RNA–Protein interactions for RNA: ENST00000529476.1

USF1-209, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-209ENST00000529476 CHN2P52757 468 aa11.86□□□□□ -0.51
USF1-209ENST00000529476 ACSM1Q08AH1 577 aa11.86□□□□□ -0.51
USF1-209ENST00000529476 MAB21L1Q13394 359 aa11.86□□□□□ -0.51
USF1-209ENST00000529476 TBCEQ15813 527 aaPredicted RBP11.86□□□□□ -0.51
USF1-209ENST00000529476 CARTPTQ16568 116 aa11.86□□□□□ -0.51
USF1-209ENST00000529476 KCTD21Q4G0X4 260 aa11.86□□□□□ -0.51
USF1-209ENST00000529476 DMRTC1Q5HYR2 192 aa11.86□□□□□ -0.51
USF1-209ENST00000529476 KRT74Q7RTS7 529 aa11.86□□□□□ -0.51
USF1-209ENST00000529476 SPARTQ8N0X7 666 aa11.86□□□□□ -0.51
USF1-209ENST00000529476 CCDC54Q8NEL0 328 aa11.86□□□□□ -0.51
USF1-209ENST00000529476 OR13C3Q8NGS6 347 aa11.86□□□□□ -0.51
USF1-209ENST00000529476 OR8S1Q8NH09 359 aa11.86□□□□□ -0.51
USF1-209ENST00000529476 RDH5Q92781 318 aa11.86□□□□□ -0.51
USF1-209ENST00000529476 GHSRQ92847 366 aa11.86□□□□□ -0.51
USF1-209ENST00000529476 YIPF5Q969M3 257 aa11.86□□□□□ -0.51
USF1-209ENST00000529476 ITPKCQ96DU7 683 aa11.86□□□□□ -0.51
USF1-209ENST00000529476 PGLYRP3Q96LB9 341 aa11.86□□□□□ -0.51
USF1-209ENST00000529476 MDFIQ99750 246 aa11.86□□□□□ -0.51
USF1-209ENST00000529476 FGF23Q9GZV9 251 aaPredicted RBP11.86□□□□□ -0.51
USF1-209ENST00000529476 PLEKHA1Q9HB21 404 aa11.86□□□□□ -0.51
USF1-209ENST00000529476 TREM2Q9NZC2 230 aa11.86□□□□□ -0.51
USF1-209ENST00000529476 NOP16Q9Y3C1 178 aaKnown RBP11.86□□□□□ -0.51
USF1-209ENST00000529476 MPC1Q9Y5U8 109 aa11.86□□□□□ -0.51
USF1-209ENST00000529476 CACNG2Q9Y698 323 aa11.86□□□□□ -0.51
USF1-209ENST00000529476 IGHV1-69-2A0A0G2JMI3 117 aa11.85□□□□□ -0.51
USF1-209ENST00000529476 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.85□□□□□ -0.51
USF1-209ENST00000529476 LOC100289279A0A1B0GTE1 492 aa11.85□□□□□ -0.51
USF1-209ENST00000529476 TRIM64A6NGJ6 449 aa11.85□□□□□ -0.51
USF1-209ENST00000529476 MRPS14O60783 128 aaKnown RBP11.85□□□□□ -0.51
USF1-209ENST00000529476 NRASP01111 189 aa11.85□□□□□ -0.51
USF1-209ENST00000529476 ZNF12P17014 697 aa11.85□□□□□ -0.51
USF1-209ENST00000529476 CELP19835 753 aa11.85□□□□□ -0.51
USF1-209ENST00000529476 CD200P41217 278 aa11.85□□□□□ -0.51
USF1-209ENST00000529476 CRYBB2P43320 205 aa11.85□□□□□ -0.51
USF1-209ENST00000529476 SRP9P49458 86 aaKnown RBP11.85□□□□□ -0.51
USF1-209ENST00000529476 BDH1Q02338 343 aa11.85□□□□□ -0.51
USF1-209ENST00000529476 EMX1Q04741 257 aaPredicted RBP11.85□□□□□ -0.51
USF1-209ENST00000529476 CLEC12BQ2HXU8 276 aa11.85□□□□□ -0.51
USF1-209ENST00000529476 CEP78Q5JTW2 689 aa11.85□□□□□ -0.51
USF1-209ENST00000529476 CLVS2Q5SYC1 327 aa11.85□□□□□ -0.51
USF1-209ENST00000529476 PRAMEF6Q5VXH4 476 aa11.85□□□□□ -0.51
USF1-209ENST00000529476 SHEQ5VZ18 495 aa11.85□□□□□ -0.51
USF1-209ENST00000529476 TMEM42Q69YG0 159 aa11.85□□□□□ -0.51
USF1-209ENST00000529476 ZNF773Q6PK81 442 aa11.85□□□□□ -0.51
USF1-209ENST00000529476 PRSS57Q6UWY2 283 aa11.85□□□□□ -0.51
USF1-209ENST00000529476 DNM1P46Q6ZS02 220 aa11.85□□□□□ -0.51
USF1-209ENST00000529476 MOB3CQ70IA8 216 aa11.85□□□□□ -0.51
USF1-209ENST00000529476 ZDHHC23Q8IYP9 409 aa11.85□□□□□ -0.51
USF1-209ENST00000529476 SPERTQ8NA61 448 aa11.85□□□□□ -0.51
USF1-209ENST00000529476 WFDC11Q8NEX6 87 aa11.85□□□□□ -0.51
USF1-209ENST00000529476 OR13C5Q8NGS8 318 aa11.85□□□□□ -0.51
USF1-209ENST00000529476 HPSE2Q8WWQ2 592 aa11.85□□□□□ -0.51
USF1-209ENST00000529476 OR5P3Q8WZ94 311 aa11.85□□□□□ -0.51
USF1-209ENST00000529476 FGGYQ96C11 551 aa11.85□□□□□ -0.51
USF1-209ENST00000529476 ADAT3Q96EY9 351 aaPredicted RBP11.85□□□□□ -0.51
USF1-209ENST00000529476 ACOT13Q9NPJ3 140 aa11.85□□□□□ -0.51
USF1-209ENST00000529476 GPR173Q9NS66 373 aa11.85□□□□□ -0.51
USF1-209ENST00000529476 ZNF275Q9NSD4 429 aaPredicted RBP11.85□□□□□ -0.51
USF1-209ENST00000529476 ANKRD61A6NGH8 418 aa11.84□□□□□ -0.51
USF1-209ENST00000529476 ANXA2P2A6NMY6 339 aa11.84□□□□□ -0.51
USF1-209ENST00000529476 PLPP2O43688 288 aa11.84□□□□□ -0.51
USF1-209ENST00000529476 RP2O75695 350 aa11.84□□□□□ -0.51
USF1-209ENST00000529476 GRPP07492 148 aa11.84□□□□□ -0.51
USF1-209ENST00000529476 RPSAP08865 295 aaKnown RBP11.84□□□□□ -0.51
USF1-209ENST00000529476 HSMCR30P0CW71 290 aa11.84□□□□□ -0.51
USF1-209ENST00000529476 ZNF20P17024 532 aa11.84□□□□□ -0.51
USF1-209ENST00000529476 TNFRSF1AP19438 455 aa11.84□□□□□ -0.51
USF1-209ENST00000529476 THBS2P35442 1172 aa11.84□□□□□ -0.51
USF1-209ENST00000529476 SOX2P48431 317 aa11.84□□□□□ -0.51
USF1-209ENST00000529476 PDLIM4P50479 330 aa11.84□□□□□ -0.51
USF1-209ENST00000529476 MRPS11P82912 194 aaKnown RBP11.84□□□□□ -0.51
USF1-209ENST00000529476 MPPED2Q15777 294 aa11.84□□□□□ -0.51
USF1-209ENST00000529476 PLCXD3Q63HM9 321 aa11.84□□□□□ -0.51
USF1-209ENST00000529476 CLEC2AQ6UVW9 174 aa11.84□□□□□ -0.51
USF1-209ENST00000529476 WDR86Q86TI4 376 aa11.84□□□□□ -0.51
USF1-209ENST00000529476 MOGAT3Q86VF5 341 aa11.84□□□□□ -0.51
USF1-209ENST00000529476 SVOPQ8N4V2 548 aa11.84□□□□□ -0.51
USF1-209ENST00000529476 CELF2-AS1Q8N7Q2 184 aa11.84□□□□□ -0.51
USF1-209ENST00000529476 GPR148Q8TDV2 347 aa11.84□□□□□ -0.51
USF1-209ENST00000529476 TSEN15Q8WW01 171 aaKnown RBP11.84□□□□□ -0.51
USF1-209ENST00000529476 FAM168AQ92567 244 aa11.84□□□□□ -0.51
USF1-209ENST00000529476 HIST1H2AAQ96QV6 131 aa11.84□□□□□ -0.51
USF1-209ENST00000529476 MICU1Q9BPX6 476 aa11.84□□□□□ -0.51
USF1-209ENST00000529476 RTL8AQ9BWD3 113 aa11.84□□□□□ -0.51
USF1-209ENST00000529476 GCM1Q9NP62 436 aa11.84□□□□□ -0.51
USF1-209ENST00000529476 ABCB9Q9NP78 766 aa11.84□□□□□ -0.51
USF1-209ENST00000529476 MYOZ1Q9NP98 299 aaPredicted RBP11.84□□□□□ -0.51
USF1-209ENST00000529476 C14orf119Q9NWQ9 140 aa11.84□□□□□ -0.51
USF1-209ENST00000529476 DCAF16Q9NXF7 216 aa11.84□□□□□ -0.51
USF1-209ENST00000529476 DHDHQ9UQ10 334 aa11.84□□□□□ -0.51
USF1-209ENST00000529476 ZNF281Q9Y2X9 895 aa11.84□□□□□ -0.51
USF1-209ENST00000529476 TNFAIP8O95379 198 aa11.83□□□□□ -0.52
USF1-209ENST00000529476 CD1AP06126 327 aa11.83□□□□□ -0.52
USF1-209ENST00000529476 PCMT1P22061 227 aa11.83□□□□□ -0.52
USF1-209ENST00000529476 PMELP40967 661 aa11.83□□□□□ -0.52
USF1-209ENST00000529476 RPS11P62280 158 aaKnown RBP eCLIP11.83□□□□□ -0.52
USF1-209ENST00000529476 UBE2V2Q15819 145 aa11.83□□□□□ -0.52
USF1-209ENST00000529476 HFEQ30201 348 aa11.83□□□□□ -0.52
USF1-209ENST00000529476 CEACAM21Q3KPI0 293 aa11.83□□□□□ -0.52
USF1-209ENST00000529476 KCTD8Q6ZWB6 473 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms