RNA–Protein interactions for RNA: ENST00000533595.5

SF3B2-214, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5

Gene SF3B2, Length 1,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-214ENST00000533595 CLDN25C9JDP6 229 aa12.32□□□□□ -0.44
SF3B2-214ENST00000533595 RNF223E7ERA6 249 aa12.32□□□□□ -0.44
SF3B2-214ENST00000533595 H7C1Q1 480 aa12.32□□□□□ -0.44
SF3B2-214ENST00000533595 IFNL4K9M1U5 179 aa12.32□□□□□ -0.44
SF3B2-214ENST00000533595 PPIHO43447 177 aaKnown RBP12.32□□□□□ -0.44
SF3B2-214ENST00000533595 RGS10O43665 173 aa12.32□□□□□ -0.44
SF3B2-214ENST00000533595 RPSAP08865 295 aaKnown RBP12.32□□□□□ -0.44
SF3B2-214ENST00000533595 GATA4P43694 442 aa12.32□□□□□ -0.44
SF3B2-214ENST00000533595 GPR6P46095 362 aaPredicted RBP12.32□□□□□ -0.44
SF3B2-214ENST00000533595 WNT4P56705 351 aa12.32□□□□□ -0.44
SF3B2-214ENST00000533595 SLC3A1Q07837 685 aa12.32□□□□□ -0.44
SF3B2-214ENST00000533595 CDK5R1Q15078 307 aa12.32□□□□□ -0.44
SF3B2-214ENST00000533595 XAF1Q6GPH4 301 aa12.32□□□□□ -0.44
SF3B2-214ENST00000533595 MOGAT3Q86VF5 341 aa12.32□□□□□ -0.44
SF3B2-214ENST00000533595 ZDHHC23Q8IYP9 409 aa12.32□□□□□ -0.44
SF3B2-214ENST00000533595 ZNF485Q8NCK3 441 aa12.32□□□□□ -0.44
SF3B2-214ENST00000533595 OR5AK2Q8NH90 309 aa12.32□□□□□ -0.44
SF3B2-214ENST00000533595 ERGIC1Q969X5 290 aa12.32□□□□□ -0.44
SF3B2-214ENST00000533595 ITPKCQ96DU7 683 aa12.32□□□□□ -0.44
SF3B2-214ENST00000533595 HIST1H2AAQ96QV6 131 aa12.32□□□□□ -0.44
SF3B2-214ENST00000533595 MICU1Q9BPX6 476 aa12.32□□□□□ -0.44
SF3B2-214ENST00000533595 RTL8AQ9BWD3 113 aa12.32□□□□□ -0.44
SF3B2-214ENST00000533595 MND1Q9BWT6 205 aa12.32□□□□□ -0.44
SF3B2-214ENST00000533595 COMMD4Q9H0A8 199 aa12.32□□□□□ -0.44
SF3B2-214ENST00000533595 TMEM106BQ9NUM4 274 aa12.32□□□□□ -0.44
SF3B2-214ENST00000533595 HHLA2Q9UM44 414 aa12.32□□□□□ -0.44
SF3B2-214ENST00000533595 DYSFO75923 2080 aa12.32□□□□□ -0.44
SF3B2-214ENST00000533595 TANC2Q9HCD6 1990 aa12.31□□□□□ -0.44
SF3B2-214ENST00000533595 LOC100289279A0A1B0GTE1 492 aa12.31□□□□□ -0.44
SF3B2-214ENST00000533595 OGG1O15527 345 aa12.31□□□□□ -0.44
SF3B2-214ENST00000533595 ZFPL1O95159 310 aa12.31□□□□□ -0.44
SF3B2-214ENST00000533595 PTBP3O95758 552 aaKnown RBP12.31□□□□□ -0.44
SF3B2-214ENST00000533595 LALBAP00709 142 aa12.31□□□□□ -0.44
SF3B2-214ENST00000533595 NRASP01111 189 aa12.31□□□□□ -0.44
SF3B2-214ENST00000533595 GRPP07492 148 aa12.31□□□□□ -0.44
SF3B2-214ENST00000533595 CD99P14209 185 aa12.31□□□□□ -0.44
SF3B2-214ENST00000533595 CDH15P55291 814 aa12.31□□□□□ -0.44
SF3B2-214ENST00000533595 CLVS2Q5SYC1 327 aa12.31□□□□□ -0.44
SF3B2-214ENST00000533595 PRAMEF6Q5VXH4 476 aa12.31□□□□□ -0.44
SF3B2-214ENST00000533595 MOB3CQ70IA8 216 aa12.31□□□□□ -0.44
SF3B2-214ENST00000533595 CIARTQ8N365 385 aaPredicted RBP12.31□□□□□ -0.44
SF3B2-214ENST00000533595 OR5P3Q8WZ94 311 aa12.31□□□□□ -0.44
SF3B2-214ENST00000533595 TIMD4Q96H15 378 aa12.31□□□□□ -0.44
SF3B2-214ENST00000533595 RNF170Q96K19 258 aa12.31□□□□□ -0.44
SF3B2-214ENST00000533595 PDCD1LG2Q9BQ51 273 aa12.31□□□□□ -0.44
SF3B2-214ENST00000533595 TMUB1Q9BVT8 246 aa12.31□□□□□ -0.44
SF3B2-214ENST00000533595 FN3KRPQ9HA64 309 aa12.31□□□□□ -0.44
SF3B2-214ENST00000533595 UFSP2Q9NUQ7 469 aa12.31□□□□□ -0.44
SF3B2-214ENST00000533595 A6NIN4 97 aa12.3□□□□□ -0.44
SF3B2-214ENST00000533595 LRRC30A6NM36 301 aa12.3□□□□□ -0.44
SF3B2-214ENST00000533595 LMX1BO60663 402 aa12.3□□□□□ -0.44
SF3B2-214ENST00000533595 MT-ND2P03891 347 aa12.3□□□□□ -0.44
SF3B2-214ENST00000533595 USF1P22415 310 aaPredicted RBP12.3□□□□□ -0.44
SF3B2-214ENST00000533595 EEF1B2P24534 225 aaKnown RBP12.3□□□□□ -0.44
SF3B2-214ENST00000533595 TAS2R43P59537 309 aa12.3□□□□□ -0.44
SF3B2-214ENST00000533595 IRF3Q14653 427 aa12.3□□□□□ -0.44
SF3B2-214ENST00000533595 MPPED2Q15777 294 aa12.3□□□□□ -0.44
SF3B2-214ENST00000533595 ZNF181Q2M3W8 571 aa12.3□□□□□ -0.44
SF3B2-214ENST00000533595 CEACAM21Q3KPI0 293 aa12.3□□□□□ -0.44
SF3B2-214ENST00000533595 CEP78Q5JTW2 689 aa12.3□□□□□ -0.44
SF3B2-214ENST00000533595 PLCXD3Q63HM9 321 aa12.3□□□□□ -0.44
SF3B2-214ENST00000533595 TMEM42Q69YG0 159 aa12.3□□□□□ -0.44
SF3B2-214ENST00000533595 PRSS48Q7RTY5 328 aa12.3□□□□□ -0.44
SF3B2-214ENST00000533595 PEG10Q86TG7 708 aaKnown RBP12.3□□□□□ -0.44
SF3B2-214ENST00000533595 OR1M1Q8NGA1 313 aa12.3□□□□□ -0.44
SF3B2-214ENST00000533595 OR51A4Q8NGJ6 313 aa12.3□□□□□ -0.44
SF3B2-214ENST00000533595 OR13C3Q8NGS6 347 aa12.3□□□□□ -0.44
SF3B2-214ENST00000533595 OR11L1Q8NGX0 322 aa12.3□□□□□ -0.44
SF3B2-214ENST00000533595 OR10AC1Q8NH08 325 aa12.3□□□□□ -0.44
SF3B2-214ENST00000533595 ZNF420Q8TAQ5 688 aaPredicted RBP12.3□□□□□ -0.44
SF3B2-214ENST00000533595 Q8TCH9 128 aa12.3□□□□□ -0.44
SF3B2-214ENST00000533595 RPS4Y2Q8TD47 263 aa12.3□□□□□ -0.44
SF3B2-214ENST00000533595 HPSE2Q8WWQ2 592 aa12.3□□□□□ -0.44
SF3B2-214ENST00000533595 HPS1Q92902 700 aa12.3□□□□□ -0.44
SF3B2-214ENST00000533595 RAB1CQ92928 201 aa12.3□□□□□ -0.44
SF3B2-214ENST00000533595 C10orf35Q96D05 121 aa12.3□□□□□ -0.44
SF3B2-214ENST00000533595 C18orf12Q96KH6 178 aa12.3□□□□□ -0.44
SF3B2-214ENST00000533595 COX4I2Q96KJ9 171 aa12.3□□□□□ -0.44
SF3B2-214ENST00000533595 CCDC90BQ9GZT6 254 aa12.3□□□□□ -0.44
SF3B2-214ENST00000533595 DCAF16Q9NXF7 216 aa12.3□□□□□ -0.44
SF3B2-214ENST00000533595 SIRT4Q9Y6E7 314 aaPredicted RBP12.3□□□□□ -0.44
SF3B2-214ENST00000533595 A0A096LNT2 108 aa12.29□□□□□ -0.44
SF3B2-214ENST00000533595 ANKRD61A6NGH8 418 aa12.29□□□□□ -0.44
SF3B2-214ENST00000533595 A6NLC8 198 aa12.29□□□□□ -0.44
SF3B2-214ENST00000533595 TMEM210A6NLX4 147 aa12.29□□□□□ -0.44
SF3B2-214ENST00000533595 TMEM178BH3BS89 294 aa12.29□□□□□ -0.44
SF3B2-214ENST00000533595 SMAD7O15105 426 aaKnown RBP12.29□□□□□ -0.44
SF3B2-214ENST00000533595 IRF2P14316 349 aa12.29□□□□□ -0.44
SF3B2-214ENST00000533595 PMELP40967 661 aa12.29□□□□□ -0.44
SF3B2-214ENST00000533595 GNG3P63215 75 aa12.29□□□□□ -0.44
SF3B2-214ENST00000533595 LOXL1Q08397 574 aaPredicted RBP12.29□□□□□ -0.44
SF3B2-214ENST00000533595 HNRNPA0Q13151 305 aaKnown RBP12.29□□□□□ -0.44
SF3B2-214ENST00000533595 AVPI1Q5T686 147 aa12.29□□□□□ -0.44
SF3B2-214ENST00000533595 DMKNQ6E0U4 476 aaPredicted RBP12.29□□□□□ -0.44
SF3B2-214ENST00000533595 KCTD8Q6ZWB6 473 aa12.29□□□□□ -0.44
SF3B2-214ENST00000533595 WDR86Q86TI4 376 aa12.29□□□□□ -0.44
SF3B2-214ENST00000533595 C1orf87Q8N0U7 546 aa12.29□□□□□ -0.44
SF3B2-214ENST00000533595 OR5A2Q8NGI9 324 aa12.29□□□□□ -0.44
SF3B2-214ENST00000533595 PP6455Q8WZ26 134 aa12.29□□□□□ -0.44
SF3B2-214ENST00000533595 FGGYQ96C11 551 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms