RNA–Protein interactions for RNA: ENST00000533001.1

KNL1-211, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,923 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-211ENST00000533001 IGHV2-26A0A0B4J1V2 119 aa1.22□□□□□ -2.21
KNL1-211ENST00000533001 TRAPPC13A5PLN9 417 aa1.22□□□□□ -2.21
KNL1-211ENST00000533001 DUXAA6NLW8 204 aa1.22□□□□□ -2.21
KNL1-211ENST00000533001 AIM2O14862 343 aa1.22□□□□□ -2.21
KNL1-211ENST00000533001 POLR3GO15318 223 aaPredicted RBP1.22□□□□□ -2.21
KNL1-211ENST00000533001 TOX4O94842 621 aa1.22□□□□□ -2.21
KNL1-211ENST00000533001 IPO7O95373 1038 aaKnown RBP1.22□□□□□ -2.21
KNL1-211ENST00000533001 CH25HO95992 272 aa1.22□□□□□ -2.21
KNL1-211ENST00000533001 GYPAP02724 150 aa1.22□□□□□ -2.21
KNL1-211ENST00000533001 SLC2A1P11166 492 aa1.22□□□□□ -2.21
KNL1-211ENST00000533001 ZNF43P17038 809 aa1.22□□□□□ -2.21
KNL1-211ENST00000533001 TMEM11P17152 192 aa1.22□□□□□ -2.21
KNL1-211ENST00000533001 POLR2IP36954 125 aaKnown RBP1.22□□□□□ -2.21
KNL1-211ENST00000533001 MDH1P40925 334 aaKnown RBP1.22□□□□□ -2.21
KNL1-211ENST00000533001 GLIPR1P48060 266 aa1.22□□□□□ -2.21
KNL1-211ENST00000533001 NPY4RP50391 375 aa1.22□□□□□ -2.21
KNL1-211ENST00000533001 ABCE1P61221 599 aaKnown RBP1.22□□□□□ -2.21
KNL1-211ENST00000533001 TNFAIP6P98066 277 aaPredicted RBP1.22□□□□□ -2.21
KNL1-211ENST00000533001 CDK6Q00534 326 aa1.22□□□□□ -2.21
KNL1-211ENST00000533001 HIST2H2ACQ16777 129 aaPredicted RBP1.22□□□□□ -2.21
KNL1-211ENST00000533001 HFEQ30201 348 aa1.22□□□□□ -2.21
KNL1-211ENST00000533001 ANKDD1AQ495B1 522 aa1.22□□□□□ -2.21
KNL1-211ENST00000533001 CT45A1Q5HYN5 189 aa1.22□□□□□ -2.21
KNL1-211ENST00000533001 HIST2H2AA3Q6FI13 130 aa1.22□□□□□ -2.21
KNL1-211ENST00000533001 LCN8Q6JVE9 175 aa1.22□□□□□ -2.21
KNL1-211ENST00000533001 REEP3Q6NUK4 255 aa1.22□□□□□ -2.21
KNL1-211ENST00000533001 TRMT10CQ7L0Y3 403 aaKnown RBP1.22□□□□□ -2.21
KNL1-211ENST00000533001 LINC00311Q8N616 119 aa1.22□□□□□ -2.21
KNL1-211ENST00000533001 GVQW1Q8N7I0 195 aa1.22□□□□□ -2.21
KNL1-211ENST00000533001 TPRX1Q8N7U7 411 aa1.22□□□□□ -2.21
KNL1-211ENST00000533001 SCCPDHQ8NBX0 429 aa1.22□□□□□ -2.21
KNL1-211ENST00000533001 BBS1Q8NFJ9 593 aa1.22□□□□□ -2.21
KNL1-211ENST00000533001 OR2Z1Q8NG97 314 aa1.22□□□□□ -2.21
KNL1-211ENST00000533001 CT45A3Q8NHU0 189 aa1.22□□□□□ -2.21
KNL1-211ENST00000533001 TMEM190Q8WZ59 177 aa1.22□□□□□ -2.21
KNL1-211ENST00000533001 MPP4Q96JB8 637 aa1.22□□□□□ -2.21
KNL1-211ENST00000533001 DIRC2Q96SL1 478 aa1.22□□□□□ -2.21
KNL1-211ENST00000533001 FMO2Q99518 471 aa1.22□□□□□ -2.21
KNL1-211ENST00000533001 ASCL2Q99929 193 aa1.22□□□□□ -2.21
KNL1-211ENST00000533001 NIPSNAP1Q9BPW8 284 aa1.22□□□□□ -2.21
KNL1-211ENST00000533001 OSBPL10Q9BXB5 764 aa1.22□□□□□ -2.21
KNL1-211ENST00000533001 GPR160Q9UJ42 338 aa1.22□□□□□ -2.21
KNL1-211ENST00000533001 LINC00527Q9UJ94 153 aa1.22□□□□□ -2.21
KNL1-211ENST00000533001 SLC13A4Q9UKG4 626 aa1.22□□□□□ -2.21
KNL1-211ENST00000533001 SLC7A7Q9UM01 511 aa1.22□□□□□ -2.21
KNL1-211ENST00000533001 EDARQ9UNE0 448 aa1.22□□□□□ -2.21
KNL1-211ENST00000533001 HMCN1Q96RW7 5635 aa1.22□□□□□ -2.21
KNL1-211ENST00000533001 TMEM213A2RRL7 107 aa1.22□□□□□ -2.21
KNL1-211ENST00000533001 KRTAP29-1A8MX34 341 aaPredicted RBP1.22□□□□□ -2.21
KNL1-211ENST00000533001 AKR7A2O43488 359 aa1.22□□□□□ -2.21
KNL1-211ENST00000533001 AHCYL1O43865 530 aa1.22□□□□□ -2.21
KNL1-211ENST00000533001 TK1P04183 234 aa1.22□□□□□ -2.21
KNL1-211ENST00000533001 GABRA5P31644 462 aa1.22□□□□□ -2.21
KNL1-211ENST00000533001 PYCR1P32322 319 aa1.22□□□□□ -2.21
KNL1-211ENST00000533001 RPL3P39023 403 aaKnown RBP1.22□□□□□ -2.21
KNL1-211ENST00000533001 RGS6P49758 472 aa1.22□□□□□ -2.21
KNL1-211ENST00000533001 MTPNP58546 118 aa1.22□□□□□ -2.21
KNL1-211ENST00000533001 IL5RAQ01344 420 aa1.22□□□□□ -2.21
KNL1-211ENST00000533001 ZNF91Q05481 1191 aa1.22□□□□□ -2.21
KNL1-211ENST00000533001 TOMM20Q15388 145 aa1.22□□□□□ -2.21
KNL1-211ENST00000533001 ERCC6LQ2NKX8 1250 aa1.22□□□□□ -2.21
KNL1-211ENST00000533001 ZNF880Q6PDB4 577 aa1.22□□□□□ -2.21
KNL1-211ENST00000533001 P4HA3Q7Z4N8 544 aa1.22□□□□□ -2.21
KNL1-211ENST00000533001 CYP4Z1Q86W10 505 aa1.22□□□□□ -2.21
KNL1-211ENST00000533001 RAB39BQ96DA2 213 aa1.22□□□□□ -2.21
KNL1-211ENST00000533001 CGREF1Q99674 301 aa1.22□□□□□ -2.21
KNL1-211ENST00000533001 ABHD6Q9BV23 337 aa1.22□□□□□ -2.21
KNL1-211ENST00000533001 KRTAP4-4Q9BYR3 166 aa1.22□□□□□ -2.21
KNL1-211ENST00000533001 IFT22Q9H7X7 185 aa1.22□□□□□ -2.21
KNL1-211ENST00000533001 NGBQ9NPG2 151 aa1.22□□□□□ -2.21
KNL1-211ENST00000533001 SAR1AQ9NR31 198 aa1.22□□□□□ -2.21
KNL1-211ENST00000533001 SH3BP4Q9P0V3 963 aa1.22□□□□□ -2.21
KNL1-211ENST00000533001 CLN8Q9UBY8 286 aa1.22□□□□□ -2.21
KNL1-211ENST00000533001 A0A1W2PP11 408 aa1.21□□□□□ -2.22
KNL1-211ENST00000533001 CIB4A0PJX0 185 aa1.21□□□□□ -2.22
KNL1-211ENST00000533001 OR2AT4A6NND4 320 aa1.21□□□□□ -2.22
KNL1-211ENST00000533001 TIMM23O14925 209 aa1.21□□□□□ -2.22
KNL1-211ENST00000533001 GMDSO60547 372 aa1.21□□□□□ -2.22
KNL1-211ENST00000533001 CSF1P09603 554 aa1.21□□□□□ -2.22
KNL1-211ENST00000533001 ATP6V1C1P21283 382 aa1.21□□□□□ -2.22
KNL1-211ENST00000533001 CA6P23280 308 aa1.21□□□□□ -2.22
KNL1-211ENST00000533001 CDK5Q00535 292 aa1.21□□□□□ -2.22
KNL1-211ENST00000533001 DYRK1AQ13627 763 aa1.21□□□□□ -2.22
KNL1-211ENST00000533001 CNN3Q15417 329 aaKnown RBP1.21□□□□□ -2.22
KNL1-211ENST00000533001 SPA17Q15506 151 aa1.21□□□□□ -2.22
KNL1-211ENST00000533001 NCR3LG1Q68D85 454 aa1.21□□□□□ -2.22
KNL1-211ENST00000533001 FDX2Q6P4F2 183 aa1.21□□□□□ -2.22
KNL1-211ENST00000533001 BHLHE23Q8NDY6 225 aa1.21□□□□□ -2.22
KNL1-211ENST00000533001 OR56B2PQ8NGI1 322 aa1.21□□□□□ -2.22
KNL1-211ENST00000533001 VANGL1Q8TAA9 524 aaPredicted RBP1.21□□□□□ -2.22
KNL1-211ENST00000533001 ZNF566Q969W8 418 aa1.21□□□□□ -2.22
KNL1-211ENST00000533001 BPIFA2Q96DR5 249 aa1.21□□□□□ -2.22
KNL1-211ENST00000533001 OR14A2Q96R54 314 aa1.21□□□□□ -2.22
KNL1-211ENST00000533001 NMNAT3Q96T66 252 aa1.21□□□□□ -2.22
KNL1-211ENST00000533001 GPHA2Q96T91 129 aa1.21□□□□□ -2.22
KNL1-211ENST00000533001 PITX2Q99697 317 aa1.21□□□□□ -2.22
KNL1-211ENST00000533001 PPA2Q9H2U2 334 aa1.21□□□□□ -2.22
KNL1-211ENST00000533001 LIN7BQ9HAP6 207 aa1.21□□□□□ -2.22
KNL1-211ENST00000533001 ST6GALNAC1Q9NSC7 600 aaPredicted RBP1.21□□□□□ -2.22
KNL1-211ENST00000533001 INTS9Q9NV88 658 aaKnown RBP1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms