RNA–Protein interactions for RNA: ENST00000527889.5

CD44-226, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-226ENST00000527889 FZD7O75084 574 aa3.65□□□□□ -1.83
CD44-226ENST00000527889 TRMUO75648 421 aaKnown RBP3.65□□□□□ -1.83
CD44-226ENST00000527889 GLCEO94923 617 aa3.65□□□□□ -1.83
CD44-226ENST00000527889 GLSO94925 669 aaPredicted RBP3.65□□□□□ -1.83
CD44-226ENST00000527889 PMS2P2O95744 297 aa3.65□□□□□ -1.83
CD44-226ENST00000527889 BCL10O95999 233 aa3.65□□□□□ -1.83
CD44-226ENST00000527889 LALBAP00709 142 aa3.65□□□□□ -1.83
CD44-226ENST00000527889 IGHMP01871 453 aa3.65□□□□□ -1.83
CD44-226ENST00000527889 HLA-DQA2P01906 255 aa3.65□□□□□ -1.83
CD44-226ENST00000527889 KRT8P05787 483 aa3.65□□□□□ -1.83
CD44-226ENST00000527889 CRYGCP07315 174 aa3.65□□□□□ -1.83
CD44-226ENST00000527889 NPSP0C0P6 89 aa3.65□□□□□ -1.83
CD44-226ENST00000527889 SBK2P0C263 348 aa3.65□□□□□ -1.83
CD44-226ENST00000527889 PSKH1P11801 424 aa3.65□□□□□ -1.83
CD44-226ENST00000527889 AREGP15514 252 aa3.65□□□□□ -1.83
CD44-226ENST00000527889 CTLA4P16410 223 aa3.65□□□□□ -1.83
CD44-226ENST00000527889 ZNF17P17021 662 aa3.65□□□□□ -1.83
CD44-226ENST00000527889 MSR1P21757 451 aa3.65□□□□□ -1.83
CD44-226ENST00000527889 RPS27P42677 84 aaKnown RBP3.65□□□□□ -1.83
CD44-226ENST00000527889 MAGEA5P43359 124 aa3.65□□□□□ -1.83
CD44-226ENST00000527889 TNFSF10P50591 281 aa3.65□□□□□ -1.83
CD44-226ENST00000527889 SLC25A1P53007 311 aa3.65□□□□□ -1.83
CD44-226ENST00000527889 BIDP55957 195 aa3.65□□□□□ -1.83
CD44-226ENST00000527889 WNT4P56705 351 aa3.65□□□□□ -1.83
CD44-226ENST00000527889 CLDN15P56746 228 aa3.65□□□□□ -1.83
CD44-226ENST00000527889 PPIAP62937 165 aaKnown RBP3.65□□□□□ -1.83
CD44-226ENST00000527889 SLC35A1P78382 337 aa3.65□□□□□ -1.83
CD44-226ENST00000527889 ZNF85Q03923 595 aa3.65□□□□□ -1.83
CD44-226ENST00000527889 SRYQ05066 204 aa3.65□□□□□ -1.83
CD44-226ENST00000527889 RASGEF1BQ0VAM2 473 aa3.65□□□□□ -1.83
CD44-226ENST00000527889 ZP4Q12836 540 aa3.65□□□□□ -1.83
CD44-226ENST00000527889 SNTB1Q13884 538 aaKnown RBP3.65□□□□□ -1.83
CD44-226ENST00000527889 C1DQ13901 141 aaKnown RBP3.65□□□□□ -1.83
CD44-226ENST00000527889 SPHARQ15513 63 aa3.65□□□□□ -1.83
CD44-226ENST00000527889 ETFDHQ16134 617 aa3.65□□□□□ -1.83
CD44-226ENST00000527889 SSX1Q16384 188 aa3.65□□□□□ -1.83
CD44-226ENST00000527889 C3AR1Q16581 482 aa3.65□□□□□ -1.83
CD44-226ENST00000527889 TP53I3Q53FA7 332 aa3.65□□□□□ -1.83
CD44-226ENST00000527889 CXorf66Q5JRM2 361 aaPredicted RBP3.65□□□□□ -1.83
CD44-226ENST00000527889 Q5PR19 223 aa3.65□□□□□ -1.83
CD44-226ENST00000527889 LINC01590Q5TEZ4 76 aa3.65□□□□□ -1.83
CD44-226ENST00000527889 LIPKQ5VXJ0 399 aa3.65□□□□□ -1.83
CD44-226ENST00000527889 CFAP77Q6ZQR2 320 aa3.65□□□□□ -1.83
CD44-226ENST00000527889 TMPPEQ6ZT21 453 aa3.65□□□□□ -1.83
CD44-226ENST00000527889 GGNQ86UU5 652 aa3.65□□□□□ -1.83
CD44-226ENST00000527889 ERI1Q8IV48 349 aaKnown RBP3.65□□□□□ -1.83
CD44-226ENST00000527889 UEVLDQ8IX04 471 aa3.65□□□□□ -1.83
CD44-226ENST00000527889 SLC35F2Q8IXU6 374 aa3.65□□□□□ -1.83
CD44-226ENST00000527889 FAM185AQ8N0U4 392 aa3.65□□□□□ -1.83
CD44-226ENST00000527889 OR6V1Q8N148 313 aa3.65□□□□□ -1.83
CD44-226ENST00000527889 UBE2J2Q8N2K1 259 aa3.65□□□□□ -1.83
CD44-226ENST00000527889 ARIH2OSQ8N7S6 290 aa3.65□□□□□ -1.83
CD44-226ENST00000527889 NHLRC2Q8NBF2 726 aa3.65□□□□□ -1.83
CD44-226ENST00000527889 ZNF248Q8NDW4 579 aa3.65□□□□□ -1.83
CD44-226ENST00000527889 OR10Z1Q8NGY1 313 aa3.65□□□□□ -1.83
CD44-226ENST00000527889 SPRYD4Q8WW59 207 aaPredicted RBP3.65□□□□□ -1.83
CD44-226ENST00000527889 FCGR1BQ92637 280 aa3.65□□□□□ -1.83
CD44-226ENST00000527889 CORO2AQ92828 525 aa3.65□□□□□ -1.83
CD44-226ENST00000527889 MIB2Q96AX9 1013 aa3.65□□□□□ -1.83
CD44-226ENST00000527889 SCMH1Q96GD3 660 aa3.65□□□□□ -1.83
CD44-226ENST00000527889 C5orf30Q96GV9 206 aa3.65□□□□□ -1.83
CD44-226ENST00000527889 WWC2-AS2Q96NR7 200 aa3.65□□□□□ -1.83
CD44-226ENST00000527889 OXGR1Q96P68 337 aa3.65□□□□□ -1.83
CD44-226ENST00000527889 CNN2Q99439 309 aaKnown RBP3.65□□□□□ -1.83
CD44-226ENST00000527889 MGLLQ99685 303 aa3.65□□□□□ -1.83
CD44-226ENST00000527889 PIGQQ9BRB3 760 aa3.65□□□□□ -1.83
CD44-226ENST00000527889 ZNF649Q9BS31 505 aa3.65□□□□□ -1.83
CD44-226ENST00000527889 DCUN1D5Q9BTE7 237 aa3.65□□□□□ -1.83
CD44-226ENST00000527889 CACNG6Q9BXT2 260 aa3.65□□□□□ -1.83
CD44-226ENST00000527889 GON7Q9BXV9 100 aa3.65□□□□□ -1.83
CD44-226ENST00000527889 MFFQ9GZY8 342 aa3.65□□□□□ -1.83
CD44-226ENST00000527889 NUAK2Q9H093 628 aa3.65□□□□□ -1.83
CD44-226ENST00000527889 RACGAP1Q9H0H5 632 aa3.65□□□□□ -1.83
CD44-226ENST00000527889 DEFB127Q9H1M4 99 aa3.65□□□□□ -1.83
CD44-226ENST00000527889 OR51E2Q9H255 320 aa3.65□□□□□ -1.83
CD44-226ENST00000527889 PLK3Q9H4B4 646 aa3.65□□□□□ -1.83
CD44-226ENST00000527889 RNF167Q9H6Y7 350 aa3.65□□□□□ -1.83
CD44-226ENST00000527889 ISG20L2Q9H9L3 353 aaKnown RBP3.65□□□□□ -1.83
CD44-226ENST00000527889 B4GALT7Q9UBV7 327 aa3.65□□□□□ -1.83
CD44-226ENST00000527889 ENPP5Q9UJA9 477 aa3.65□□□□□ -1.83
CD44-226ENST00000527889 ING1Q9UK53 422 aaPredicted RBP3.65□□□□□ -1.83
CD44-226ENST00000527889 COPS3Q9UNS2 423 aa3.65□□□□□ -1.83
CD44-226ENST00000527889 RNF24Q9Y225 148 aa3.65□□□□□ -1.83
CD44-226ENST00000527889 TRAPPC4Q9Y296 219 aa3.65□□□□□ -1.83
CD44-226ENST00000527889 B3GALT5Q9Y2C3 310 aa3.65□□□□□ -1.83
CD44-226ENST00000527889 KLHDC2Q9Y2U9 406 aa3.65□□□□□ -1.83
CD44-226ENST00000527889 DYSFO75923 2080 aa3.65□□□□□ -1.83
CD44-226ENST00000527889 FLNCQ14315 2725 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 ARID1AO14497 2285 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 A0A0A6YYH2 397 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 IGLV1-36A0A0B4J1U3 117 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 IGKV1D-43A0A0B4J1Z2 117 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 A0A0U1RQV5 110 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.64□□□□□ -1.83
CD44-226ENST00000527889 A0A1W2PNV4 684 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 A0A1W2PQL4 384 aaPredicted RBP3.64□□□□□ -1.83
CD44-226ENST00000527889 A6NIZ1 184 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 A6NJ64 397 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 GJE1A6NN92 205 aa3.64□□□□□ -1.83
CD44-226ENST00000527889 PRR32B1ATL7 298 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms