RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 Q6ZS92 163 aa2.79□□□□□ -1.96
CD44-219ENST00000525685 TMEM179BQ7Z7N9 219 aa2.79□□□□□ -1.96
CD44-219ENST00000525685 COMTD1Q86VU5 262 aa2.79□□□□□ -1.96
CD44-219ENST00000525685 ST13P4Q8IZP2 240 aaPredicted RBP2.79□□□□□ -1.96
CD44-219ENST00000525685 LRRC25Q8N386 305 aaPredicted RBP2.79□□□□□ -1.96
CD44-219ENST00000525685 GPR137CQ8N3F9 429 aa2.79□□□□□ -1.96
CD44-219ENST00000525685 ZNF565Q8N9K5 539 aa2.79□□□□□ -1.96
CD44-219ENST00000525685 MORN4Q8NDC4 146 aa2.79□□□□□ -1.96
CD44-219ENST00000525685 OR9A2Q8NGT5 310 aa2.79□□□□□ -1.96
CD44-219ENST00000525685 CLHC1Q8NHS4 586 aa2.79□□□□□ -1.96
CD44-219ENST00000525685 RAB3IL1Q8TBN0 382 aa2.79□□□□□ -1.96
CD44-219ENST00000525685 M1APQ8TC57 530 aa2.79□□□□□ -1.96
CD44-219ENST00000525685 DOK4Q8TEW6 326 aa2.79□□□□□ -1.96
CD44-219ENST00000525685 ZNF721Q8TF20 911 aa2.79□□□□□ -1.96
CD44-219ENST00000525685 EXOSC8Q96B26 276 aaKnown RBP2.79□□□□□ -1.96
CD44-219ENST00000525685 PPWD1Q96BP3 646 aaKnown RBP2.79□□□□□ -1.96
CD44-219ENST00000525685 PPP1R36Q96LQ0 422 aa2.79□□□□□ -1.96
CD44-219ENST00000525685 PPP3R2Q96LZ3 170 aa2.79□□□□□ -1.96
CD44-219ENST00000525685 ZNF681Q96N22 645 aa2.79□□□□□ -1.96
CD44-219ENST00000525685 TSSK3Q96PN8 268 aa2.79□□□□□ -1.96
CD44-219ENST00000525685 BCL7BQ9BQE9 202 aa2.79□□□□□ -1.96
CD44-219ENST00000525685 PELOQ9BRX2 385 aaKnown RBP2.79□□□□□ -1.96
CD44-219ENST00000525685 C1orf50Q9BV19 199 aa2.79□□□□□ -1.96
CD44-219ENST00000525685 FAIM2Q9BWQ8 316 aa2.79□□□□□ -1.96
CD44-219ENST00000525685 OR8D2Q9GZM6 311 aa2.79□□□□□ -1.96
CD44-219ENST00000525685 Q9H3A6 140 aa2.79□□□□□ -1.96
CD44-219ENST00000525685 NANSQ9NR45 359 aa2.79□□□□□ -1.96
CD44-219ENST00000525685 C1orf109Q9NX04 203 aa2.79□□□□□ -1.96
CD44-219ENST00000525685 MAT2BQ9NZL9 334 aa2.79□□□□□ -1.96
CD44-219ENST00000525685 MARCOQ9UEW3 520 aaPredicted RBP2.79□□□□□ -1.96
CD44-219ENST00000525685 CES1P1Q9UKY3 287 aa2.79□□□□□ -1.96
CD44-219ENST00000525685 AURKCQ9UQB9 309 aa2.79□□□□□ -1.96
CD44-219ENST00000525685 RNF6Q9Y252 685 aa2.79□□□□□ -1.96
CD44-219ENST00000525685 L3MBTL1Q9Y468 752 aa2.79□□□□□ -1.96
CD44-219ENST00000525685 MAP1BP46821 2468 aaKnown RBP2.79□□□□□ -1.96
CD44-219ENST00000525685 URB1O60287 2271 aaKnown RBP2.79□□□□□ -1.96
CD44-219ENST00000525685 KNTC1P50748 2209 aa2.78□□□□□ -1.96
CD44-219ENST00000525685 KMT2BQ9UMN6 2715 aaPredicted RBP2.78□□□□□ -1.96
CD44-219ENST00000525685 USP24Q9UPU5 2620 aa2.78□□□□□ -1.96
CD44-219ENST00000525685 IGF2RP11717 2491 aa2.78□□□□□ -1.96
CD44-219ENST00000525685 ASPMQ8IZT6 3477 aa2.78□□□□□ -1.96
CD44-219ENST00000525685 A0A087WZY1 265 aa2.78□□□□□ -1.96
CD44-219ENST00000525685 GABRR3A8MPY1 467 aa2.78□□□□□ -1.96
CD44-219ENST00000525685 A8MUI8 341 aa2.78□□□□□ -1.96
CD44-219ENST00000525685 SCAMP2O15127 329 aaKnown RBP2.78□□□□□ -1.96
CD44-219ENST00000525685 TBX19O60806 448 aa2.78□□□□□ -1.96
CD44-219ENST00000525685 SMPD2O60906 423 aa2.78□□□□□ -1.96
CD44-219ENST00000525685 NOL3O60936 208 aaKnown RBP2.78□□□□□ -1.96
CD44-219ENST00000525685 LRATO95237 230 aa2.78□□□□□ -1.96
CD44-219ENST00000525685 KRTAP1-4P0C5Y4 121 aa2.78□□□□□ -1.96
CD44-219ENST00000525685 UBTFL6P0CB48 400 aaPredicted RBP2.78□□□□□ -1.96
CD44-219ENST00000525685 PRPS2P11908 318 aa2.78□□□□□ -1.96
CD44-219ENST00000525685 ICAM2P13598 275 aa2.78□□□□□ -1.96
CD44-219ENST00000525685 CPMP14384 443 aa2.78□□□□□ -1.96
CD44-219ENST00000525685 CSNK2A2P19784 350 aaPredicted RBP2.78□□□□□ -1.96
CD44-219ENST00000525685 SERPINA2P20848 420 aa2.78□□□□□ -1.96
CD44-219ENST00000525685 NTSP30990 170 aa2.78□□□□□ -1.96
CD44-219ENST00000525685 CBX5P45973 191 aa2.78□□□□□ -1.96
CD44-219ENST00000525685 RPL29P47914 159 aaKnown RBP2.78□□□□□ -1.96
CD44-219ENST00000525685 XKP51811 444 aa2.78□□□□□ -1.96
CD44-219ENST00000525685 MLF1P58340 268 aa2.78□□□□□ -1.96
CD44-219ENST00000525685 RND3P61587 244 aa2.78□□□□□ -1.96
CD44-219ENST00000525685 VBP1P61758 197 aa2.78□□□□□ -1.96
CD44-219ENST00000525685 RPL8P62917 257 aaKnown RBP2.78□□□□□ -1.96
CD44-219ENST00000525685 ARG2P78540 354 aa2.78□□□□□ -1.96
CD44-219ENST00000525685 EMX2Q04743 252 aa2.78□□□□□ -1.96
CD44-219ENST00000525685 C2orf80Q0P641 193 aa2.78□□□□□ -1.96
CD44-219ENST00000525685 PDZK1IP1Q13113 114 aa2.78□□□□□ -1.96
CD44-219ENST00000525685 EBPQ15125 230 aaKnown RBP2.78□□□□□ -1.96
CD44-219ENST00000525685 BCL2A1Q16548 175 aa2.78□□□□□ -1.96
CD44-219ENST00000525685 MOGQ16653 247 aa2.78□□□□□ -1.96
CD44-219ENST00000525685 ATP6AP1LQ52LC2 224 aa2.78□□□□□ -1.96
CD44-219ENST00000525685 H3F3CQ6NXT2 135 aa2.78□□□□□ -1.96
CD44-219ENST00000525685 NIPAL3Q6P499 406 aa2.78□□□□□ -1.96
CD44-219ENST00000525685 TMEM107Q6UX40 140 aa2.78□□□□□ -1.96
CD44-219ENST00000525685 HSDL2Q6YN16 418 aa2.78□□□□□ -1.96
CD44-219ENST00000525685 DNM1P46Q6ZS02 220 aa2.78□□□□□ -1.96
CD44-219ENST00000525685 TRPM8Q7Z2W7 1104 aa2.78□□□□□ -1.96
CD44-219ENST00000525685 LHFPL4Q7Z7J7 247 aa2.78□□□□□ -1.96
CD44-219ENST00000525685 RPS19BP1Q86WX3 136 aaKnown RBP2.78□□□□□ -1.96
CD44-219ENST00000525685 ZNF100Q8IYN0 542 aa2.78□□□□□ -1.96
CD44-219ENST00000525685 LRRC34Q8IZ02 419 aa2.78□□□□□ -1.96
CD44-219ENST00000525685 LIX1Q8N485 282 aa2.78□□□□□ -1.96
CD44-219ENST00000525685 ZADH2Q8N4Q0 377 aa2.78□□□□□ -1.96
CD44-219ENST00000525685 C14orf178Q8N769 122 aaPredicted RBP2.78□□□□□ -1.96
CD44-219ENST00000525685 FNDC5Q8NAU1 212 aa2.78□□□□□ -1.96
CD44-219ENST00000525685 MDS2Q8NDY4 140 aa2.78□□□□□ -1.96
CD44-219ENST00000525685 CATSPER1Q8NEC5 780 aa2.78□□□□□ -1.96
CD44-219ENST00000525685 OR7G2Q8NG99 324 aa2.78□□□□□ -1.96
CD44-219ENST00000525685 OR10H4Q8NGA5 316 aa2.78□□□□□ -1.96
CD44-219ENST00000525685 OR4K14Q8NGD5 310 aa2.78□□□□□ -1.96
CD44-219ENST00000525685 OR52R1Q8NGF1 315 aa2.78□□□□□ -1.96
CD44-219ENST00000525685 NUBPLQ8TB37 319 aa2.78□□□□□ -1.96
CD44-219ENST00000525685 ZNF675Q8TD23 568 aa2.78□□□□□ -1.96
CD44-219ENST00000525685 DYDC1Q8WWB3 177 aa2.78□□□□□ -1.96
CD44-219ENST00000525685 CIDECQ96AQ7 238 aaPredicted RBP2.78□□□□□ -1.96
CD44-219ENST00000525685 PPCDCQ96CD2 204 aa2.78□□□□□ -1.96
CD44-219ENST00000525685 C7orf34Q96L11 122 aa2.78□□□□□ -1.96
CD44-219ENST00000525685 SECISBP2Q96T21 854 aaKnown RBP2.78□□□□□ -1.96
CD44-219ENST00000525685 TXN2Q99757 166 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms