RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 ZNF705AQ6ZN79 300 aaPredicted RBP11.09□□□□□ -0.63
TSKU-203ENST00000527881 GAL3ST4Q96RP7 486 aa11.09□□□□□ -0.63
TSKU-203ENST00000527881 AK3Q9UIJ7 227 aa11.09□□□□□ -0.63
TSKU-203ENST00000527881 PITPNC1Q9UKF7 332 aa11.09□□□□□ -0.63
TSKU-203ENST00000527881 RFNGQ9Y644 331 aa11.09□□□□□ -0.63
TSKU-203ENST00000527881 CXorf51AA0A1B0GTR3 108 aa11.09□□□□□ -0.63
TSKU-203ENST00000527881 CST5P28325 142 aaPredicted RBP11.09□□□□□ -0.63
TSKU-203ENST00000527881 ZNF93P35789 620 aaPredicted RBP11.09□□□□□ -0.63
TSKU-203ENST00000527881 RND3P61587 244 aa11.09□□□□□ -0.63
TSKU-203ENST00000527881 DGAT2L6Q6ZPD8 337 aa11.09□□□□□ -0.63
TSKU-203ENST00000527881 CATSPERDQ86XM0 798 aa11.09□□□□□ -0.63
TSKU-203ENST00000527881 SLC35G3Q8N808 338 aa11.09□□□□□ -0.63
TSKU-203ENST00000527881 REEP6Q96HR9 211 aa11.09□□□□□ -0.63
TSKU-203ENST00000527881 CYYR1Q96J86 154 aa11.09□□□□□ -0.63
TSKU-203ENST00000527881 GPX7Q96SL4 187 aaPredicted RBP11.09□□□□□ -0.63
TSKU-203ENST00000527881 SNHG12Q9BXW3 62 aa11.09□□□□□ -0.63
TSKU-203ENST00000527881 MBNL1Q9NR56 388 aaKnown RBP11.09□□□□□ -0.63
TSKU-203ENST00000527881 FREM3P0C091 2139 aa11.09□□□□□ -0.63
TSKU-203ENST00000527881 HSPB2A8KAH6 182 aa11.08□□□□□ -0.63
TSKU-203ENST00000527881 E5RGE8 158 aa11.08□□□□□ -0.63
TSKU-203ENST00000527881 ZNF264O43296 627 aa11.08□□□□□ -0.63
TSKU-203ENST00000527881 SCGNO76038 276 aa11.08□□□□□ -0.63
TSKU-203ENST00000527881 SCGB1D1O95968 90 aa11.08□□□□□ -0.63
TSKU-203ENST00000527881 H2BFMP0C1H6 154 aa11.08□□□□□ -0.63
TSKU-203ENST00000527881 PNMTP11086 282 aa11.08□□□□□ -0.63
TSKU-203ENST00000527881 CFPP27918 469 aa11.08□□□□□ -0.63
TSKU-203ENST00000527881 RPL23AP62750 156 aaKnown RBP11.08□□□□□ -0.63
TSKU-203ENST00000527881 HSPB2Q16082 182 aa11.08□□□□□ -0.63
TSKU-203ENST00000527881 C1orf100Q5SVJ3 147 aa11.08□□□□□ -0.63
TSKU-203ENST00000527881 WBP2NLQ6ICG8 309 aa11.08□□□□□ -0.63
TSKU-203ENST00000527881 ALKBH2Q6NS38 261 aa11.08□□□□□ -0.63
TSKU-203ENST00000527881 TMEM123Q8N131 208 aa11.08□□□□□ -0.63
TSKU-203ENST00000527881 ZNF558Q96NG5 402 aa11.08□□□□□ -0.63
TSKU-203ENST00000527881 CABLES2Q9BTV7 478 aa11.08□□□□□ -0.63
TSKU-203ENST00000527881 WFDC1Q9HC57 220 aa11.08□□□□□ -0.63
TSKU-203ENST00000527881 NSG2Q9Y328 171 aa11.08□□□□□ -0.63
TSKU-203ENST00000527881 TET1Q8NFU7 2136 aa11.08□□□□□ -0.64
TSKU-203ENST00000527881 FIGNL2A6NMB9 653 aa11.08□□□□□ -0.64
TSKU-203ENST00000527881 A6NNC1 897 aa11.08□□□□□ -0.64
TSKU-203ENST00000527881 HRKO00198 91 aa11.08□□□□□ -0.64
TSKU-203ENST00000527881 SLC33A1O00400 549 aaPredicted RBP11.08□□□□□ -0.64
TSKU-203ENST00000527881 PGA3P0DJD8 388 aa11.08□□□□□ -0.64
TSKU-203ENST00000527881 IGFBP3P17936 291 aaPredicted RBP11.08□□□□□ -0.64
TSKU-203ENST00000527881 MAS1LP35410 378 aa11.08□□□□□ -0.64
TSKU-203ENST00000527881 CCR2P41597 374 aa11.08□□□□□ -0.64
TSKU-203ENST00000527881 P2RY1P47900 373 aa11.08□□□□□ -0.64
TSKU-203ENST00000527881 RAB11AP62491 216 aa11.08□□□□□ -0.64
TSKU-203ENST00000527881 CLEC12BQ2HXU8 276 aa11.08□□□□□ -0.64
TSKU-203ENST00000527881 HIKESHIQ53FT3 197 aa11.08□□□□□ -0.64
TSKU-203ENST00000527881 ZNF880Q6PDB4 577 aa11.08□□□□□ -0.64
TSKU-203ENST00000527881 SNIP1Q8TAD8 396 aaKnown RBP11.08□□□□□ -0.64
TSKU-203ENST00000527881 ARHGAP5-AS1Q96IT6 56 aa11.08□□□□□ -0.64
TSKU-203ENST00000527881 SCRT1Q9BWW7 348 aa11.08□□□□□ -0.64
TSKU-203ENST00000527881 TMEM59Q9BXS4 323 aa11.08□□□□□ -0.64
TSKU-203ENST00000527881 PHPT1Q9NRX4 125 aaPredicted RBP11.08□□□□□ -0.64
TSKU-203ENST00000527881 B3GALT1Q9Y5Z6 326 aa11.08□□□□□ -0.64
TSKU-203ENST00000527881 LOC101059948A0A1B0GTJ6 334 aa11.08□□□□□ -0.64
TSKU-203ENST00000527881 FSTP19883 344 aa11.08□□□□□ -0.64
TSKU-203ENST00000527881 PPM1AP35813 382 aa11.08□□□□□ -0.64
TSKU-203ENST00000527881 ADAMTSL4Q6UY14 1074 aa11.08□□□□□ -0.64
TSKU-203ENST00000527881 DCXRQ7Z4W1 244 aa11.08□□□□□ -0.64
TSKU-203ENST00000527881 GPR137CQ8N3F9 429 aa11.08□□□□□ -0.64
TSKU-203ENST00000527881 OR5D18Q8NGL1 313 aa11.08□□□□□ -0.64
TSKU-203ENST00000527881 EMG1Q92979 244 aaKnown RBP11.08□□□□□ -0.64
TSKU-203ENST00000527881 COX14Q96I36 57 aa11.08□□□□□ -0.64
TSKU-203ENST00000527881 ABHD14AQ9BUJ0 271 aa11.08□□□□□ -0.64
TSKU-203ENST00000527881 MRPS28Q9Y2Q9 187 aaKnown RBP11.08□□□□□ -0.64
TSKU-203ENST00000527881 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.07□□□□□ -0.64
TSKU-203ENST00000527881 A0A1W2PP11 408 aa11.07□□□□□ -0.64
TSKU-203ENST00000527881 TNFSF12O43508 249 aa11.07□□□□□ -0.64
TSKU-203ENST00000527881 BPNT1O95861 308 aa11.07□□□□□ -0.64
TSKU-203ENST00000527881 PTGER4P35408 488 aa11.07□□□□□ -0.64
TSKU-203ENST00000527881 IDH3GP51553 393 aaPredicted RBP11.07□□□□□ -0.64
TSKU-203ENST00000527881 RAB38P57729 211 aa11.07□□□□□ -0.64
TSKU-203ENST00000527881 OR13D1Q8NGV5 346 aa11.07□□□□□ -0.64
TSKU-203ENST00000527881 OR52N5Q8NH56 324 aa11.07□□□□□ -0.64
TSKU-203ENST00000527881 PTX4Q96A99 478 aa11.07□□□□□ -0.64
TSKU-203ENST00000527881 YPEL4Q96NS1 127 aa11.07□□□□□ -0.64
TSKU-203ENST00000527881 CCDC3Q9BQI4 270 aa11.07□□□□□ -0.64
TSKU-203ENST00000527881 COA3Q9Y2R0 106 aaPredicted RBP11.07□□□□□ -0.64
TSKU-203ENST00000527881 R4GMQ9 66 aa11.07□□□□□ -0.64
TSKU-203ENST00000527881 EML5Q05BV3 1969 aa11.07□□□□□ -0.64
TSKU-203ENST00000527881 CCDC187A0A096LP49 1063 aa11.07□□□□□ -0.64
TSKU-203ENST00000527881 CCDC163A0A0D9SF12 145 aa11.07□□□□□ -0.64
TSKU-203ENST00000527881 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.07□□□□□ -0.64
TSKU-203ENST00000527881 FAM230AA0A1W2PPH8 454 aa11.07□□□□□ -0.64
TSKU-203ENST00000527881 CTSVO60911 334 aa11.07□□□□□ -0.64
TSKU-203ENST00000527881 PVRP15151 417 aa11.07□□□□□ -0.64
TSKU-203ENST00000527881 HIST1H1DP16402 221 aaKnown RBP11.07□□□□□ -0.64
TSKU-203ENST00000527881 CTLA4P16410 223 aa11.07□□□□□ -0.64
TSKU-203ENST00000527881 WASP42768 502 aa11.07□□□□□ -0.64
TSKU-203ENST00000527881 GLIPR1P48060 266 aa11.07□□□□□ -0.64
TSKU-203ENST00000527881 VAMP2P63027 116 aa11.07□□□□□ -0.64
TSKU-203ENST00000527881 H3F3AP84243 136 aa11.07□□□□□ -0.64
TSKU-203ENST00000527881 SP3Q02447 781 aa11.07□□□□□ -0.64
TSKU-203ENST00000527881 ABCA11PQ4W5N1 156 aa11.07□□□□□ -0.64
TSKU-203ENST00000527881 TCEAL5Q5H9L2 206 aa11.07□□□□□ -0.64
TSKU-203ENST00000527881 FDX2Q6P4F2 183 aa11.07□□□□□ -0.64
TSKU-203ENST00000527881 CBLN3Q6UW01 205 aa11.07□□□□□ -0.64
TSKU-203ENST00000527881 FAM185AQ8N0U4 392 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms