RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 PRKXP51817 358 aa9.58□□□□□ -0.88
TRAPPC4-213ENST00000533149 LSM3P62310 102 aaKnown RBP9.58□□□□□ -0.88
TRAPPC4-213ENST00000533149 BAMBIQ13145 260 aa9.58□□□□□ -0.88
TRAPPC4-213ENST00000533149 CDK5R1Q15078 307 aa9.58□□□□□ -0.88
TRAPPC4-213ENST00000533149 CTF1Q16619 201 aa9.58□□□□□ -0.88
TRAPPC4-213ENST00000533149 RSPO1Q2MKA7 263 aaPredicted RBP9.58□□□□□ -0.88
TRAPPC4-213ENST00000533149 SLC36A2Q495M3 483 aa9.58□□□□□ -0.88
TRAPPC4-213ENST00000533149 ZNF774Q6NX45 483 aa9.58□□□□□ -0.88
TRAPPC4-213ENST00000533149 C17orf107Q6ZR85 190 aa9.58□□□□□ -0.88
TRAPPC4-213ENST00000533149 ABHD4Q8TB40 342 aa9.58□□□□□ -0.88
TRAPPC4-213ENST00000533149 RAB2BQ8WUD1 216 aa9.58□□□□□ -0.88
TRAPPC4-213ENST00000533149 C12orf43Q96C57 262 aaKnown RBP9.58□□□□□ -0.88
TRAPPC4-213ENST00000533149 DUX5Q96PT3 197 aa9.58□□□□□ -0.88
TRAPPC4-213ENST00000533149 TMED9Q9BVK6 235 aa9.58□□□□□ -0.88
TRAPPC4-213ENST00000533149 WNT5BQ9H1J7 359 aa9.58□□□□□ -0.88
TRAPPC4-213ENST00000533149 ZNF665Q9H7R5 613 aa9.58□□□□□ -0.88
TRAPPC4-213ENST00000533149 NIPAL2Q9H841 368 aa9.58□□□□□ -0.88
TRAPPC4-213ENST00000533149 ZNF275Q9NSD4 429 aaPredicted RBP9.58□□□□□ -0.88
TRAPPC4-213ENST00000533149 PLEK2Q9NYT0 353 aa9.58□□□□□ -0.88
TRAPPC4-213ENST00000533149 ZNF224Q9NZL3 707 aa9.58□□□□□ -0.88
TRAPPC4-213ENST00000533149 FRRS1LQ9P0K9 344 aa9.58□□□□□ -0.88
TRAPPC4-213ENST00000533149 STUB1Q9UNE7 303 aa9.58□□□□□ -0.88
TRAPPC4-213ENST00000533149 CMAHPQ9Y471 501 aa9.58□□□□□ -0.88
TRAPPC4-213ENST00000533149 MMP24Q9Y5R2 645 aa9.58□□□□□ -0.88
TRAPPC4-213ENST00000533149 R4GMQ9 66 aa9.58□□□□□ -0.88
TRAPPC4-213ENST00000533149 LOC100506127A0A0U1RQW1 187 aa9.57□□□□□ -0.88
TRAPPC4-213ENST00000533149 A0A1B0GUS0 222 aa9.57□□□□□ -0.88
TRAPPC4-213ENST00000533149 TMEM269A0A1B0GVZ9 245 aa9.57□□□□□ -0.88
TRAPPC4-213ENST00000533149 OR4C45A6NMZ5 311 aa9.57□□□□□ -0.88
TRAPPC4-213ENST00000533149 CLDN34H7C241 214 aa9.57□□□□□ -0.88
TRAPPC4-213ENST00000533149 ZNF701M0R085 212 aaPredicted RBP9.57□□□□□ -0.88
TRAPPC4-213ENST00000533149 SRSF10O75494 262 aaKnown RBP9.57□□□□□ -0.88
TRAPPC4-213ENST00000533149 GABARAPO95166 117 aa9.57□□□□□ -0.88
TRAPPC4-213ENST00000533149 HPXP02790 462 aa9.57□□□□□ -0.88
TRAPPC4-213ENST00000533149 MDKP21741 143 aaPredicted RBP9.57□□□□□ -0.88
TRAPPC4-213ENST00000533149 HSD11B1P28845 292 aa9.57□□□□□ -0.88
TRAPPC4-213ENST00000533149 GABRA5P31644 462 aa9.57□□□□□ -0.88
TRAPPC4-213ENST00000533149 ARR3P36575 388 aa9.57□□□□□ -0.88
TRAPPC4-213ENST00000533149 KIR3DL2P43630 455 aa9.57□□□□□ -0.88
TRAPPC4-213ENST00000533149 CCR9P51686 369 aa9.57□□□□□ -0.88
TRAPPC4-213ENST00000533149 GRB2P62993 217 aaKnown RBP9.57□□□□□ -0.88
TRAPPC4-213ENST00000533149 GALK2Q01415 458 aa9.57□□□□□ -0.88
TRAPPC4-213ENST00000533149 FABP5Q01469 135 aa9.57□□□□□ -0.88
TRAPPC4-213ENST00000533149 MFGE8Q08431 387 aaPredicted RBP9.57□□□□□ -0.88
TRAPPC4-213ENST00000533149 ECH1Q13011 328 aa9.57□□□□□ -0.88
TRAPPC4-213ENST00000533149 TUSC1Q2TAM9 212 aa9.57□□□□□ -0.88
TRAPPC4-213ENST00000533149 TIMM50Q3ZCQ8 353 aa9.57□□□□□ -0.88
TRAPPC4-213ENST00000533149 PABPC1L2AQ5JQF8 200 aa9.57□□□□□ -0.88
TRAPPC4-213ENST00000533149 WDR38Q5JTN6 314 aa9.57□□□□□ -0.88
TRAPPC4-213ENST00000533149 TMEM53Q6P2H8 277 aa9.57□□□□□ -0.88
TRAPPC4-213ENST00000533149 GDPGP1Q6ZNW5 385 aa9.57□□□□□ -0.88
TRAPPC4-213ENST00000533149 DPPA2Q7Z7J5 298 aa9.57□□□□□ -0.88
TRAPPC4-213ENST00000533149 CATSPERDQ86XM0 798 aa9.57□□□□□ -0.88
TRAPPC4-213ENST00000533149 PRSS35Q8N3Z0 413 aa9.57□□□□□ -0.88
TRAPPC4-213ENST00000533149 OR1F12Q8NHA8 337 aa9.57□□□□□ -0.88
TRAPPC4-213ENST00000533149 RPS4Y2Q8TD47 263 aa9.57□□□□□ -0.88
TRAPPC4-213ENST00000533149 SMIM19Q96E16 107 aa9.57□□□□□ -0.88
TRAPPC4-213ENST00000533149 C4orf45Q96LM5 186 aa9.57□□□□□ -0.88
TRAPPC4-213ENST00000533149 KCNJ15Q99712 375 aa9.57□□□□□ -0.88
TRAPPC4-213ENST00000533149 ATF6BQ99941 703 aa9.57□□□□□ -0.88
TRAPPC4-213ENST00000533149 PDCD1LG2Q9BQ51 273 aa9.57□□□□□ -0.88
TRAPPC4-213ENST00000533149 BCL7BQ9BQE9 202 aa9.57□□□□□ -0.88
TRAPPC4-213ENST00000533149 CHCHD6Q9BRQ6 235 aa9.57□□□□□ -0.88
TRAPPC4-213ENST00000533149 EXOSC4Q9NPD3 245 aaKnown RBP9.57□□□□□ -0.88
TRAPPC4-213ENST00000533149 BRD7Q9NPI1 651 aa9.57□□□□□ -0.88
TRAPPC4-213ENST00000533149 OR52A1Q9UKL2 312 aa9.57□□□□□ -0.88
TRAPPC4-213ENST00000533149 SSR3Q9UNL2 185 aa9.57□□□□□ -0.88
TRAPPC4-213ENST00000533149 SLC22A13Q9Y226 551 aa9.57□□□□□ -0.88
TRAPPC4-213ENST00000533149 TRDV1A0A1B0GX56 115 aa9.56□□□□□ -0.88
TRAPPC4-213ENST00000533149 ZNF503-AS2A6NEH8 195 aa9.56□□□□□ -0.88
TRAPPC4-213ENST00000533149 OR6C6A6NF89 314 aa9.56□□□□□ -0.88
TRAPPC4-213ENST00000533149 F5H5K5 113 aa9.56□□□□□ -0.88
TRAPPC4-213ENST00000533149 LOC110117498-PIK3R3F6TDL0 507 aa9.56□□□□□ -0.88
TRAPPC4-213ENST00000533149 H3BMQ9 156 aa9.56□□□□□ -0.88
TRAPPC4-213ENST00000533149 DOK2O60496 412 aa9.56□□□□□ -0.88
TRAPPC4-213ENST00000533149 ZFPL1O95159 310 aa9.56□□□□□ -0.88
TRAPPC4-213ENST00000533149 UBL3O95164 117 aa9.56□□□□□ -0.88
TRAPPC4-213ENST00000533149 KNG1P01042 644 aa9.56□□□□□ -0.88
TRAPPC4-213ENST00000533149 IGKV3-15P01624 115 aa9.56□□□□□ -0.88
TRAPPC4-213ENST00000533149 HLA-DPB1P04440 258 aa9.56□□□□□ -0.88
TRAPPC4-213ENST00000533149 MMP16P51512 607 aa9.56□□□□□ -0.88
TRAPPC4-213ENST00000533149 VBP1P61758 197 aa9.56□□□□□ -0.88
TRAPPC4-213ENST00000533149 RAB1AP62820 205 aa9.56□□□□□ -0.88
TRAPPC4-213ENST00000533149 TUBA1BP68363 451 aa9.56□□□□□ -0.88
TRAPPC4-213ENST00000533149 TRAM1Q15629 374 aa9.56□□□□□ -0.88
TRAPPC4-213ENST00000533149 CNPY1Q3B7I2 92 aa9.56□□□□□ -0.88
TRAPPC4-213ENST00000533149 ZNF829Q3KNS6 432 aaPredicted RBP9.56□□□□□ -0.88
TRAPPC4-213ENST00000533149 CD200R1LQ6Q8B3 271 aa9.56□□□□□ -0.88
TRAPPC4-213ENST00000533149 TMEM91Q6ZNR0 172 aa9.56□□□□□ -0.88
TRAPPC4-213ENST00000533149 TUBA1AQ71U36 451 aa9.56□□□□□ -0.88
TRAPPC4-213ENST00000533149 NAA40Q86UY6 237 aa9.56□□□□□ -0.88
TRAPPC4-213ENST00000533149 CCDC36Q8IYA8 594 aa9.56□□□□□ -0.88
TRAPPC4-213ENST00000533149 RDH10Q8IZV5 341 aa9.56□□□□□ -0.88
TRAPPC4-213ENST00000533149 MS4A15Q8N5U1 240 aa9.56□□□□□ -0.88
TRAPPC4-213ENST00000533149 ZNF283Q8N7M2 679 aa9.56□□□□□ -0.88
TRAPPC4-213ENST00000533149 CPEB3Q8NE35 698 aaKnown RBP9.56□□□□□ -0.88
TRAPPC4-213ENST00000533149 IL17RDQ8NFM7 739 aa9.56□□□□□ -0.88
TRAPPC4-213ENST00000533149 OR5AK2Q8NH90 309 aa9.56□□□□□ -0.88
TRAPPC4-213ENST00000533149 SLC7A6Q92536 515 aa9.56□□□□□ -0.88
TRAPPC4-213ENST00000533149 PGLYRP3Q96LB9 341 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms