RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 ATP4BP51164 291 aa2.33□□□□□ -2.04
CSDE1-209ENST00000525132 PRKXP51817 358 aa2.33□□□□□ -2.04
CSDE1-209ENST00000525132 CCNHP51946 323 aaPredicted RBP2.33□□□□□ -2.04
CSDE1-209ENST00000525132 HNRNPA3P51991 378 aaKnown RBP2.33□□□□□ -2.04
CSDE1-209ENST00000525132 KPNA2P52292 529 aaKnown RBP2.33□□□□□ -2.04
CSDE1-209ENST00000525132 RIDAP52758 137 aaKnown RBP2.33□□□□□ -2.04
CSDE1-209ENST00000525132 PSMD4P55036 377 aaKnown RBP2.33□□□□□ -2.04
CSDE1-209ENST00000525132 NDUFV3P56181 108 aaKnown RBP2.33□□□□□ -2.04
CSDE1-209ENST00000525132 MRPS22P82650 360 aaKnown RBP2.33□□□□□ -2.04
CSDE1-209ENST00000525132 CYCSP99999 105 aaKnown RBP2.33□□□□□ -2.04
CSDE1-209ENST00000525132 FKBP3Q00688 224 aaKnown RBP2.33□□□□□ -2.04
CSDE1-209ENST00000525132 GRB7Q14451 532 aa2.33□□□□□ -2.04
CSDE1-209ENST00000525132 GNMTQ14749 295 aa2.33□□□□□ -2.04
CSDE1-209ENST00000525132 ZNF146Q15072 292 aa2.33□□□□□ -2.04
CSDE1-209ENST00000525132 CYTH1Q15438 398 aa2.33□□□□□ -2.04
CSDE1-209ENST00000525132 CARD16Q5EG05 197 aa2.33□□□□□ -2.04
CSDE1-209ENST00000525132 STUMQ69YW2 141 aa2.33□□□□□ -2.04
CSDE1-209ENST00000525132 TTC23LQ6PF05 361 aa2.33□□□□□ -2.04
CSDE1-209ENST00000525132 ZNF620Q6ZNG0 422 aa2.33□□□□□ -2.04
CSDE1-209ENST00000525132 PGAP1Q75T13 922 aa2.33□□□□□ -2.04
CSDE1-209ENST00000525132 HDDC2Q7Z4H3 204 aa2.33□□□□□ -2.04
CSDE1-209ENST00000525132 CRLF3Q8IUI8 442 aa2.33□□□□□ -2.04
CSDE1-209ENST00000525132 DCUN1D3Q8IWE4 304 aa2.33□□□□□ -2.04
CSDE1-209ENST00000525132 ZNF100Q8IYN0 542 aa2.33□□□□□ -2.04
CSDE1-209ENST00000525132 METTL4Q8N3J2 472 aa2.33□□□□□ -2.04
CSDE1-209ENST00000525132 CSNK1A1LQ8N752 337 aa2.33□□□□□ -2.04
CSDE1-209ENST00000525132 FAM86B1Q8N7N1 296 aa2.33□□□□□ -2.04
CSDE1-209ENST00000525132 C8orf31Q8N9H6 132 aa2.33□□□□□ -2.04
CSDE1-209ENST00000525132 OR4A15Q8NGL6 344 aa2.33□□□□□ -2.04
CSDE1-209ENST00000525132 OR13C9Q8NGT0 318 aa2.33□□□□□ -2.04
CSDE1-209ENST00000525132 C11orf45Q8TAV5 145 aa2.33□□□□□ -2.04
CSDE1-209ENST00000525132 ZNF519Q8TB69 540 aa2.33□□□□□ -2.04
CSDE1-209ENST00000525132 PIH1D2Q8WWB5 315 aa2.33□□□□□ -2.04
CSDE1-209ENST00000525132 CRYGNQ8WXF5 182 aa2.33□□□□□ -2.04
CSDE1-209ENST00000525132 CREB3L1Q96BA8 519 aa2.33□□□□□ -2.04
CSDE1-209ENST00000525132 TMEM80Q96HE8 168 aa2.33□□□□□ -2.04
CSDE1-209ENST00000525132 GMPPAQ96IJ6 420 aaPredicted RBP2.33□□□□□ -2.04
CSDE1-209ENST00000525132 C9orf85Q96MD7 179 aa2.33□□□□□ -2.04
CSDE1-209ENST00000525132 JSRP1Q96MG2 331 aaPredicted RBP2.33□□□□□ -2.04
CSDE1-209ENST00000525132 OPALINQ96PE5 141 aa2.33□□□□□ -2.04
CSDE1-209ENST00000525132 CSPG4P5Q96PW8 444 aa2.33□□□□□ -2.04
CSDE1-209ENST00000525132 SYT15Q9BQS2 421 aa2.33□□□□□ -2.04
CSDE1-209ENST00000525132 TM6SF2Q9BZW4 377 aa2.33□□□□□ -2.04
CSDE1-209ENST00000525132 MFFQ9GZY8 342 aa2.33□□□□□ -2.04
CSDE1-209ENST00000525132 BOLA2Q9H3K6 86 aa2.33□□□□□ -2.04
CSDE1-209ENST00000525132 RBKSQ9H477 322 aa2.33□□□□□ -2.04
CSDE1-209ENST00000525132 RANBP3Q9H6Z4 567 aaPredicted RBP2.33□□□□□ -2.04
CSDE1-209ENST00000525132 ABCC13Q9NSE7 274 aa2.33□□□□□ -2.04
CSDE1-209ENST00000525132 CBLN4Q9NTU7 201 aa2.33□□□□□ -2.04
CSDE1-209ENST00000525132 QPCTLQ9NXS2 382 aa2.33□□□□□ -2.04
CSDE1-209ENST00000525132 UBAP1Q9NZ09 502 aa2.33□□□□□ -2.04
CSDE1-209ENST00000525132 MYEF2Q9P2K5 600 aaKnown RBP2.33□□□□□ -2.04
CSDE1-209ENST00000525132 WARS2Q9UGM6 360 aaKnown RBP2.33□□□□□ -2.04
CSDE1-209ENST00000525132 DDX19BQ9UMR2 479 aa2.33□□□□□ -2.04
CSDE1-209ENST00000525132 SAMD4AQ9UPU9 718 aaKnown RBP2.33□□□□□ -2.04
CSDE1-209ENST00000525132 GAB2Q9UQC2 676 aa2.33□□□□□ -2.04
CSDE1-209ENST00000525132 AUP1Q9Y679 476 aa2.33□□□□□ -2.04
CSDE1-209ENST00000525132 V9GYY5 206 aaPredicted RBP2.33□□□□□ -2.04
CSDE1-209ENST00000525132 TCHHQ07283 1943 aa2.32□□□□□ -2.04
CSDE1-209ENST00000525132 IGHV1-45A0A0A0MS14 117 aa2.32□□□□□ -2.04
CSDE1-209ENST00000525132 A0A0G2JMP0 313 aa2.32□□□□□ -2.04
CSDE1-209ENST00000525132 A0A0X1KG70 313 aa2.32□□□□□ -2.04
CSDE1-209ENST00000525132 GOLGA8IPA6NC78 632 aa2.32□□□□□ -2.04
CSDE1-209ENST00000525132 PINLYPA6NC86 204 aa2.32□□□□□ -2.04
CSDE1-209ENST00000525132 FAM172BPA6NC97 362 aa2.32□□□□□ -2.04
CSDE1-209ENST00000525132 PMS2P5A8MQ11 134 aa2.32□□□□□ -2.04
CSDE1-209ENST00000525132 PDZK1P1A8MUH7 402 aa2.32□□□□□ -2.04
CSDE1-209ENST00000525132 GOLGA8MH3BSY2 632 aa2.32□□□□□ -2.04
CSDE1-209ENST00000525132 NDUFAB1O14561 156 aa2.32□□□□□ -2.04
CSDE1-209ENST00000525132 PPP1R2P9O14990 202 aa2.32□□□□□ -2.04
CSDE1-209ENST00000525132 SIVA1O15304 175 aa2.32□□□□□ -2.04
CSDE1-209ENST00000525132 CHST1O43916 411 aa2.32□□□□□ -2.04
CSDE1-209ENST00000525132 FCN3O75636 299 aa2.32□□□□□ -2.04
CSDE1-209ENST00000525132 ALDOBP05062 364 aa2.32□□□□□ -2.04
CSDE1-209ENST00000525132 IL12AP29459 219 aa2.32□□□□□ -2.04
CSDE1-209ENST00000525132 LEPP41159 167 aa2.32□□□□□ -2.04
CSDE1-209ENST00000525132 SLC1A1P43005 524 aa2.32□□□□□ -2.04
CSDE1-209ENST00000525132 GSSP48637 474 aa2.32□□□□□ -2.04
CSDE1-209ENST00000525132 DIO3P55073 304 aa2.32□□□□□ -2.04
CSDE1-209ENST00000525132 MAP3K7CLP57077 242 aa2.32□□□□□ -2.04
CSDE1-209ENST00000525132 ERVK-25P63136 954 aa2.32□□□□□ -2.04
CSDE1-209ENST00000525132 TPM4P67936 248 aa2.32□□□□□ -2.04
CSDE1-209ENST00000525132 SRPXP78539 464 aa2.32□□□□□ -2.04
CSDE1-209ENST00000525132 LCN2P80188 198 aa2.32□□□□□ -2.04
CSDE1-209ENST00000525132 MRPS11P82912 194 aaKnown RBP2.32□□□□□ -2.04
CSDE1-209ENST00000525132 COTL1Q14019 142 aa2.32□□□□□ -2.04
CSDE1-209ENST00000525132 SLC10A1Q14973 349 aa2.32□□□□□ -2.04
CSDE1-209ENST00000525132 DGUOKQ16854 277 aa2.32□□□□□ -2.04
CSDE1-209ENST00000525132 CNPY1Q3B7I2 92 aa2.32□□□□□ -2.04
CSDE1-209ENST00000525132 SLC22A6Q4U2R8 563 aa2.32□□□□□ -2.04
CSDE1-209ENST00000525132 KLF17Q5JT82 389 aaPredicted RBP2.32□□□□□ -2.04
CSDE1-209ENST00000525132 RNLSQ5VYX0 342 aa2.32□□□□□ -2.04
CSDE1-209ENST00000525132 UNQ9370/PRO34162Q6UXP9 181 aa2.32□□□□□ -2.04
CSDE1-209ENST00000525132 Q6ZSR3 168 aa2.32□□□□□ -2.04
CSDE1-209ENST00000525132 SLC25A48Q6ZT89 311 aaKnown RBP2.32□□□□□ -2.04
CSDE1-209ENST00000525132 SNX20Q7Z614 316 aa2.32□□□□□ -2.04
CSDE1-209ENST00000525132 ZNF329Q86UD4 541 aa2.32□□□□□ -2.04
CSDE1-209ENST00000525132 CMTM1Q8IZ96 169 aa2.32□□□□□ -2.04
CSDE1-209ENST00000525132 ST13P4Q8IZP2 240 aaPredicted RBP2.32□□□□□ -2.04
CSDE1-209ENST00000525132 MS4A15Q8N5U1 240 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms