RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 TMEM89A2RUT3 159 aa7.95□□□□□ -1.14
SSBP3-215ENST00000533946 LRRC30A6NM36 301 aa7.95□□□□□ -1.14
SSBP3-215ENST00000533946 ANKRD30BLA7E2S9 258 aa7.95□□□□□ -1.14
SSBP3-215ENST00000533946 F8VVB4 439 aa7.95□□□□□ -1.14
SSBP3-215ENST00000533946 F8VWA3 439 aa7.95□□□□□ -1.14
SSBP3-215ENST00000533946 P2RY10O00398 339 aa7.95□□□□□ -1.14
SSBP3-215ENST00000533946 SYNGR1O43759 233 aa7.95□□□□□ -1.14
SSBP3-215ENST00000533946 IRF2P14316 349 aa7.95□□□□□ -1.14
SSBP3-215ENST00000533946 PAICSP22234 425 aaKnown RBP7.95□□□□□ -1.14
SSBP3-215ENST00000533946 CFHR2P36980 270 aa7.95□□□□□ -1.14
SSBP3-215ENST00000533946 SLC15A1P46059 708 aa7.95□□□□□ -1.14
SSBP3-215ENST00000533946 GPM6AP51674 278 aa7.95□□□□□ -1.14
SSBP3-215ENST00000533946 CXCR4P61073 352 aa7.95□□□□□ -1.14
SSBP3-215ENST00000533946 KLRD1Q13241 179 aa7.95□□□□□ -1.14
SSBP3-215ENST00000533946 IKZF1Q13422 519 aa7.95□□□□□ -1.14
SSBP3-215ENST00000533946 DGUOKQ16854 277 aa7.95□□□□□ -1.14
SSBP3-215ENST00000533946 ZIK1Q3SY52 487 aaPredicted RBP7.95□□□□□ -1.14
SSBP3-215ENST00000533946 TEX36Q5VZQ5 186 aa7.95□□□□□ -1.14
SSBP3-215ENST00000533946 USP43Q70EL4 1123 aa7.95□□□□□ -1.14
SSBP3-215ENST00000533946 MEPCEQ7L2J0 689 aaKnown RBP7.95□□□□□ -1.14
SSBP3-215ENST00000533946 DOK3Q7L591 496 aa7.95□□□□□ -1.14
SSBP3-215ENST00000533946 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.95□□□□□ -1.14
SSBP3-215ENST00000533946 PIP4P2Q8N4L2 257 aa7.95□□□□□ -1.14
SSBP3-215ENST00000533946 Q8N7P7 452 aa7.95□□□□□ -1.14
SSBP3-215ENST00000533946 OR51G2Q8NGK0 314 aa7.95□□□□□ -1.14
SSBP3-215ENST00000533946 OR8S1Q8NH09 359 aa7.95□□□□□ -1.14
SSBP3-215ENST00000533946 TMEM163Q8TC26 289 aa7.95□□□□□ -1.14
SSBP3-215ENST00000533946 FAM216AQ8WUB2 273 aa7.95□□□□□ -1.14
SSBP3-215ENST00000533946 C17orf50Q8WW18 174 aa7.95□□□□□ -1.14
SSBP3-215ENST00000533946 ST8SIA4Q92187 359 aa7.95□□□□□ -1.14
SSBP3-215ENST00000533946 POP5Q969H6 163 aaKnown RBP7.95□□□□□ -1.14
SSBP3-215ENST00000533946 NRBF2Q96F24 287 aa7.95□□□□□ -1.14
SSBP3-215ENST00000533946 DUS3LQ96G46 650 aaKnown RBP7.95□□□□□ -1.14
SSBP3-215ENST00000533946 PLEKHA8Q96JA3 519 aa7.95□□□□□ -1.14
SSBP3-215ENST00000533946 RNF170Q96K19 258 aa7.95□□□□□ -1.14
SSBP3-215ENST00000533946 GAFA1Q96PS6 74 aa7.95□□□□□ -1.14
SSBP3-215ENST00000533946 GABARAPL1Q9H0R8 117 aa7.95□□□□□ -1.14
SSBP3-215ENST00000533946 TLNRD1Q9H1K6 362 aa7.95□□□□□ -1.14
SSBP3-215ENST00000533946 TOR3AQ9H497 397 aa7.95□□□□□ -1.14
SSBP3-215ENST00000533946 RIBC2Q9H4K1 309 aa7.95□□□□□ -1.14
SSBP3-215ENST00000533946 GPR173Q9NS66 373 aa7.95□□□□□ -1.14
SSBP3-215ENST00000533946 KIF17Q9P2E2 1029 aa7.95□□□□□ -1.14
SSBP3-215ENST00000533946 LAMP5Q9UJQ1 280 aa7.95□□□□□ -1.14
SSBP3-215ENST00000533946 IGKV1D-17A0A075B6S4 117 aa7.94□□□□□ -1.14
SSBP3-215ENST00000533946 TMEM269A0A1B0GVZ9 245 aa7.94□□□□□ -1.14
SSBP3-215ENST00000533946 ZNF732B4DXR9 585 aa7.94□□□□□ -1.14
SSBP3-215ENST00000533946 E9PQ18 207 aa7.94□□□□□ -1.14
SSBP3-215ENST00000533946 TMPRSS2O15393 492 aa7.94□□□□□ -1.14
SSBP3-215ENST00000533946 HOXA3O43365 443 aaPredicted RBP7.94□□□□□ -1.14
SSBP3-215ENST00000533946 INMTO95050 263 aa7.94□□□□□ -1.14
SSBP3-215ENST00000533946 RPP14O95059 124 aaKnown RBP7.94□□□□□ -1.14
SSBP3-215ENST00000533946 CST4P01036 141 aa7.94□□□□□ -1.14
SSBP3-215ENST00000533946 GATA3P23771 443 aa7.94□□□□□ -1.14
SSBP3-215ENST00000533946 FASP25445 335 aa7.94□□□□□ -1.14
SSBP3-215ENST00000533946 TGM4P49221 684 aa7.94□□□□□ -1.14
SSBP3-215ENST00000533946 BLVRAP53004 296 aa7.94□□□□□ -1.14
SSBP3-215ENST00000533946 KRTAP10-3P60369 221 aa7.94□□□□□ -1.14
SSBP3-215ENST00000533946 ACTG1P63261 375 aa7.94□□□□□ -1.14
SSBP3-215ENST00000533946 RELBQ01201 579 aa7.94□□□□□ -1.14
SSBP3-215ENST00000533946 ROM1Q03395 351 aa7.94□□□□□ -1.14
SSBP3-215ENST00000533946 BAMBIQ13145 260 aa7.94□□□□□ -1.14
SSBP3-215ENST00000533946 GK3PQ14409 553 aa7.94□□□□□ -1.14
SSBP3-215ENST00000533946 AWAT1Q58HT5 328 aa7.94□□□□□ -1.14
SSBP3-215ENST00000533946 SLC35D3Q5M8T2 416 aa7.94□□□□□ -1.14
SSBP3-215ENST00000533946 ZNF684Q5T5D7 378 aa7.94□□□□□ -1.14
SSBP3-215ENST00000533946 STUMQ69YW2 141 aa7.94□□□□□ -1.14
SSBP3-215ENST00000533946 ZNF322Q6U7Q0 402 aaPredicted RBP7.94□□□□□ -1.14
SSBP3-215ENST00000533946 MOB3CQ70IA8 216 aa7.94□□□□□ -1.14
SSBP3-215ENST00000533946 SLC35F2Q8IXU6 374 aa7.94□□□□□ -1.14
SSBP3-215ENST00000533946 RDH10Q8IZV5 341 aa7.94□□□□□ -1.14
SSBP3-215ENST00000533946 C1orf87Q8N0U7 546 aa7.94□□□□□ -1.14
SSBP3-215ENST00000533946 PRSS35Q8N3Z0 413 aa7.94□□□□□ -1.14
SSBP3-215ENST00000533946 GALNT4Q8N4A0 578 aa7.94□□□□□ -1.14
SSBP3-215ENST00000533946 ZNF454Q8N9F8 522 aa7.94□□□□□ -1.14
SSBP3-215ENST00000533946 OR52H1Q8NGJ2 320 aa7.94□□□□□ -1.14
SSBP3-215ENST00000533946 GCDHQ92947 438 aaPredicted RBP7.94□□□□□ -1.14
SSBP3-215ENST00000533946 LHX4Q969G2 390 aa7.94□□□□□ -1.14
SSBP3-215ENST00000533946 EME1Q96AY2 570 aa7.94□□□□□ -1.14
SSBP3-215ENST00000533946 MBOAT4Q96T53 435 aa7.94□□□□□ -1.14
SSBP3-215ENST00000533946 SLC29A1Q99808 456 aa7.94□□□□□ -1.14
SSBP3-215ENST00000533946 MRI1Q9BV20 369 aa7.94□□□□□ -1.14
SSBP3-215ENST00000533946 OSBPL10Q9BXB5 764 aa7.94□□□□□ -1.14
SSBP3-215ENST00000533946 YIPF3Q9GZM5 350 aa7.94□□□□□ -1.14
SSBP3-215ENST00000533946 OR51I2Q9H344 312 aa7.94□□□□□ -1.14
SSBP3-215ENST00000533946 NIPAL2Q9H841 368 aa7.94□□□□□ -1.14
SSBP3-215ENST00000533946 IKZF2Q9UKS7 526 aa7.94□□□□□ -1.14
SSBP3-215ENST00000533946 MAB21L2Q9Y586 359 aa7.94□□□□□ -1.14
SSBP3-215ENST00000533946 PCDHGB1Q9Y5G3 927 aa7.94□□□□□ -1.14
SSBP3-215ENST00000533946 IGKV1-27A0A075B6S5 117 aa7.93□□□□□ -1.14
SSBP3-215ENST00000533946 A0A0U1RQK1 487 aa7.93□□□□□ -1.14
SSBP3-215ENST00000533946 A0A1W2PQL4 384 aaPredicted RBP7.93□□□□□ -1.14
SSBP3-215ENST00000533946 MEGF11A6BM72 1044 aa7.93□□□□□ -1.14
SSBP3-215ENST00000533946 SRRM5B3KS81 715 aa7.93□□□□□ -1.14
SSBP3-215ENST00000533946 IFNL4K9M1U5 179 aa7.93□□□□□ -1.14
SSBP3-215ENST00000533946 HAX1O00165 279 aa7.93□□□□□ -1.14
SSBP3-215ENST00000533946 PHYHO14832 338 aa7.93□□□□□ -1.14
SSBP3-215ENST00000533946 FSTL3O95633 263 aa7.93□□□□□ -1.14
SSBP3-215ENST00000533946 CALCBP10092 127 aa7.93□□□□□ -1.14
SSBP3-215ENST00000533946 KIR3DL2P43630 455 aa7.93□□□□□ -1.14
SSBP3-215ENST00000533946 ESRRGP62508 458 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms