RNA–Protein interactions for RNA: ENST00000534172.1

CSMD3-210, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 5

Gene CSMD3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-210ENST00000534172 CHMP1BQ7LBR1 199 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 MOB3BQ86TA1 216 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 HOGA1Q86XE5 327 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 FBXO36Q8NEA4 188 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 FBXL13Q8NEE6 735 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 CYGBQ8WWM9 190 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 CREB3L1Q96BA8 519 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 CMTM5Q96DZ9 223 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 TSSK3Q96PN8 268 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 MBOAT4Q96T53 435 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 NIPSNAP1Q9BPW8 284 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 CMSS1Q9BQ75 279 aaKnown RBP2.92□□□□□ -1.94
CSMD3-210ENST00000534172 C7orf50Q9BRJ6 194 aaKnown RBP2.92□□□□□ -1.94
CSMD3-210ENST00000534172 ZNF426Q9BUY5 554 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 NAA50Q9GZZ1 169 aaKnown RBP2.92□□□□□ -1.94
CSMD3-210ENST00000534172 DCAF13Q9NV06 445 aaKnown RBP2.92□□□□□ -1.94
CSMD3-210ENST00000534172 DUS2Q9NX74 493 aaKnown RBP2.92□□□□□ -1.94
CSMD3-210ENST00000534172 ADA2Q9NZK5 511 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 POMPQ9Y244 141 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 TRAPPC4Q9Y296 219 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 SPTBN4Q9H254 2564 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 CD163L1Q9NR16 1453 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 A0A1W2PPV9 198 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 PRSS37A4D1T9 235 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 FABP12A6NFH5 140 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 PRAMEF26H0Y7S4 382 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 TNFSF12O43508 249 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 LRATO95237 230 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 CYB5R3P00387 301 aaPredicted RBP2.92□□□□□ -1.94
CSMD3-210ENST00000534172 IFNA21P01568 189 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 P04436 131 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 CFC1BP0CG36 223 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 CFC1P0CG37 223 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 BGNP21810 368 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 MAP2K4P45985 399 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 QARSP47897 775 aaKnown RBP2.92□□□□□ -1.94
CSMD3-210ENST00000534172 TAS2R39P59534 338 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 ERVS71-1P61550 626 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 RPS27AP62979 156 aaKnown RBP2.92□□□□□ -1.94
CSMD3-210ENST00000534172 ATXN7L3Q14CW9 347 aaPredicted RBP2.92□□□□□ -1.94
CSMD3-210ENST00000534172 TAF1AQ15573 450 aaPredicted RBP2.92□□□□□ -1.94
CSMD3-210ENST00000534172 GLYR1Q49A26 553 aaPredicted RBP2.92□□□□□ -1.94
CSMD3-210ENST00000534172 TMEM52BQ4KMG9 183 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 TP53I3Q53FA7 332 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 WDR59Q6PJI9 974 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 HACD2Q6Y1H2 254 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 FAM183BPQ6ZVS7 135 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 MRPL21Q7Z2W9 205 aaKnown RBP2.92□□□□□ -1.94
CSMD3-210ENST00000534172 PID1Q7Z2X4 250 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 ANKRD37Q7Z713 158 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 CMTM8Q8IZV2 173 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 LRRC75AQ8NAA5 344 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 CNIH3Q8TBE1 160 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 CDS1Q92903 461 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 ART4Q93070 314 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 BIRC7Q96CA5 298 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 TM4SF18Q96CE8 201 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 CMTM7Q96FZ5 175 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 OPRPNQ99935 248 aaPredicted RBP2.92□□□□□ -1.94
CSMD3-210ENST00000534172 GPR174Q9BXC1 333 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 ELOVL4Q9GZR5 314 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 NXF5Q9H1B4 397 aaKnown RBP2.92□□□□□ -1.94
CSMD3-210ENST00000534172 Q9HAA7 133 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 SMPXQ9UHP9 88 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 DKKL1Q9UK85 242 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 PSG11Q9UQ72 335 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 FBXO7Q9Y3I1 522 aa2.92□□□□□ -1.94
CSMD3-210ENST00000534172 ANKRD17O75179 2603 aaKnown RBP2.92□□□□□ -1.94
CSMD3-210ENST00000534172 CHD5Q8TDI0 1954 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 A0A0G2JND7 137 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 MGAT4DA6NG13 374 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 BTNL10A8MVZ5 291 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 G3V4G9 280 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 M0R143 59 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 PDCD5O14737 125 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 INPP4BO15327 924 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 AIREO43918 545 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 HPGDSO60760 199 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 SELEP16581 610 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 PGCP20142 388 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 MYL9P24844 172 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 SLC6A1P30531 599 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 CFHR2P36980 270 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 WNT4P56705 351 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 VSX2P58304 361 aaPredicted RBP2.91□□□□□ -1.94
CSMD3-210ENST00000534172 GABARAPL2P60520 117 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 CDC42P60953 191 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 SNRPD2P62316 118 aaKnown RBP2.91□□□□□ -1.94
CSMD3-210ENST00000534172 CYCSP99999 105 aaKnown RBP2.91□□□□□ -1.94
CSMD3-210ENST00000534172 EMX2Q04743 252 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 PNOCQ13519 176 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 VGLL4Q14135 290 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 FASTKQ14296 549 aaKnown RBP2.91□□□□□ -1.94
CSMD3-210ENST00000534172 NEDD8Q15843 81 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 NRF1Q16656 503 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 HLA-BQ31612 363 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 C18orf21Q32NC0 220 aaPredicted RBP2.91□□□□□ -1.94
CSMD3-210ENST00000534172 LY6G6FQ5SQ64 297 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 NXNL2Q5VZ03 156 aa2.91□□□□□ -1.94
CSMD3-210ENST00000534172 SNX29P2Q8IUI4 249 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms