RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 SNU13P55769 128 aaKnown RBP14.65□□□□□ -0.06
CTSB-228ENST00000533455 OR1D5P58170 312 aa14.65□□□□□ -0.06
CTSB-228ENST00000533455 CSNK2A1P68400 391 aaPredicted RBP14.65□□□□□ -0.06
CTSB-228ENST00000533455 CFHR1Q03591 330 aa14.65□□□□□ -0.06
CTSB-228ENST00000533455 MYBPHQ13203 477 aa14.65□□□□□ -0.06
CTSB-228ENST00000533455 CSNK2A3Q8NEV1 391 aa14.65□□□□□ -0.06
CTSB-228ENST00000533455 OR14K1Q8NGZ2 314 aa14.65□□□□□ -0.06
CTSB-228ENST00000533455 RLN3Q8WXF3 142 aa14.65□□□□□ -0.06
CTSB-228ENST00000533455 GPER1Q99527 375 aa14.65□□□□□ -0.06
CTSB-228ENST00000533455 EHFQ9NZC4 300 aa14.65□□□□□ -0.06
CTSB-228ENST00000533455 ATPIF1Q9UII2 106 aa14.65□□□□□ -0.06
CTSB-228ENST00000533455 IGHV1OR21-1A0A087WYE8 117 aa14.64□□□□□ -0.07
CTSB-228ENST00000533455 IGHV1OR15-9A0A0B4J2B8 117 aa14.64□□□□□ -0.07
CTSB-228ENST00000533455 IGHV3-20A0A0C4DH32 117 aa14.64□□□□□ -0.07
CTSB-228ENST00000533455 SHISA8B8ZZ34 492 aa14.64□□□□□ -0.07
CTSB-228ENST00000533455 FAM157AC9JC47 383 aa14.64□□□□□ -0.07
CTSB-228ENST00000533455 HTR3BO95264 441 aa14.64□□□□□ -0.07
CTSB-228ENST00000533455 CST4P01036 141 aa14.64□□□□□ -0.07
CTSB-228ENST00000533455 DHPSP49366 369 aaPredicted RBP14.64□□□□□ -0.07
CTSB-228ENST00000533455 S100A10P60903 97 aa14.64□□□□□ -0.07
CTSB-228ENST00000533455 NFAM1Q8NET5 270 aaPredicted RBP14.64□□□□□ -0.07
CTSB-228ENST00000533455 POC1BQ8TC44 478 aa14.64□□□□□ -0.07
CTSB-228ENST00000533455 USB1Q9BQ65 265 aaKnown RBP14.64□□□□□ -0.07
CTSB-228ENST00000533455 CNTNAP3Q9BZ76 1288 aa14.64□□□□□ -0.07
CTSB-228ENST00000533455 LHX6Q9UPM6 363 aa14.64□□□□□ -0.07
CTSB-228ENST00000533455 COLCA2A8K830 154 aa14.63□□□□□ -0.07
CTSB-228ENST00000533455 IGLV3-1P01715 115 aa14.63□□□□□ -0.07
CTSB-228ENST00000533455 HOXB5P09067 269 aa14.63□□□□□ -0.07
CTSB-228ENST00000533455 ZNF708P17019 499 aa14.63□□□□□ -0.07
CTSB-228ENST00000533455 ADH6P28332 368 aa14.63□□□□□ -0.07
CTSB-228ENST00000533455 MSX1P28360 303 aa14.63□□□□□ -0.07
CTSB-228ENST00000533455 PTGER4P35408 488 aa14.63□□□□□ -0.07
CTSB-228ENST00000533455 ECI1P42126 302 aa14.63□□□□□ -0.07
CTSB-228ENST00000533455 MEOX2P50222 304 aa14.63□□□□□ -0.07
CTSB-228ENST00000533455 MFAP5Q13361 173 aa14.63□□□□□ -0.07
CTSB-228ENST00000533455 PEA15Q15121 130 aa14.63□□□□□ -0.07
CTSB-228ENST00000533455 PLPPR5Q32ZL2 321 aa14.63□□□□□ -0.07
CTSB-228ENST00000533455 CRIP3Q6Q6R5 217 aa14.63□□□□□ -0.07
CTSB-228ENST00000533455 PNLDC1Q8NA58 520 aaKnown RBP14.63□□□□□ -0.07
CTSB-228ENST00000533455 OR51T1Q8NGJ9 327 aa14.63□□□□□ -0.07
CTSB-228ENST00000533455 CPNE2Q96FN4 548 aaPredicted RBP14.63□□□□□ -0.07
CTSB-228ENST00000533455 CMSS1Q9BQ75 279 aaKnown RBP14.63□□□□□ -0.07
CTSB-228ENST00000533455 ST6GALNAC5Q9BVH7 336 aa14.63□□□□□ -0.07
CTSB-228ENST00000533455 PECRQ9BY49 303 aa14.63□□□□□ -0.07
CTSB-228ENST00000533455 TGIF2Q9GZN2 237 aa14.63□□□□□ -0.07
CTSB-228ENST00000533455 CHRDQ9H2X0 955 aa14.63□□□□□ -0.07
CTSB-228ENST00000533455 SLC22A11Q9NSA0 550 aa14.63□□□□□ -0.07
CTSB-228ENST00000533455 ASH2LQ9UBL3 628 aa14.63□□□□□ -0.07
CTSB-228ENST00000533455 PCDHGA1Q9Y5H4 931 aa14.63□□□□□ -0.07
CTSB-228ENST00000533455 IGLV3-32A0A0A0MS00 114 aa14.63□□□□□ -0.07
CTSB-228ENST00000533455 SERPINE3A8MV23 424 aa14.63□□□□□ -0.07
CTSB-228ENST00000533455 SDCBPO00560 298 aaPredicted RBP14.63□□□□□ -0.07
CTSB-228ENST00000533455 APOC1P02654 83 aa14.63□□□□□ -0.07
CTSB-228ENST00000533455 HPNP05981 417 aa14.63□□□□□ -0.07
CTSB-228ENST00000533455 NAT2P11245 290 aa14.63□□□□□ -0.07
CTSB-228ENST00000533455 RCC1P18754 421 aaPredicted RBP14.63□□□□□ -0.07
CTSB-228ENST00000533455 NME2P22392 152 aa14.63□□□□□ -0.07
CTSB-228ENST00000533455 CDAP32320 146 aa14.63□□□□□ -0.07
CTSB-228ENST00000533455 ZNF41P51814 821 aaPredicted RBP14.63□□□□□ -0.07
CTSB-228ENST00000533455 F2RL1P55085 397 aa14.63□□□□□ -0.07
CTSB-228ENST00000533455 GRB2P62993 217 aaKnown RBP14.63□□□□□ -0.07
CTSB-228ENST00000533455 ECH1Q13011 328 aa14.63□□□□□ -0.07
CTSB-228ENST00000533455 RBM39Q14498 530 aaKnown RBP14.63□□□□□ -0.07
CTSB-228ENST00000533455 ARL6IP1Q15041 203 aa14.63□□□□□ -0.07
CTSB-228ENST00000533455 PPA1Q15181 289 aa14.63□□□□□ -0.07
CTSB-228ENST00000533455 PLXDC1Q8IUK5 500 aa14.63□□□□□ -0.07
CTSB-228ENST00000533455 OR6X1Q8NH79 312 aa14.63□□□□□ -0.07
CTSB-228ENST00000533455 LYPD6BQ8NI32 183 aa14.63□□□□□ -0.07
CTSB-228ENST00000533455 SFT2D1Q8WV19 159 aa14.63□□□□□ -0.07
CTSB-228ENST00000533455 TM2D1Q9BX74 207 aa14.63□□□□□ -0.07
CTSB-228ENST00000533455 EGLN1Q9GZT9 426 aa14.63□□□□□ -0.07
CTSB-228ENST00000533455 SDHAF3Q9NRP4 125 aa14.63□□□□□ -0.07
CTSB-228ENST00000533455 C1orf123Q9NWV4 160 aa14.63□□□□□ -0.07
CTSB-228ENST00000533455 C14orf166Q9Y224 244 aaKnown RBP14.63□□□□□ -0.07
CTSB-228ENST00000533455 IFNA2P01563 188 aa14.62□□□□□ -0.07
CTSB-228ENST00000533455 CTSSP25774 331 aa14.62□□□□□ -0.07
CTSB-228ENST00000533455 KCNJ3P48549 501 aa14.62□□□□□ -0.07
CTSB-228ENST00000533455 DVL1P1P54792 670 aaPredicted RBP14.62□□□□□ -0.07
CTSB-228ENST00000533455 HNRNPKP61978 463 aaKnown RBP eCLIP14.62□□□□□ -0.07
CTSB-228ENST00000533455 HIST3H3Q16695 136 aa14.62□□□□□ -0.07
CTSB-228ENST00000533455 RTL6Q6ICC9 239 aa14.62□□□□□ -0.07
CTSB-228ENST00000533455 FAM57BQ71RH2 274 aa14.62□□□□□ -0.07
CTSB-228ENST00000533455 ZNF283Q8N7M2 679 aa14.62□□□□□ -0.07
CTSB-228ENST00000533455 ZNF501Q96CX3 271 aaPredicted RBP14.62□□□□□ -0.07
CTSB-228ENST00000533455 SMCO4Q9NRQ5 59 aa14.62□□□□□ -0.07
CTSB-228ENST00000533455 PLA2G2EQ9NZK7 142 aa14.62□□□□□ -0.07
CTSB-228ENST00000533455 GSKIPQ9P0R6 139 aa14.62□□□□□ -0.07
CTSB-228ENST00000533455 PPP4R1LQ9P1A2 415 aa14.62□□□□□ -0.07
CTSB-228ENST00000533455 TUBD1Q9UJT1 453 aa14.62□□□□□ -0.07
CTSB-228ENST00000533455 RER1O15258 196 aa14.61□□□□□ -0.07
CTSB-228ENST00000533455 RRP8O43159 456 aaKnown RBP14.61□□□□□ -0.07
CTSB-228ENST00000533455 DUX1O43812 170 aa14.61□□□□□ -0.07
CTSB-228ENST00000533455 RPL12P30050 165 aaKnown RBP14.61□□□□□ -0.07
CTSB-228ENST00000533455 THBS4P35443 961 aa14.61□□□□□ -0.07
CTSB-228ENST00000533455 RBMXP38159 391 aaKnown RBP14.61□□□□□ -0.07
CTSB-228ENST00000533455 PTGFRP43088 359 aa14.61□□□□□ -0.07
CTSB-228ENST00000533455 SPEM2Q0P670 501 aa14.61□□□□□ -0.07
CTSB-228ENST00000533455 KISS1Q15726 138 aa14.61□□□□□ -0.07
CTSB-228ENST00000533455 ZNF239Q16600 458 aaKnown RBP14.61□□□□□ -0.07
CTSB-228ENST00000533455 CHRFAM7AQ494W8 412 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms