RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 BRD7Q9NPI1 651 aa11.11□□□□□ -0.63
CAPN1-207ENST00000527189 LAMP5Q9UJQ1 280 aa11.11□□□□□ -0.63
CAPN1-207ENST00000527189 RHBDD3Q9Y3P4 386 aa11.11□□□□□ -0.63
CAPN1-207ENST00000527189 IGHV3OR16-10A0A075B7F0 116 aa11.1□□□□□ -0.63
CAPN1-207ENST00000527189 DVL1O14640 695 aa11.1□□□□□ -0.63
CAPN1-207ENST00000527189 TMPRSS2O15393 492 aa11.1□□□□□ -0.63
CAPN1-207ENST00000527189 ZNF254O75437 659 aa11.1□□□□□ -0.63
CAPN1-207ENST00000527189 VHLP40337 213 aa11.1□□□□□ -0.63
CAPN1-207ENST00000527189 CRISP1P54107 249 aa11.1□□□□□ -0.63
CAPN1-207ENST00000527189 PSMA6P60900 246 aaKnown RBP11.1□□□□□ -0.63
CAPN1-207ENST00000527189 RPS7P62081 194 aaKnown RBP11.1□□□□□ -0.63
CAPN1-207ENST00000527189 IL13RA1P78552 427 aa11.1□□□□□ -0.63
CAPN1-207ENST00000527189 HOXA4Q00056 320 aaPredicted RBP11.1□□□□□ -0.63
CAPN1-207ENST00000527189 SNAPC1Q16533 368 aa11.1□□□□□ -0.63
CAPN1-207ENST00000527189 ATPAF1Q5TC12 328 aaPredicted RBP11.1□□□□□ -0.63
CAPN1-207ENST00000527189 METTL11BQ5VVY1 283 aa11.1□□□□□ -0.63
CAPN1-207ENST00000527189 SHISA2Q6UWI4 295 aa11.1□□□□□ -0.63
CAPN1-207ENST00000527189 BTN2A1Q7KYR7 527 aa11.1□□□□□ -0.63
CAPN1-207ENST00000527189 SLC36A1Q7Z2H8 476 aa11.1□□□□□ -0.63
CAPN1-207ENST00000527189 OR10Z1Q8NGY1 313 aa11.1□□□□□ -0.63
CAPN1-207ENST00000527189 OR5P3Q8WZ94 311 aa11.1□□□□□ -0.63
CAPN1-207ENST00000527189 FAM71F1Q96KD3 344 aaPredicted RBP11.1□□□□□ -0.63
CAPN1-207ENST00000527189 PCGF1Q9BSM1 259 aa11.1□□□□□ -0.63
CAPN1-207ENST00000527189 DNTTIP1Q9H147 329 aa11.1□□□□□ -0.63
CAPN1-207ENST00000527189 CNTD2Q9H8S5 307 aa11.1□□□□□ -0.63
CAPN1-207ENST00000527189 SMURF1Q9HCE7 757 aa11.1□□□□□ -0.63
CAPN1-207ENST00000527189 PAPOLBQ9NRJ5 636 aaKnown RBP11.1□□□□□ -0.63
CAPN1-207ENST00000527189 TMEM14AQ9Y6G1 99 aa11.1□□□□□ -0.63
CAPN1-207ENST00000527189 NBEAL2Q6ZNJ1 2754 aa11.09□□□□□ -0.63
CAPN1-207ENST00000527189 A0A0U1RQV5 110 aa11.09□□□□□ -0.63
CAPN1-207ENST00000527189 SRRM5B3KS81 715 aa11.09□□□□□ -0.63
CAPN1-207ENST00000527189 CDIPTO14735 213 aa11.09□□□□□ -0.63
CAPN1-207ENST00000527189 ATP6V1B1P15313 513 aa11.09□□□□□ -0.63
CAPN1-207ENST00000527189 EGR1P18146 543 aa11.09□□□□□ -0.63
CAPN1-207ENST00000527189 ESRRGP62508 458 aa11.09□□□□□ -0.63
CAPN1-207ENST00000527189 PRDX4Q13162 271 aa11.09□□□□□ -0.63
CAPN1-207ENST00000527189 GFOD2Q3B7J2 385 aa11.09□□□□□ -0.63
CAPN1-207ENST00000527189 LCN1P1Q5VSP4 162 aa11.09□□□□□ -0.63
CAPN1-207ENST00000527189 TMEM236Q5W0B7 351 aa11.09□□□□□ -0.63
CAPN1-207ENST00000527189 FAHD1Q6P587 224 aa11.09□□□□□ -0.63
CAPN1-207ENST00000527189 Q6YL49 198 aa11.09□□□□□ -0.63
CAPN1-207ENST00000527189 KRT77Q7Z794 578 aa11.09□□□□□ -0.63
CAPN1-207ENST00000527189 TMEM86BQ8N661 226 aa11.09□□□□□ -0.63
CAPN1-207ENST00000527189 GATAD2BQ8WXI9 593 aa11.09□□□□□ -0.63
CAPN1-207ENST00000527189 ASB17Q8WXJ9 295 aa11.09□□□□□ -0.63
CAPN1-207ENST00000527189 ZDHHC16Q969W1 377 aa11.09□□□□□ -0.63
CAPN1-207ENST00000527189 DUX5Q96PT3 197 aa11.09□□□□□ -0.63
CAPN1-207ENST00000527189 HIST1H2AAQ96QV6 131 aa11.09□□□□□ -0.63
CAPN1-207ENST00000527189 MROQ9BYG7 248 aa11.09□□□□□ -0.63
CAPN1-207ENST00000527189 PRRG3Q9BZD7 231 aa11.09□□□□□ -0.63
CAPN1-207ENST00000527189 S100A14Q9HCY8 104 aa11.09□□□□□ -0.63
CAPN1-207ENST00000527189 TVP23BQ9NYZ1 205 aa11.09□□□□□ -0.63
CAPN1-207ENST00000527189 LRP12Q9Y561 859 aa11.09□□□□□ -0.63
CAPN1-207ENST00000527189 KPTNQ9Y664 436 aa11.09□□□□□ -0.63
CAPN1-207ENST00000527189 CENPVL3A0A0U1RRI6 287 aa11.08□□□□□ -0.64
CAPN1-207ENST00000527189 A0A1B0GUS0 222 aa11.08□□□□□ -0.64
CAPN1-207ENST00000527189 ZNF850A8MQ14 1090 aa11.08□□□□□ -0.64
CAPN1-207ENST00000527189 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.08□□□□□ -0.64
CAPN1-207ENST00000527189 NDUFB3O43676 98 aa11.08□□□□□ -0.64
CAPN1-207ENST00000527189 SFTPBP07988 381 aa11.08□□□□□ -0.64
CAPN1-207ENST00000527189 ACKR3P25106 362 aa11.08□□□□□ -0.64
CAPN1-207ENST00000527189 MAP2K3P46734 347 aa11.08□□□□□ -0.64
CAPN1-207ENST00000527189 TGM4P49221 684 aa11.08□□□□□ -0.64
CAPN1-207ENST00000527189 CSNK2BP67870 215 aa11.08□□□□□ -0.64
CAPN1-207ENST00000527189 ROM1Q03395 351 aa11.08□□□□□ -0.64
CAPN1-207ENST00000527189 APOFQ13790 326 aa11.08□□□□□ -0.64
CAPN1-207ENST00000527189 PTGES3Q15185 160 aaKnown RBP11.08□□□□□ -0.64
CAPN1-207ENST00000527189 DEFB112Q30KQ8 113 aa11.08□□□□□ -0.64
CAPN1-207ENST00000527189 CDONQ4KMG0 1287 aa11.08□□□□□ -0.64
CAPN1-207ENST00000527189 BRD3OSQ6XYD6 125 aa11.08□□□□□ -0.64
CAPN1-207ENST00000527189 ZNF679Q8IYX0 411 aa11.08□□□□□ -0.64
CAPN1-207ENST00000527189 LY6G5BQ8NDX9 201 aa11.08□□□□□ -0.64
CAPN1-207ENST00000527189 BBS1Q8NFJ9 593 aa11.08□□□□□ -0.64
CAPN1-207ENST00000527189 OR8B12Q8NGG6 310 aa11.08□□□□□ -0.64
CAPN1-207ENST00000527189 OR5K1Q8NHB7 308 aa11.08□□□□□ -0.64
CAPN1-207ENST00000527189 PIGCQ92535 297 aa11.08□□□□□ -0.64
CAPN1-207ENST00000527189 TBX15Q96SF7 602 aa11.08□□□□□ -0.64
CAPN1-207ENST00000527189 MNTQ99583 582 aa11.08□□□□□ -0.64
CAPN1-207ENST00000527189 CCL13Q99616 98 aa11.08□□□□□ -0.64
CAPN1-207ENST00000527189 PKP2Q99959 881 aa11.08□□□□□ -0.64
CAPN1-207ENST00000527189 SIRPDQ9H106 197 aa11.08□□□□□ -0.64
CAPN1-207ENST00000527189 ACOXLQ9NUZ1 547 aa11.08□□□□□ -0.64
CAPN1-207ENST00000527189 HAO2Q9NYQ3 351 aa11.08□□□□□ -0.64
CAPN1-207ENST00000527189 RPUSD1Q9UJJ7 312 aaKnown RBP11.08□□□□□ -0.64
CAPN1-207ENST00000527189 PCDHGB1Q9Y5G3 927 aa11.08□□□□□ -0.64
CAPN1-207ENST00000527189 POMT1Q9Y6A1 747 aa11.08□□□□□ -0.64
CAPN1-207ENST00000527189 CMYA5Q8N3K9 4069 aa11.07□□□□□ -0.64
CAPN1-207ENST00000527189 IGHV3OR15-7A0A075B7D8 119 aa11.07□□□□□ -0.64
CAPN1-207ENST00000527189 ZNF816-ZNF321PA0A0X1KG74 233 aa11.07□□□□□ -0.64
CAPN1-207ENST00000527189 TMEM269A0A1B0GVZ9 245 aa11.07□□□□□ -0.64
CAPN1-207ENST00000527189 HOXA3O43365 443 aaPredicted RBP11.07□□□□□ -0.64
CAPN1-207ENST00000527189 FCN3O75636 299 aa11.07□□□□□ -0.64
CAPN1-207ENST00000527189 FCGR1AP12314 374 aa11.07□□□□□ -0.64
CAPN1-207ENST00000527189 DAPP51397 102 aa11.07□□□□□ -0.64
CAPN1-207ENST00000527189 RPL15P61313 204 aaKnown RBP11.07□□□□□ -0.64
CAPN1-207ENST00000527189 ARF6P62330 175 aa11.07□□□□□ -0.64
CAPN1-207ENST00000527189 POU4F2Q12837 409 aa11.07□□□□□ -0.64
CAPN1-207ENST00000527189 WDR38Q5JTN6 314 aa11.07□□□□□ -0.64
CAPN1-207ENST00000527189 ZBTB37Q5TC79 503 aa11.07□□□□□ -0.64
CAPN1-207ENST00000527189 METAP1DQ6UB28 335 aaPredicted RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms