RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 FAM71E2Q8N5Q1 922 aa3.98□□□□□ -1.77
SKP1-213ENST00000524288 OR4C5Q8NGB2 326 aa3.98□□□□□ -1.77
SKP1-213ENST00000524288 OR2G3Q8NGZ4 309 aa3.98□□□□□ -1.77
SKP1-213ENST00000524288 BORCS5Q969J3 196 aa3.98□□□□□ -1.77
SKP1-213ENST00000524288 IL22RA2Q969J5 263 aa3.98□□□□□ -1.77
SKP1-213ENST00000524288 ISOC1Q96CN7 298 aa3.98□□□□□ -1.77
SKP1-213ENST00000524288 RCN3Q96D15 328 aa3.98□□□□□ -1.77
SKP1-213ENST00000524288 ECHDC3Q96DC8 303 aa3.98□□□□□ -1.77
SKP1-213ENST00000524288 RMND5BQ96G75 393 aaPredicted RBP3.98□□□□□ -1.77
SKP1-213ENST00000524288 CSPG4P5Q96PW8 444 aa3.98□□□□□ -1.77
SKP1-213ENST00000524288 OR2M2Q96R28 347 aa3.98□□□□□ -1.77
SKP1-213ENST00000524288 ASB7Q9H672 318 aa3.98□□□□□ -1.77
SKP1-213ENST00000524288 EFCAB1Q9HAE3 211 aa3.98□□□□□ -1.77
SKP1-213ENST00000524288 RETNQ9HD89 108 aa3.98□□□□□ -1.77
SKP1-213ENST00000524288 CCNB1IP1Q9NPC3 277 aa3.98□□□□□ -1.77
SKP1-213ENST00000524288 NRBP2Q9NSY0 501 aa3.98□□□□□ -1.77
SKP1-213ENST00000524288 SLC25A37Q9NYZ2 338 aa3.98□□□□□ -1.77
SKP1-213ENST00000524288 HMGXB4Q9UGU5 601 aa3.98□□□□□ -1.77
SKP1-213ENST00000524288 NUP205Q92621 2012 aa3.97□□□□□ -1.77
SKP1-213ENST00000524288 GLYATL1P3A0A0U1RQE8 302 aa3.97□□□□□ -1.77
SKP1-213ENST00000524288 TRPC5OSA6NMA1 111 aa3.97□□□□□ -1.77
SKP1-213ENST00000524288 BBIP1A8MTZ0 92 aa3.97□□□□□ -1.77
SKP1-213ENST00000524288 KLLNB2CW77 178 aa3.97□□□□□ -1.77
SKP1-213ENST00000524288 SUPT3HB4E1H0 165 aa3.97□□□□□ -1.77
SKP1-213ENST00000524288 H3BSA7 217 aa3.97□□□□□ -1.77
SKP1-213ENST00000524288 MFSD11O43934 449 aa3.97□□□□□ -1.77
SKP1-213ENST00000524288 SERPINB7O75635 380 aa3.97□□□□□ -1.77
SKP1-213ENST00000524288 ZMPSTE24O75844 475 aa3.97□□□□□ -1.77
SKP1-213ENST00000524288 AIFM1O95831 613 aa3.97□□□□□ -1.77
SKP1-213ENST00000524288 SLC25A27O95847 323 aa3.97□□□□□ -1.77
SKP1-213ENST00000524288 IGHV4-34P06331 123 aa3.97□□□□□ -1.77
SKP1-213ENST00000524288 RCC1P18754 421 aaPredicted RBP3.97□□□□□ -1.77
SKP1-213ENST00000524288 BCKDHBP21953 392 aa3.97□□□□□ -1.77
SKP1-213ENST00000524288 HMOX2P30519 316 aa3.97□□□□□ -1.77
SKP1-213ENST00000524288 AQP2P41181 271 aa3.97□□□□□ -1.77
SKP1-213ENST00000524288 HCAR3P49019 387 aa3.97□□□□□ -1.77
SKP1-213ENST00000524288 SSR4P51571 173 aa3.97□□□□□ -1.77
SKP1-213ENST00000524288 PSME3P61289 254 aa3.97□□□□□ -1.77
SKP1-213ENST00000524288 TFAMQ00059 246 aaKnown RBP3.97□□□□□ -1.77
SKP1-213ENST00000524288 ZNF33AQ06730 810 aa3.97□□□□□ -1.77
SKP1-213ENST00000524288 LAMTOR4Q0VGL1 99 aa3.97□□□□□ -1.77
SKP1-213ENST00000524288 STX5Q13190 355 aa3.97□□□□□ -1.77
SKP1-213ENST00000524288 BCL2A1Q16548 175 aa3.97□□□□□ -1.77
SKP1-213ENST00000524288 GOLGA7BQ2TAP0 167 aa3.97□□□□□ -1.77
SKP1-213ENST00000524288 COQ5Q5HYK3 327 aa3.97□□□□□ -1.77
SKP1-213ENST00000524288 C6orf52Q5T4I8 152 aa3.97□□□□□ -1.77
SKP1-213ENST00000524288 TWF2Q6IBS0 349 aaKnown RBP3.97□□□□□ -1.77
SKP1-213ENST00000524288 FRMPD2BQ6IN97 320 aa3.97□□□□□ -1.77
SKP1-213ENST00000524288 LCN8Q6JVE9 175 aa3.97□□□□□ -1.77
SKP1-213ENST00000524288 PRMT9Q6P2P2 845 aa3.97□□□□□ -1.77
SKP1-213ENST00000524288 ZNF621Q6ZSS3 439 aa3.97□□□□□ -1.77
SKP1-213ENST00000524288 UNC93AQ86WB7 457 aa3.97□□□□□ -1.77
SKP1-213ENST00000524288 MMAAQ8IVH4 418 aaKnown RBP3.97□□□□□ -1.77
SKP1-213ENST00000524288 GABRG1Q8N1C3 465 aa3.97□□□□□ -1.77
SKP1-213ENST00000524288 ZFP41Q8N8Y5 198 aa3.97□□□□□ -1.77
SKP1-213ENST00000524288 SLC35B4Q969S0 331 aa3.97□□□□□ -1.77
SKP1-213ENST00000524288 ROPN1LQ96C74 230 aa3.97□□□□□ -1.77
SKP1-213ENST00000524288 CNBD2Q96M20 576 aa3.97□□□□□ -1.77
SKP1-213ENST00000524288 BCL7BQ9BQE9 202 aa3.97□□□□□ -1.77
SKP1-213ENST00000524288 HDHD3Q9BSH5 251 aaPredicted RBP3.97□□□□□ -1.77
SKP1-213ENST00000524288 OSBPL10Q9BXB5 764 aa3.97□□□□□ -1.77
SKP1-213ENST00000524288 DNTTIP1Q9H147 329 aa3.97□□□□□ -1.77
SKP1-213ENST00000524288 NCOR1P1Q9H4R4 102 aa3.97□□□□□ -1.77
SKP1-213ENST00000524288 CRLF2Q9HC73 371 aa3.97□□□□□ -1.77
SKP1-213ENST00000524288 GPATCH2LQ9NWQ4 482 aa3.97□□□□□ -1.77
SKP1-213ENST00000524288 RHBDL2Q9NX52 303 aa3.97□□□□□ -1.77
SKP1-213ENST00000524288 UXTQ9UBK9 157 aaPredicted RBP3.97□□□□□ -1.77
SKP1-213ENST00000524288 TBC1D24Q9ULP9 559 aa3.97□□□□□ -1.77
SKP1-213ENST00000524288 GOLT1BQ9Y3E0 138 aa3.97□□□□□ -1.77
SKP1-213ENST00000524288 AP4S1Q9Y587 144 aa3.97□□□□□ -1.77
SKP1-213ENST00000524288 F11RQ9Y624 299 aaKnown RBP3.97□□□□□ -1.77
SKP1-213ENST00000524288 TRPM7Q96QT4 1865 aa3.96□□□□□ -1.77
SKP1-213ENST00000524288 A6NDX4 124 aa3.96□□□□□ -1.78
SKP1-213ENST00000524288 PANO1I0J062 215 aa3.96□□□□□ -1.78
SKP1-213ENST00000524288 SIRPB1O00241 398 aa3.96□□□□□ -1.78
SKP1-213ENST00000524288 CHST1O43916 411 aa3.96□□□□□ -1.78
SKP1-213ENST00000524288 DPM1O60762 260 aa3.96□□□□□ -1.78
SKP1-213ENST00000524288 SULT1C4O75897 302 aa3.96□□□□□ -1.78
SKP1-213ENST00000524288 SRP72O76094 671 aaKnown RBP3.96□□□□□ -1.78
SKP1-213ENST00000524288 WISP3O95389 354 aaPredicted RBP3.96□□□□□ -1.78
SKP1-213ENST00000524288 UTS2O95399 124 aa3.96□□□□□ -1.78
SKP1-213ENST00000524288 KRTAP1-4P0C5Y4 121 aa3.96□□□□□ -1.78
SKP1-213ENST00000524288 SLC35E2BP0CK96 405 aa3.96□□□□□ -1.78
SKP1-213ENST00000524288 CXCL8P10145 99 aa3.96□□□□□ -1.78
SKP1-213ENST00000524288 MGMTP16455 207 aa3.96□□□□□ -1.78
SKP1-213ENST00000524288 AK4P27144 223 aaPredicted RBP3.96□□□□□ -1.78
SKP1-213ENST00000524288 OTX1P32242 354 aaPredicted RBP3.96□□□□□ -1.78
SKP1-213ENST00000524288 CD151P48509 253 aa3.96□□□□□ -1.78
SKP1-213ENST00000524288 CSNK1EP49674 416 aaKnown RBP3.96□□□□□ -1.78
SKP1-213ENST00000524288 ERFP50548 548 aa3.96□□□□□ -1.78
SKP1-213ENST00000524288 TMBIM6P55061 237 aa3.96□□□□□ -1.78
SKP1-213ENST00000524288 ATP6V0D1P61421 351 aa3.96□□□□□ -1.78
SKP1-213ENST00000524288 RELAQ04206 551 aa3.96□□□□□ -1.78
SKP1-213ENST00000524288 BNIP2Q12982 314 aa3.96□□□□□ -1.78
SKP1-213ENST00000524288 MOGQ16653 247 aa3.96□□□□□ -1.78
SKP1-213ENST00000524288 ZNF829Q3KNS6 432 aaPredicted RBP3.96□□□□□ -1.78
SKP1-213ENST00000524288 HSDL1Q3SXM5 330 aa3.96□□□□□ -1.78
SKP1-213ENST00000524288 NIPAL1Q6NVV3 410 aa3.96□□□□□ -1.78
SKP1-213ENST00000524288 NCCRP1Q6ZVX7 275 aaPredicted RBP3.96□□□□□ -1.78
SKP1-213ENST00000524288 COX15Q7KZN9 410 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms