PET100P0DJ07 73 aa17■□□□□ 0.31
SMPD1-210ENST00000534405 CD37P11049 281 aa17■□□□□ 0.31
SMPD1-210ENST00000534405 RAB35Q15286 201 aa17■□□□□ 0.31
SMPD1-210ENST00000534405 CPEB4Q17RY0 729 aaKnown RBP eCLIP17■□□□□ 0.31
SMPD1-210ENST00000534405 SOHLH1Q5JUK2 328 aa17■□□□□ 0.31
SMPD1-210ENST00000534405 FAM166AQ6J272 317 aa17■□□□□ 0.31
SMPD1-210ENST00000534405 Q6ZS52 159 aa17■□□□□ 0.31
SMPD1-210ENST00000534405 OR4S1Q8NGB4 309 aa17■□□□□ 0.31
SMPD1-210ENST00000534405 GPX7Q96SL4 187 aaPredicted RBP17■□□□□ 0.31
SMPD1-210ENST00000534405 NELFAQ9H3P2 528 aa17■□□□□ 0.31
SMPD1-210ENST00000534405 PITPNC1Q9UKF7 332 aa17■□□□□ 0.31
SMPD1-210ENST00000534405 RPP14O95059 124 aaKnown RBP17■□□□□ 0.31
SMPD1-210ENST00000534405 TACSTD2P09758 323 aa17■□□□□ 0.31
SMPD1-210ENST00000534405 ZNF74Q16587 644 aa17■□□□□ 0.31
SMPD1-210ENST00000534405 FNDC7Q5VTL7 733 aa17■□□□□ 0.31
SMPD1-210ENST00000534405 ATG4DQ86TL0 474 aaPredicted RBP17■□□□□ 0.31
SMPD1-210ENST00000534405 LRRC75AQ8NAA5 344 aa17■□□□□ 0.31
SMPD1-210ENST00000534405 OR14K1Q8NGZ2 314 aa17■□□□□ 0.31
SMPD1-210ENST00000534405 OR51F2Q8NH61 342 aa17■□□□□ 0.31
SMPD1-210ENST00000534405 TMEM106AQ96A25 262 aa17■□□□□ 0.31
SMPD1-210ENST00000534405 ELOA3DA6NLF2 546 aaPredicted RBP16.99■□□□□ 0.31
SMPD1-210ENST00000534405 CCR4P51679 360 aa16.99■□□□□ 0.31
SMPD1-210ENST00000534405 TAS2R31P59538 309 aa16.99■□□□□ 0.31
SMPD1-210ENST00000534405 PRPS1P60891 318 aa16.99■□□□□ 0.31
SMPD1-210ENST00000534405 EGR4Q05215 589 aa16.99■□□□□ 0.31
SMPD1-210ENST00000534405 ELOA3BQ3SY89 546 aa16.99■□□□□ 0.31
SMPD1-210ENST00000534405 EXD3Q8N9H8 876 aa16.99■□□□□ 0.31
SMPD1-210ENST00000534405 SEMA6DQ8NFY4 1073 aa16.99■□□□□ 0.31
SMPD1-210ENST00000534405 ELOA3Q8NG57 546 aa16.99■□□□□ 0.31
SMPD1-210ENST00000534405 FAM174AQ8TBP5 190 aa16.99■□□□□ 0.31
SMPD1-210ENST00000534405 MCHR2Q969V1 340 aa16.99■□□□□ 0.31
SMPD1-210ENST00000534405 JSRP1Q96MG2 331 aaPredicted RBP16.99■□□□□ 0.31
SMPD1-210ENST00000534405 SMDT1Q9H4I9 107 aa16.99■□□□□ 0.31
SMPD1-210ENST00000534405 IL17BQ9UHF5 180 aa16.99■□□□□ 0.31
SMPD1-210ENST00000534405 SPEGQ15772 3267 aa16.99■□□□□ 0.31
SMPD1-210ENST00000534405 M0QZK8 103 aa16.99■□□□□ 0.31
SMPD1-210ENST00000534405 TP53I11O14683 189 aa16.99■□□□□ 0.31
SMPD1-210ENST00000534405 GGCTO75223 188 aaKnown RBP16.99■□□□□ 0.31
SMPD1-210ENST00000534405 TXNDC12O95881 172 aa16.99■□□□□ 0.31
SMPD1-210ENST00000534405 GCGP01275 180 aa16.99■□□□□ 0.31
SMPD1-210ENST00000534405 RPLP1P05386 114 aaKnown RBP16.99■□□□□ 0.31
SMPD1-210ENST00000534405 DANCRP0C864 163 aa16.99■□□□□ 0.31
SMPD1-210ENST00000534405 LTBRP36941 435 aa16.99■□□□□ 0.31
SMPD1-210ENST00000534405 GABRA4P48169 554 aa16.99■□□□□ 0.31
SMPD1-210ENST00000534405 HYAL4Q2M3T9 481 aa16.99■□□□□ 0.31
SMPD1-210ENST00000534405 PHF19Q5T6S3 580 aa16.99■□□□□ 0.31
SMPD1-210ENST00000534405 C10orf53Q8N6V4 93 aa16.99■□□□□ 0.31
SMPD1-210ENST00000534405 SHDQ96IW2 340 aa16.99■□□□□ 0.31
SMPD1-210ENST00000534405 HIF3AQ9Y2N7 669 aa16.99■□□□□ 0.31
SMPD1-210ENST00000534405 FBXO7Q9Y3I1 522 aa16.99■□□□□ 0.31
SMPD1-210ENST00000534405 THADAQ6YHU6 1953 aa16.98■□□□□ 0.31
SMPD1-210ENST00000534405 PCDH15Q96QU1 1955 aa16.98■□□□□ 0.31
SMPD1-210ENST00000534405 A0A1B0GTH9 108 aa16.98■□□□□ 0.31
SMPD1-210ENST00000534405 H7C1C5 153 aa16.98■□□□□ 0.31
SMPD1-210ENST00000534405 TGOLN2O43493 480 aa16.98■□□□□ 0.31
SMPD1-210ENST00000534405 CCR5P51681 352 aa16.98■□□□□ 0.31
SMPD1-210ENST00000534405 LCN6P62502 163 aa16.98■□□□□ 0.31
SMPD1-210ENST00000534405 RAB32Q13637 225 aa16.98■□□□□ 0.31
SMPD1-210ENST00000534405 FAM220AQ7Z4H9 259 aa16.98■□□□□ 0.31
SMPD1-210ENST00000534405 FOXRED2Q8IWF2 684 aa16.98■□□□□ 0.31
SMPD1-210ENST00000534405 TMEM183AQ8IXX5 376 aa16.98■□□□□ 0.31
SMPD1-210ENST00000534405 ZNF101Q8IZC7 436 aa16.98■□□□□ 0.31
SMPD1-210ENST00000534405 FAM160A2Q8N612 972 aaPredicted RBP16.98■□□□□ 0.31
SMPD1-210ENST00000534405 RNF128Q8TEB7 428 aa16.98■□□□□ 0.31
SMPD1-210ENST00000534405 PARP12Q9H0J9 701 aaKnown RBP16.98■□□□□ 0.31
SMPD1-210ENST00000534405 RXFP3Q9NSD7 469 aa16.98■□□□□ 0.31
SMPD1-210ENST00000534405 TAGLN2P37802 199 aaKnown RBP16.98■□□□□ 0.31
SMPD1-210ENST00000534405 GNALP38405 381 aa16.98■□□□□ 0.31
SMPD1-210ENST00000534405 GRK6P43250 576 aa16.98■□□□□ 0.31
SMPD1-210ENST00000534405 CTXN1P60606 82 aa16.98■□□□□ 0.31
SMPD1-210ENST00000534405 ZNF616Q08AN1 781 aa16.98■□□□□ 0.31
SMPD1-210ENST00000534405 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.98■□□□□ 0.31
SMPD1-210ENST00000534405 WBP2NLQ6ICG8 309 aa16.98■□□□□ 0.31
SMPD1-210ENST00000534405 RPUSD3Q6P087 351 aaKnown RBP16.98■□□□□ 0.31
SMPD1-210ENST00000534405 POMZP3Q6PJE2 187 aa16.98■□□□□ 0.31
SMPD1-210ENST00000534405 OPN5Q6U736 354 aa16.98■□□□□ 0.31
SMPD1-210ENST00000534405 SUMF2Q8NBJ7 301 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms