RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 CDK16Q00536 496 aa5.29□□□□□ -1.56
NEDD8-203ENST00000524927 TRAP1Q12931 704 aaKnown RBP5.29□□□□□ -1.56
NEDD8-203ENST00000524927 ZNF181Q2M3W8 571 aa5.29□□□□□ -1.56
NEDD8-203ENST00000524927 FAM76BQ5HYJ3 339 aa5.29□□□□□ -1.56
NEDD8-203ENST00000524927 THEM4Q5T1C6 240 aa5.29□□□□□ -1.56
NEDD8-203ENST00000524927 ZER1Q7Z7L7 766 aa5.29□□□□□ -1.56
NEDD8-203ENST00000524927 CDRT4Q8N9R6 151 aa5.29□□□□□ -1.56
NEDD8-203ENST00000524927 OR13C3Q8NGS6 347 aa5.29□□□□□ -1.56
NEDD8-203ENST00000524927 KLF14Q8TD94 323 aaPredicted RBP5.29□□□□□ -1.56
NEDD8-203ENST00000524927 UBTD2Q8WUN7 234 aa5.29□□□□□ -1.56
NEDD8-203ENST00000524927 UBLCP1Q8WVY7 318 aaPredicted RBP5.29□□□□□ -1.56
NEDD8-203ENST00000524927 MAIP1Q8WWC4 291 aa5.29□□□□□ -1.56
NEDD8-203ENST00000524927 FCAMRQ8WWV6 532 aa5.29□□□□□ -1.56
NEDD8-203ENST00000524927 DDIT4LQ96D03 193 aa5.29□□□□□ -1.56
NEDD8-203ENST00000524927 EBPLQ9BY08 206 aa5.29□□□□□ -1.56
NEDD8-203ENST00000524927 CTPS2Q9NRF8 586 aa5.29□□□□□ -1.56
NEDD8-203ENST00000524927 ADPRHL2Q9NX46 363 aa5.29□□□□□ -1.56
NEDD8-203ENST00000524927 PITPNC1Q9UKF7 332 aa5.29□□□□□ -1.56
NEDD8-203ENST00000524927 ACOT9Q9Y305 439 aa5.29□□□□□ -1.56
NEDD8-203ENST00000524927 DNAH5Q8TE73 4624 aa5.28□□□□□ -1.56
NEDD8-203ENST00000524927 VGLL3A8MV65 326 aa5.28□□□□□ -1.56
NEDD8-203ENST00000524927 K7EPI3 171 aa5.28□□□□□ -1.56
NEDD8-203ENST00000524927 BMPR1BO00238 502 aa5.28□□□□□ -1.56
NEDD8-203ENST00000524927 ZNF208O43345 1280 aa5.28□□□□□ -1.56
NEDD8-203ENST00000524927 OR10H3O60404 316 aa5.28□□□□□ -1.56
NEDD8-203ENST00000524927 FMO6PO60774 539 aa5.28□□□□□ -1.56
NEDD8-203ENST00000524927 AKR7A3O95154 331 aa5.28□□□□□ -1.56
NEDD8-203ENST00000524927 CYB5R3P00387 301 aaPredicted RBP5.28□□□□□ -1.56
NEDD8-203ENST00000524927 GPIP06744 558 aa5.28□□□□□ -1.56
NEDD8-203ENST00000524927 PRPS2P11908 318 aa5.28□□□□□ -1.56
NEDD8-203ENST00000524927 CCL2P13500 99 aa5.28□□□□□ -1.56
NEDD8-203ENST00000524927 NKX2-1P43699 371 aaPredicted RBP5.28□□□□□ -1.56
NEDD8-203ENST00000524927 CDX1P47902 265 aaPredicted RBP5.28□□□□□ -1.56
NEDD8-203ENST00000524927 HADHBP55084 474 aaKnown RBP5.28□□□□□ -1.56
NEDD8-203ENST00000524927 TBC1D28Q2M2D7 210 aa5.28□□□□□ -1.56
NEDD8-203ENST00000524927 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.28□□□□□ -1.56
NEDD8-203ENST00000524927 NCR3LG1Q68D85 454 aa5.28□□□□□ -1.56
NEDD8-203ENST00000524927 GRINAQ7Z429 371 aa5.28□□□□□ -1.56
NEDD8-203ENST00000524927 TRPT1Q86TN4 253 aaKnown RBP5.28□□□□□ -1.56
NEDD8-203ENST00000524927 ZNF429Q86V71 674 aa5.28□□□□□ -1.56
NEDD8-203ENST00000524927 CROCCP3Q8IVE0 287 aa5.28□□□□□ -1.56
NEDD8-203ENST00000524927 SGPP2Q8IWX5 399 aa5.28□□□□□ -1.56
NEDD8-203ENST00000524927 PNKDQ8N490 385 aa5.28□□□□□ -1.56
NEDD8-203ENST00000524927 FAM71E2Q8N5Q1 922 aa5.28□□□□□ -1.56
NEDD8-203ENST00000524927 C10orf53Q8N6V4 93 aa5.28□□□□□ -1.56
NEDD8-203ENST00000524927 KLHL30-AS1Q8NEE0 82 aa5.28□□□□□ -1.56
NEDD8-203ENST00000524927 OR2Z1Q8NG97 314 aa5.28□□□□□ -1.56
NEDD8-203ENST00000524927 C17orf50Q8WW18 174 aa5.28□□□□□ -1.56
NEDD8-203ENST00000524927 TNFRSF14Q92956 283 aa5.28□□□□□ -1.56
NEDD8-203ENST00000524927 NAT10Q9H0A0 1025 aaKnown RBP5.28□□□□□ -1.56
NEDD8-203ENST00000524927 RIMS4Q9H426 269 aaPredicted RBP5.28□□□□□ -1.56
NEDD8-203ENST00000524927 RAB9BQ9NP90 201 aa5.28□□□□□ -1.56
NEDD8-203ENST00000524927 OPTCQ9UBM4 332 aa5.28□□□□□ -1.56
NEDD8-203ENST00000524927 CTSZQ9UBR2 303 aa5.28□□□□□ -1.56
NEDD8-203ENST00000524927 TNCP24821 2201 aa5.27□□□□□ -1.57
NEDD8-203ENST00000524927 A6NDX4 124 aa5.27□□□□□ -1.57
NEDD8-203ENST00000524927 SLC22A2O15244 555 aa5.27□□□□□ -1.57
NEDD8-203ENST00000524927 CRCPO75575 148 aa5.27□□□□□ -1.57
NEDD8-203ENST00000524927 PTHP01270 115 aa5.27□□□□□ -1.57
NEDD8-203ENST00000524927 APOHP02749 345 aaPredicted RBP5.27□□□□□ -1.57
NEDD8-203ENST00000524927 PTMAP06454 111 aaKnown RBP5.27□□□□□ -1.57
NEDD8-203ENST00000524927 B4GALT1P15291 398 aa5.27□□□□□ -1.57
NEDD8-203ENST00000524927 SPNP16150 400 aa5.27□□□□□ -1.57
NEDD8-203ENST00000524927 ATP6V1C1P21283 382 aa5.27□□□□□ -1.57
NEDD8-203ENST00000524927 NTSP30990 170 aa5.27□□□□□ -1.57
NEDD8-203ENST00000524927 NPBWR1P48145 328 aa5.27□□□□□ -1.57
NEDD8-203ENST00000524927 P2RY4P51582 365 aa5.27□□□□□ -1.57
NEDD8-203ENST00000524927 CCNG1P51959 295 aa5.27□□□□□ -1.57
NEDD8-203ENST00000524927 NCBP2P52298 156 aaKnown RBP eCLIP5.27□□□□□ -1.57
NEDD8-203ENST00000524927 KLRD1Q13241 179 aa5.27□□□□□ -1.57
NEDD8-203ENST00000524927 SKP2Q13309 424 aa5.27□□□□□ -1.57
NEDD8-203ENST00000524927 KCNJ8Q15842 424 aa5.27□□□□□ -1.57
NEDD8-203ENST00000524927 C10orf99Q6UWK7 81 aa5.27□□□□□ -1.57
NEDD8-203ENST00000524927 BTNL8Q6UX41 500 aa5.27□□□□□ -1.57
NEDD8-203ENST00000524927 C18orf65Q6ZTR6 163 aa5.27□□□□□ -1.57
NEDD8-203ENST00000524927 BTN2A1Q7KYR7 527 aa5.27□□□□□ -1.57
NEDD8-203ENST00000524927 EGFL6Q8IUX8 553 aa5.27□□□□□ -1.57
NEDD8-203ENST00000524927 ZNF695Q8IW36 515 aa5.27□□□□□ -1.57
NEDD8-203ENST00000524927 COX18Q8N8Q8 333 aa5.27□□□□□ -1.57
NEDD8-203ENST00000524927 DUX3Q96PT4 197 aa5.27□□□□□ -1.57
NEDD8-203ENST00000524927 OR2V2Q96R30 315 aa5.27□□□□□ -1.57
NEDD8-203ENST00000524927 ELOVL6Q9H5J4 265 aa5.27□□□□□ -1.57
NEDD8-203ENST00000524927 RETNQ9HD89 108 aa5.27□□□□□ -1.57
NEDD8-203ENST00000524927 MAN2C1Q9NTJ4 1040 aa5.27□□□□□ -1.57
NEDD8-203ENST00000524927 CD274Q9NZQ7 290 aa5.27□□□□□ -1.57
NEDD8-203ENST00000524927 ONECUT1Q9UBC0 465 aa5.27□□□□□ -1.57
NEDD8-203ENST00000524927 SMIM1B2RUZ4 78 aa5.26□□□□□ -1.57
NEDD8-203ENST00000524927 F8VVB4 439 aa5.26□□□□□ -1.57
NEDD8-203ENST00000524927 F8VWA3 439 aa5.26□□□□□ -1.57
NEDD8-203ENST00000524927 NPIPB9F8W1W9 429 aa5.26□□□□□ -1.57
NEDD8-203ENST00000524927 MANBAO00462 879 aa5.26□□□□□ -1.57
NEDD8-203ENST00000524927 CTDSPLO15194 276 aa5.26□□□□□ -1.57
NEDD8-203ENST00000524927 ETS2P15036 469 aa5.26□□□□□ -1.57
NEDD8-203ENST00000524927 ATP6V1B1P15313 513 aa5.26□□□□□ -1.57
NEDD8-203ENST00000524927 PMELP40967 661 aa5.26□□□□□ -1.57
NEDD8-203ENST00000524927 ATP12AP54707 1039 aa5.26□□□□□ -1.57
NEDD8-203ENST00000524927 CLDN17P56750 224 aa5.26□□□□□ -1.57
NEDD8-203ENST00000524927 KCNJ10P78508 379 aa5.26□□□□□ -1.57
NEDD8-203ENST00000524927 BASP1P80723 227 aaKnown RBP5.26□□□□□ -1.57
NEDD8-203ENST00000524927 DUSP5Q16690 384 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms