RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 H1FNTQ75WM6 255 aaPredicted RBP11.07□□□□□ -0.64
CAPN1-208ENST00000527323 ABHD12BQ7Z5M8 362 aaPredicted RBP11.07□□□□□ -0.64
CAPN1-208ENST00000527323 ASB10Q8WXI3 467 aa11.07□□□□□ -0.64
CAPN1-208ENST00000527323 MAFIPQ8WZ33 124 aa11.07□□□□□ -0.64
CAPN1-208ENST00000527323 TMEM230Q96A57 120 aa11.07□□□□□ -0.64
CAPN1-208ENST00000527323 FAM71F1Q96KD3 344 aaPredicted RBP11.07□□□□□ -0.64
CAPN1-208ENST00000527323 SULT4A1Q9BR01 284 aa11.07□□□□□ -0.64
CAPN1-208ENST00000527323 WWTR1Q9GZV5 400 aa11.07□□□□□ -0.64
CAPN1-208ENST00000527323 LPAR5Q9H1C0 372 aa11.07□□□□□ -0.64
CAPN1-208ENST00000527323 PCNX3Q9H6A9 2034 aa11.07□□□□□ -0.64
CAPN1-208ENST00000527323 A0A1W2PQD3 144 aa11.06□□□□□ -0.64
CAPN1-208ENST00000527323 H3BML4 177 aa11.06□□□□□ -0.64
CAPN1-208ENST00000527323 IGHMP01871 453 aa11.06□□□□□ -0.64
CAPN1-208ENST00000527323 S100A6P06703 90 aa11.06□□□□□ -0.64
CAPN1-208ENST00000527323 CBR1P16152 277 aa11.06□□□□□ -0.64
CAPN1-208ENST00000527323 BIDP55957 195 aa11.06□□□□□ -0.64
CAPN1-208ENST00000527323 GPR85P60893 370 aa11.06□□□□□ -0.64
CAPN1-208ENST00000527323 HSF1Q00613 529 aa11.06□□□□□ -0.64
CAPN1-208ENST00000527323 PLAC9Q5JTB6 97 aa11.06□□□□□ -0.64
CAPN1-208ENST00000527323 PMS2CLQ68D20 193 aa11.06□□□□□ -0.64
CAPN1-208ENST00000527323 DRAM2Q6UX65 266 aa11.06□□□□□ -0.64
CAPN1-208ENST00000527323 C16orf47Q6ZP98 133 aaPredicted RBP11.06□□□□□ -0.64
CAPN1-208ENST00000527323 WDFY1Q8IWB7 410 aa11.06□□□□□ -0.64
CAPN1-208ENST00000527323 SVIPQ8NHG7 77 aa11.06□□□□□ -0.64
CAPN1-208ENST00000527323 THAP3Q8WTV1 239 aaPredicted RBP11.06□□□□□ -0.64
CAPN1-208ENST00000527323 TMEM234Q8WY98 164 aa11.06□□□□□ -0.64
CAPN1-208ENST00000527323 CYYR1Q96J86 154 aa11.06□□□□□ -0.64
CAPN1-208ENST00000527323 ZC3H10Q96K80 434 aaKnown RBP11.06□□□□□ -0.64
CAPN1-208ENST00000527323 C2orf50Q96LR7 162 aa11.06□□□□□ -0.64
CAPN1-208ENST00000527323 TMEM59Q9BXS4 323 aa11.06□□□□□ -0.64
CAPN1-208ENST00000527323 SLC22A11Q9NSA0 550 aa11.06□□□□□ -0.64
CAPN1-208ENST00000527323 TMEM14DPA8MWL7 114 aa11.06□□□□□ -0.64
CAPN1-208ENST00000527323 PET100P0DJ07 73 aa11.06□□□□□ -0.64
CAPN1-208ENST00000527323 RCC1P18754 421 aaPredicted RBP11.06□□□□□ -0.64
CAPN1-208ENST00000527323 LPAR6P43657 344 aa11.06□□□□□ -0.64
CAPN1-208ENST00000527323 OR3A4PP47883 348 aa11.06□□□□□ -0.64
CAPN1-208ENST00000527323 CSNK2A1P68400 391 aaPredicted RBP11.06□□□□□ -0.64
CAPN1-208ENST00000527323 SMCO1Q147U7 214 aa11.06□□□□□ -0.64
CAPN1-208ENST00000527323 ARRDC1Q8N5I2 433 aa11.06□□□□□ -0.64
CAPN1-208ENST00000527323 CSNK2A3Q8NEV1 391 aa11.06□□□□□ -0.64
CAPN1-208ENST00000527323 KCNG3Q8TAE7 436 aa11.06□□□□□ -0.64
CAPN1-208ENST00000527323 C14orf79Q96F83 325 aa11.06□□□□□ -0.64
CAPN1-208ENST00000527323 ARHGAP5-AS1Q96IT6 56 aa11.06□□□□□ -0.64
CAPN1-208ENST00000527323 NUP210LQ5VU65 1888 aa11.06□□□□□ -0.64
CAPN1-208ENST00000527323 OPN1LWP04000 364 aa11.05□□□□□ -0.64
CAPN1-208ENST00000527323 CSTBP04080 98 aaKnown RBP11.05□□□□□ -0.64
CAPN1-208ENST00000527323 S100A9P06702 114 aaKnown RBP11.05□□□□□ -0.64
CAPN1-208ENST00000527323 GSTP1P09211 210 aaKnown RBP11.05□□□□□ -0.64
CAPN1-208ENST00000527323 FOLR1P15328 257 aa11.05□□□□□ -0.64
CAPN1-208ENST00000527323 HIST1H1DP16402 221 aaKnown RBP11.05□□□□□ -0.64
CAPN1-208ENST00000527323 PTGFRP43088 359 aa11.05□□□□□ -0.64
CAPN1-208ENST00000527323 C14orf28Q4W4Y0 310 aa11.05□□□□□ -0.64
CAPN1-208ENST00000527323 OR2AJ1Q8NGZ0 328 aa11.05□□□□□ -0.64
CAPN1-208ENST00000527323 NANPQ8TBE9 248 aa11.05□□□□□ -0.64
CAPN1-208ENST00000527323 DNASE2BQ8WZ79 361 aa11.05□□□□□ -0.64
CAPN1-208ENST00000527323 SAT2Q96F10 170 aaPredicted RBP11.05□□□□□ -0.64
CAPN1-208ENST00000527323 SOX7Q9BT81 388 aa11.05□□□□□ -0.64
CAPN1-208ENST00000527323 SMIM3Q9BZL3 60 aa11.05□□□□□ -0.64
CAPN1-208ENST00000527323 PARP12Q9H0J9 701 aaKnown RBP11.05□□□□□ -0.64
CAPN1-208ENST00000527323 GPR27Q9NS67 375 aa11.05□□□□□ -0.64
CAPN1-208ENST00000527323 A0A0A6YYD4 124 aa11.05□□□□□ -0.64
CAPN1-208ENST00000527323 IFNA4P05014 189 aa11.05□□□□□ -0.64
CAPN1-208ENST00000527323 ADH6P28332 368 aa11.05□□□□□ -0.64
CAPN1-208ENST00000527323 ID4P47928 161 aa11.05□□□□□ -0.64
CAPN1-208ENST00000527323 GABRA4P48169 554 aa11.05□□□□□ -0.64
CAPN1-208ENST00000527323 GSK3AP49840 483 aa11.05□□□□□ -0.64
CAPN1-208ENST00000527323 NAA40Q86UY6 237 aa11.05□□□□□ -0.64
CAPN1-208ENST00000527323 ADAMTS17Q8TE56 1095 aa11.05□□□□□ -0.64
CAPN1-208ENST00000527323 KCNK17Q96T54 332 aa11.05□□□□□ -0.64
CAPN1-208ENST00000527323 SLC26A1Q9H2B4 701 aa11.05□□□□□ -0.64
CAPN1-208ENST00000527323 AKIRIN1Q9H9L7 192 aaPredicted RBP11.05□□□□□ -0.64
CAPN1-208ENST00000527323 RPS10P5Q9NQ39 176 aa11.05□□□□□ -0.64
CAPN1-208ENST00000527323 SMCO4Q9NRQ5 59 aa11.05□□□□□ -0.64
CAPN1-208ENST00000527323 EHFQ9NZC4 300 aa11.05□□□□□ -0.64
CAPN1-208ENST00000527323 PILRBQ9UKJ0 227 aa11.05□□□□□ -0.64
CAPN1-208ENST00000527323 MEMO1Q9Y316 297 aa11.05□□□□□ -0.64
CAPN1-208ENST00000527323 PCDHGA1Q9Y5H4 931 aa11.05□□□□□ -0.64
CAPN1-208ENST00000527323 CDC14BO60729 498 aa11.05□□□□□ -0.64
CAPN1-208ENST00000527323 EIF3GO75821 320 aaKnown RBP eCLIP11.05□□□□□ -0.64
CAPN1-208ENST00000527323 FOXK1P85037 733 aa11.05□□□□□ -0.64
CAPN1-208ENST00000527323 ACTBL2Q562R1 376 aa11.05□□□□□ -0.64
CAPN1-208ENST00000527323 ETV3LQ6ZN32 361 aa11.05□□□□□ -0.64
CAPN1-208ENST00000527323 OR51T1Q8NGJ9 327 aa11.05□□□□□ -0.64
CAPN1-208ENST00000527323 OR5D18Q8NGL1 313 aa11.05□□□□□ -0.64
CAPN1-208ENST00000527323 AKR1E2Q96JD6 320 aa11.05□□□□□ -0.64
CAPN1-208ENST00000527323 AQP10Q96PS8 301 aa11.05□□□□□ -0.64
CAPN1-208ENST00000527323 SUSD2Q9UGT4 822 aa11.05□□□□□ -0.64
CAPN1-208ENST00000527323 PMS2P1A4D2B8 440 aa11.04□□□□□ -0.64
CAPN1-208ENST00000527323 C1orf196B1AJZ1 125 aa11.04□□□□□ -0.64
CAPN1-208ENST00000527323 SHISA8B8ZZ34 492 aa11.04□□□□□ -0.64
CAPN1-208ENST00000527323 FTCDNL1E5RQL4 147 aa11.04□□□□□ -0.64
CAPN1-208ENST00000527323 RAD51DO75771 328 aa11.04□□□□□ -0.64
CAPN1-208ENST00000527323 TMEM50BP56557 158 aa11.04□□□□□ -0.64
CAPN1-208ENST00000527323 FBXW4P57775 412 aa11.04□□□□□ -0.64
CAPN1-208ENST00000527323 S100A12P80511 92 aa11.04□□□□□ -0.64
CAPN1-208ENST00000527323 VAX1Q5SQQ9 334 aa11.04□□□□□ -0.64
CAPN1-208ENST00000527323 CARD17Q5XLA6 110 aa11.04□□□□□ -0.64
CAPN1-208ENST00000527323 SKA3Q8IX90 412 aa11.04□□□□□ -0.64
CAPN1-208ENST00000527323 NPRL2Q8WTW4 380 aa11.04□□□□□ -0.64
CAPN1-208ENST00000527323 ZNF285Q96NJ3 590 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms