RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 TMEM100Q9NV29 134 aa13.65□□□□□ -0.22
PCDHA3-202ENST00000532566 OCIAD1Q9NX40 245 aa13.65□□□□□ -0.22
PCDHA3-202ENST00000532566 SERPINA7P05543 415 aa13.64□□□□□ -0.23
PCDHA3-202ENST00000532566 RPL12P30050 165 aaKnown RBP13.64□□□□□ -0.23
PCDHA3-202ENST00000532566 CD96P40200 585 aa13.64□□□□□ -0.23
PCDHA3-202ENST00000532566 DHRS2Q13268 280 aa13.64□□□□□ -0.23
PCDHA3-202ENST00000532566 OR1C1Q15619 314 aa13.64□□□□□ -0.23
PCDHA3-202ENST00000532566 SPICQ8N5J4 248 aa13.64□□□□□ -0.23
PCDHA3-202ENST00000532566 PPP1R3EQ9H7J1 279 aa13.64□□□□□ -0.23
PCDHA3-202ENST00000532566 PLEKHA2Q9HB19 425 aa13.64□□□□□ -0.23
PCDHA3-202ENST00000532566 FSCN3Q9NQT6 498 aa13.64□□□□□ -0.23
PCDHA3-202ENST00000532566 SLC22A20A6NK97 555 aa13.64□□□□□ -0.23
PCDHA3-202ENST00000532566 CRYBA2P53672 197 aa13.64□□□□□ -0.23
PCDHA3-202ENST00000532566 H3F3CQ6NXT2 135 aa13.64□□□□□ -0.23
PCDHA3-202ENST00000532566 OR10AC1Q8NH08 325 aa13.64□□□□□ -0.23
PCDHA3-202ENST00000532566 NTMQ9P121 344 aa13.64□□□□□ -0.23
PCDHA3-202ENST00000532566 UBE2KP61086 200 aa13.64□□□□□ -0.23
PCDHA3-202ENST00000532566 TMEM268Q5VZI3 342 aa13.64□□□□□ -0.23
PCDHA3-202ENST00000532566 RIMS4Q9H426 269 aaPredicted RBP13.64□□□□□ -0.23
PCDHA3-202ENST00000532566 PLK3Q9H4B4 646 aa13.64□□□□□ -0.23
PCDHA3-202ENST00000532566 PRELID3BQ9Y3B1 194 aa13.64□□□□□ -0.23
PCDHA3-202ENST00000532566 LRP3O75074 770 aa13.64□□□□□ -0.23
PCDHA3-202ENST00000532566 ZNF32P17041 273 aa13.64□□□□□ -0.23
PCDHA3-202ENST00000532566 SSPNQ14714 243 aa13.64□□□□□ -0.23
PCDHA3-202ENST00000532566 C1orf210Q8IVY1 113 aa13.64□□□□□ -0.23
PCDHA3-202ENST00000532566 OR1S2Q8NGQ3 325 aa13.64□□□□□ -0.23
PCDHA3-202ENST00000532566 SCN2AQ99250 2005 aa13.63□□□□□ -0.23
PCDHA3-202ENST00000532566 TRAV8-7A0A075B6U6 113 aa13.63□□□□□ -0.23
PCDHA3-202ENST00000532566 PMS2P1A4D2B8 440 aa13.63□□□□□ -0.23
PCDHA3-202ENST00000532566 GP1BAP07359 652 aa13.63□□□□□ -0.23
PCDHA3-202ENST00000532566 EIF2S3P41091 472 aaKnown RBP13.63□□□□□ -0.23
PCDHA3-202ENST00000532566 GGTLC2Q14390 218 aa13.63□□□□□ -0.23
PCDHA3-202ENST00000532566 SLC30A7Q8NEW0 376 aa13.63□□□□□ -0.23
PCDHA3-202ENST00000532566 ZPLD1Q8TCW7 415 aa13.63□□□□□ -0.23
PCDHA3-202ENST00000532566 TMEM68Q96MH6 324 aa13.63□□□□□ -0.23
PCDHA3-202ENST00000532566 GCM1Q9NP62 436 aa13.63□□□□□ -0.23
PCDHA3-202ENST00000532566 UFSP2Q9NUQ7 469 aa13.63□□□□□ -0.23
PCDHA3-202ENST00000532566 QPCTLQ9NXS2 382 aa13.63□□□□□ -0.23
PCDHA3-202ENST00000532566 E5RGE8 158 aa13.63□□□□□ -0.23
PCDHA3-202ENST00000532566 SH2D1BO14796 132 aa13.63□□□□□ -0.23
PCDHA3-202ENST00000532566 WDR1O75083 606 aa13.63□□□□□ -0.23
PCDHA3-202ENST00000532566 TPPPO94811 219 aa13.63□□□□□ -0.23
PCDHA3-202ENST00000532566 NXPH3O95157 252 aa13.63□□□□□ -0.23
PCDHA3-202ENST00000532566 FUT3P21217 361 aa13.63□□□□□ -0.23
PCDHA3-202ENST00000532566 F2RL1P55085 397 aa13.63□□□□□ -0.23
PCDHA3-202ENST00000532566 ZNF626Q68DY1 528 aa13.63□□□□□ -0.23
PCDHA3-202ENST00000532566 C11orf87Q6NUJ2 197 aa13.63□□□□□ -0.23
PCDHA3-202ENST00000532566 TSEN54Q7Z6J9 526 aaKnown RBP13.63□□□□□ -0.23
PCDHA3-202ENST00000532566 TRIB1Q96RU8 372 aa13.63□□□□□ -0.23
PCDHA3-202ENST00000532566 CHST6Q9GZX3 395 aa13.63□□□□□ -0.23
PCDHA3-202ENST00000532566 KCNE5Q9UJ90 142 aa13.63□□□□□ -0.23
PCDHA3-202ENST00000532566 NSG2Q9Y328 171 aa13.63□□□□□ -0.23
PCDHA3-202ENST00000532566 IGHV3-64DA0A0J9YX35 117 aa13.63□□□□□ -0.23
PCDHA3-202ENST00000532566 NUDT19A8MXV4 375 aa13.63□□□□□ -0.23
PCDHA3-202ENST00000532566 CLLU1Q5K131 121 aa13.63□□□□□ -0.23
PCDHA3-202ENST00000532566 OR10D3Q8NH80 312 aa13.63□□□□□ -0.23
PCDHA3-202ENST00000532566 ZNF501Q96CX3 271 aaPredicted RBP13.63□□□□□ -0.23
PCDHA3-202ENST00000532566 SLC39A9Q9NUM3 307 aa13.63□□□□□ -0.23
PCDHA3-202ENST00000532566 ZNF732B4DXR9 585 aa13.63□□□□□ -0.23
PCDHA3-202ENST00000532566 BCL2L11O43521 198 aa13.63□□□□□ -0.23
PCDHA3-202ENST00000532566 EFEMP2O95967 443 aa13.63□□□□□ -0.23
PCDHA3-202ENST00000532566 HPNP05981 417 aa13.63□□□□□ -0.23
PCDHA3-202ENST00000532566 FAM157BP0CG42 384 aa13.63□□□□□ -0.23
PCDHA3-202ENST00000532566 FPR2P25090 351 aa13.63□□□□□ -0.23
PCDHA3-202ENST00000532566 RAC3P60763 192 aa13.63□□□□□ -0.23
PCDHA3-202ENST00000532566 RAB1AP62820 205 aa13.63□□□□□ -0.23
PCDHA3-202ENST00000532566 AKR1C1Q04828 323 aa13.63□□□□□ -0.23
PCDHA3-202ENST00000532566 PLGLAQ15195 96 aa13.63□□□□□ -0.23
PCDHA3-202ENST00000532566 ZNF774Q6NX45 483 aa13.63□□□□□ -0.23
PCDHA3-202ENST00000532566 DHRS13Q6UX07 377 aa13.63□□□□□ -0.23
PCDHA3-202ENST00000532566 OPA3Q9H6K4 179 aa13.63□□□□□ -0.23
PCDHA3-202ENST00000532566 ZNF629Q9UEG4 869 aaPredicted RBP13.63□□□□□ -0.23
PCDHA3-202ENST00000532566 IFNA10P01566 189 aa13.62□□□□□ -0.23
PCDHA3-202ENST00000532566 CCL4P13236 92 aa13.62□□□□□ -0.23
PCDHA3-202ENST00000532566 SNCAP37840 140 aa13.62□□□□□ -0.23
PCDHA3-202ENST00000532566 NKX6-1P78426 367 aaPredicted RBP13.62□□□□□ -0.23
PCDHA3-202ENST00000532566 ARF1P84077 181 aaKnown RBP13.62□□□□□ -0.23
PCDHA3-202ENST00000532566 CEBPEQ15744 281 aa13.62□□□□□ -0.23
PCDHA3-202ENST00000532566 LFNGQ8NES3 379 aa13.62□□□□□ -0.23
PCDHA3-202ENST00000532566 OR2G3Q8NGZ4 309 aa13.62□□□□□ -0.23
PCDHA3-202ENST00000532566 OR2AE1Q8NHA4 323 aa13.62□□□□□ -0.23
PCDHA3-202ENST00000532566 CTHRC1Q96CG8 243 aa13.62□□□□□ -0.23
PCDHA3-202ENST00000532566 UBL7Q96S82 380 aaPredicted RBP13.62□□□□□ -0.23
PCDHA3-202ENST00000532566 PLA2G3Q9NZ20 509 aa13.62□□□□□ -0.23
PCDHA3-202ENST00000532566 ARPC4-TTLL3A0A0A6YYG9 625 aa13.62□□□□□ -0.23
PCDHA3-202ENST00000532566 IGHV5-10-1A0A0J9YXX1 117 aa13.62□□□□□ -0.23
PCDHA3-202ENST00000532566 OR5H15A6NDH6 313 aa13.62□□□□□ -0.23
PCDHA3-202ENST00000532566 SIRPB1O00241 398 aa13.62□□□□□ -0.23
PCDHA3-202ENST00000532566 GAB4Q2WGN9 574 aa13.62□□□□□ -0.23
PCDHA3-202ENST00000532566 FAM74A1Q5RGS3 127 aa13.62□□□□□ -0.23
PCDHA3-202ENST00000532566 RBMS3Q6XE24 437 aaKnown RBP13.62□□□□□ -0.23
PCDHA3-202ENST00000532566 CATSPERDQ86XM0 798 aa13.62□□□□□ -0.23
PCDHA3-202ENST00000532566 WDSUB1Q8N9V3 476 aa13.62□□□□□ -0.23
PCDHA3-202ENST00000532566 PARP12Q9H0J9 701 aaKnown RBP13.62□□□□□ -0.23
PCDHA3-202ENST00000532566 MPPED1O15442 326 aa13.62□□□□□ -0.23
PCDHA3-202ENST00000532566 MT-CO3P00414 261 aa13.62□□□□□ -0.23
PCDHA3-202ENST00000532566 ASAH2BP0C7U1 165 aa13.62□□□□□ -0.23
PCDHA3-202ENST00000532566 CD200R1LQ6Q8B3 271 aa13.62□□□□□ -0.23
PCDHA3-202ENST00000532566 OR8B12Q8NGG6 310 aa13.62□□□□□ -0.23
PCDHA3-202ENST00000532566 OR4A16Q8NH70 328 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms