RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 F5H5P2 479 aa12.23□□□□□ -0.45
CPSF1-206ENST00000531480 P2RY10O00398 339 aa12.23□□□□□ -0.45
CPSF1-206ENST00000531480 OGG1O15527 345 aa12.23□□□□□ -0.45
CPSF1-206ENST00000531480 LALBAP00709 142 aa12.23□□□□□ -0.45
CPSF1-206ENST00000531480 SLC25A16P16260 332 aa12.23□□□□□ -0.45
CPSF1-206ENST00000531480 SRP9P49458 86 aaKnown RBP12.23□□□□□ -0.45
CPSF1-206ENST00000531480 GBX2P52951 348 aaPredicted RBP12.23□□□□□ -0.45
CPSF1-206ENST00000531480 EMX1Q04741 257 aaPredicted RBP12.23□□□□□ -0.45
CPSF1-206ENST00000531480 ACSM1Q08AH1 577 aa12.23□□□□□ -0.45
CPSF1-206ENST00000531480 RIPPLY1Q0D2K3 151 aa12.23□□□□□ -0.45
CPSF1-206ENST00000531480 OR8G1Q15617 311 aa12.23□□□□□ -0.45
CPSF1-206ENST00000531480 NEDD8Q15843 81 aa12.23□□□□□ -0.45
CPSF1-206ENST00000531480 TMEM244Q5VVB8 128 aa12.23□□□□□ -0.45
CPSF1-206ENST00000531480 XAF1Q6GPH4 301 aa12.23□□□□□ -0.45
CPSF1-206ENST00000531480 RPL22L1Q6P5R6 122 aaKnown RBP12.23□□□□□ -0.45
CPSF1-206ENST00000531480 Q8TCH9 128 aa12.23□□□□□ -0.45
CPSF1-206ENST00000531480 ITLN1Q8WWA0 313 aa12.23□□□□□ -0.45
CPSF1-206ENST00000531480 SGCDQ92629 289 aa12.23□□□□□ -0.45
CPSF1-206ENST00000531480 FAM71F1Q96KD3 344 aaPredicted RBP12.23□□□□□ -0.45
CPSF1-206ENST00000531480 ADAT1Q9BUB4 502 aaKnown RBP12.23□□□□□ -0.45
CPSF1-206ENST00000531480 GCM1Q9NP62 436 aa12.23□□□□□ -0.45
CPSF1-206ENST00000531480 ACOT13Q9NPJ3 140 aa12.23□□□□□ -0.45
CPSF1-206ENST00000531480 ZNF275Q9NSD4 429 aaPredicted RBP12.23□□□□□ -0.45
CPSF1-206ENST00000531480 GTF2A1LQ9UNN4 478 aa12.23□□□□□ -0.45
CPSF1-206ENST00000531480 LSM2Q9Y333 95 aaKnown RBP12.23□□□□□ -0.45
CPSF1-206ENST00000531480 ACANP16112 2415 aa12.22□□□□□ -0.45
CPSF1-206ENST00000531480 LOC107986453A0A1B0GWG9 222 aa12.22□□□□□ -0.45
CPSF1-206ENST00000531480 TMEM212A6NML5 194 aa12.22□□□□□ -0.45
CPSF1-206ENST00000531480 LYNX1G3V0Z9 82 aa12.22□□□□□ -0.45
CPSF1-206ENST00000531480 IFNL4K9M1U5 179 aa12.22□□□□□ -0.45
CPSF1-206ENST00000531480 ZFPL1O95159 310 aa12.22□□□□□ -0.45
CPSF1-206ENST00000531480 FSTL3O95633 263 aa12.22□□□□□ -0.45
CPSF1-206ENST00000531480 LYNX1P0DP58 116 aa12.22□□□□□ -0.45
CPSF1-206ENST00000531480 ZNF12P17014 697 aa12.22□□□□□ -0.45
CPSF1-206ENST00000531480 CDH15P55291 814 aa12.22□□□□□ -0.45
CPSF1-206ENST00000531480 BDH1Q02338 343 aa12.22□□□□□ -0.45
CPSF1-206ENST00000531480 DOC2BQ14184 412 aa12.22□□□□□ -0.45
CPSF1-206ENST00000531480 CDK5R1Q15078 307 aa12.22□□□□□ -0.45
CPSF1-206ENST00000531480 SPHARQ15513 63 aa12.22□□□□□ -0.45
CPSF1-206ENST00000531480 MED22Q15528 200 aa12.22□□□□□ -0.45
CPSF1-206ENST00000531480 SYT6Q5T7P8 510 aaPredicted RBP12.22□□□□□ -0.45
CPSF1-206ENST00000531480 UBE2UQ5VVX9 321 aa12.22□□□□□ -0.45
CPSF1-206ENST00000531480 ZNF420Q8TAQ5 688 aaPredicted RBP12.22□□□□□ -0.45
CPSF1-206ENST00000531480 HPSE2Q8WWQ2 592 aa12.22□□□□□ -0.45
CPSF1-206ENST00000531480 OR5P3Q8WZ94 311 aa12.22□□□□□ -0.45
CPSF1-206ENST00000531480 DGCR14Q96DF8 476 aaKnown RBP12.22□□□□□ -0.45
CPSF1-206ENST00000531480 BCL7BQ9BQE9 202 aa12.22□□□□□ -0.45
CPSF1-206ENST00000531480 FGF23Q9GZV9 251 aaPredicted RBP12.22□□□□□ -0.45
CPSF1-206ENST00000531480 TLNRD1Q9H1K6 362 aa12.22□□□□□ -0.45
CPSF1-206ENST00000531480 PPP1R3EQ9H7J1 279 aa12.22□□□□□ -0.45
CPSF1-206ENST00000531480 ENPP5Q9UJA9 477 aa12.22□□□□□ -0.45
CPSF1-206ENST00000531480 PIGLQ9Y2B2 252 aa12.22□□□□□ -0.45
CPSF1-206ENST00000531480 CACNG2Q9Y698 323 aa12.22□□□□□ -0.45
CPSF1-206ENST00000531480 SIRT4Q9Y6E7 314 aaPredicted RBP12.22□□□□□ -0.45
CPSF1-206ENST00000531480 A0A1B0GVI7 797 aa12.21□□□□□ -0.45
CPSF1-206ENST00000531480 CCDC160A6NGH7 325 aa12.21□□□□□ -0.45
CPSF1-206ENST00000531480 TRIM64BA6NI03 449 aa12.21□□□□□ -0.45
CPSF1-206ENST00000531480 ZNF701M0R085 212 aaPredicted RBP12.21□□□□□ -0.45
CPSF1-206ENST00000531480 SYT7O43581 403 aa12.21□□□□□ -0.45
CPSF1-206ENST00000531480 MT-ND2P03891 347 aa12.21□□□□□ -0.45
CPSF1-206ENST00000531480 TFAP2AP05549 437 aa12.21□□□□□ -0.45
CPSF1-206ENST00000531480 CD1AP06126 327 aa12.21□□□□□ -0.45
CPSF1-206ENST00000531480 SMIM18P0DKX4 95 aa12.21□□□□□ -0.45
CPSF1-206ENST00000531480 FAHP16930 419 aa12.21□□□□□ -0.45
CPSF1-206ENST00000531480 PSMB9P28065 219 aa12.21□□□□□ -0.45
CPSF1-206ENST00000531480 NR4A2P43354 598 aa12.21□□□□□ -0.45
CPSF1-206ENST00000531480 ALDH3B2P48448 385 aa12.21□□□□□ -0.45
CPSF1-206ENST00000531480 GTF2A1P52655 376 aaPredicted RBP12.21□□□□□ -0.45
CPSF1-206ENST00000531480 WNT4P56705 351 aa12.21□□□□□ -0.45
CPSF1-206ENST00000531480 MZT1Q08AG7 82 aa12.21□□□□□ -0.45
CPSF1-206ENST00000531480 PRDX4Q13162 271 aa12.21□□□□□ -0.45
CPSF1-206ENST00000531480 GPR50Q13585 617 aa12.21□□□□□ -0.45
CPSF1-206ENST00000531480 TRAM1Q15629 374 aa12.21□□□□□ -0.45
CPSF1-206ENST00000531480 HFEQ30201 348 aa12.21□□□□□ -0.45
CPSF1-206ENST00000531480 CEACAM21Q3KPI0 293 aa12.21□□□□□ -0.45
CPSF1-206ENST00000531480 DMKNQ6E0U4 476 aaPredicted RBP12.21□□□□□ -0.45
CPSF1-206ENST00000531480 WDR86Q86TI4 376 aa12.21□□□□□ -0.45
CPSF1-206ENST00000531480 COMMD2Q86X83 199 aa12.21□□□□□ -0.45
CPSF1-206ENST00000531480 RDH10Q8IZV5 341 aa12.21□□□□□ -0.45
CPSF1-206ENST00000531480 SMIM19Q96E16 107 aa12.21□□□□□ -0.45
CPSF1-206ENST00000531480 COX4I2Q96KJ9 171 aa12.21□□□□□ -0.45
CPSF1-206ENST00000531480 PIMREGQ9BSJ6 248 aa12.21□□□□□ -0.45
CPSF1-206ENST00000531480 PAPOLGQ9BWT3 736 aaKnown RBP12.21□□□□□ -0.45
CPSF1-206ENST00000531480 TRIM36Q9NQ86 728 aa12.21□□□□□ -0.45
CPSF1-206ENST00000531480 HHLA2Q9UM44 414 aa12.21□□□□□ -0.45
CPSF1-206ENST00000531480 PPP1R3CQ9UQK1 317 aa12.21□□□□□ -0.45
CPSF1-206ENST00000531480 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.2□□□□□ -0.46
CPSF1-206ENST00000531480 ZNF850A8MQ14 1090 aa12.2□□□□□ -0.46
CPSF1-206ENST00000531480 TPD52L2O43399 206 aaKnown RBP12.2□□□□□ -0.46
CPSF1-206ENST00000531480 FOSL1P15407 271 aa12.2□□□□□ -0.46
CPSF1-206ENST00000531480 CFHR2P36980 270 aa12.2□□□□□ -0.46
CPSF1-206ENST00000531480 GNALP38405 381 aa12.2□□□□□ -0.46
CPSF1-206ENST00000531480 PMELP40967 661 aa12.2□□□□□ -0.46
CPSF1-206ENST00000531480 LOXL1Q08397 574 aaPredicted RBP12.2□□□□□ -0.46
CPSF1-206ENST00000531480 ODF4Q2M2E3 257 aa12.2□□□□□ -0.46
CPSF1-206ENST00000531480 CLVS2Q5SYC1 327 aa12.2□□□□□ -0.46
CPSF1-206ENST00000531480 C11orf53Q8IXP5 236 aa12.2□□□□□ -0.46
CPSF1-206ENST00000531480 ZDHHC23Q8IYP9 409 aa12.2□□□□□ -0.46
CPSF1-206ENST00000531480 OR10AC1Q8NH08 325 aa12.2□□□□□ -0.46
CPSF1-206ENST00000531480 OR5AK2Q8NH90 309 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms