RNA–Protein interactions for RNA: ENST00000523275.5

CTNNA1-237, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-237ENST00000523275 LYNP07948 512 aa9.69□□□□□ -0.86
CTNNA1-237ENST00000523275 DUX4L2P0CJ85 424 aa9.69□□□□□ -0.86
CTNNA1-237ENST00000523275 DUX4L3P0CJ86 424 aa9.69□□□□□ -0.86
CTNNA1-237ENST00000523275 DUX4L4P0CJ87 422 aa9.69□□□□□ -0.86
CTNNA1-237ENST00000523275 DUX4L5P0CJ88 424 aa9.69□□□□□ -0.86
CTNNA1-237ENST00000523275 DUX4L6P0CJ89 424 aa9.69□□□□□ -0.86
CTNNA1-237ENST00000523275 DUX4L7P0CJ90 424 aa9.69□□□□□ -0.86
CTNNA1-237ENST00000523275 IER3P46695 156 aa9.69□□□□□ -0.86
CTNNA1-237ENST00000523275 TGM4P49221 684 aa9.69□□□□□ -0.86
CTNNA1-237ENST00000523275 SRSF4Q08170 494 aaKnown RBP9.69□□□□□ -0.86
CTNNA1-237ENST00000523275 PRDX4Q13162 271 aa9.69□□□□□ -0.86
CTNNA1-237ENST00000523275 LRRC10Q5BKY1 277 aa9.69□□□□□ -0.86
CTNNA1-237ENST00000523275 OLFML2AQ68BL7 652 aa9.69□□□□□ -0.86
CTNNA1-237ENST00000523275 DUX4L9Q6RFH8 374 aaPredicted RBP9.69□□□□□ -0.86
CTNNA1-237ENST00000523275 VMO1Q7Z5L0 202 aa9.69□□□□□ -0.86
CTNNA1-237ENST00000523275 CPOQ8IVL8 374 aa9.69□□□□□ -0.86
CTNNA1-237ENST00000523275 PDZD9Q8IXQ8 264 aa9.69□□□□□ -0.86
CTNNA1-237ENST00000523275 ADGRG5Q8IZF4 528 aa9.69□□□□□ -0.86
CTNNA1-237ENST00000523275 CMTM4Q8IZR5 234 aa9.69□□□□□ -0.86
CTNNA1-237ENST00000523275 FAM216BQ8N7L0 139 aa9.69□□□□□ -0.86
CTNNA1-237ENST00000523275 OR5T2Q8NGG2 359 aa9.69□□□□□ -0.86
CTNNA1-237ENST00000523275 OR10Z1Q8NGY1 313 aa9.69□□□□□ -0.86
CTNNA1-237ENST00000523275 WFDC12Q8WWY7 111 aa9.69□□□□□ -0.86
CTNNA1-237ENST00000523275 OR5P3Q8WZ94 311 aa9.69□□□□□ -0.86
CTNNA1-237ENST00000523275 CCDC124Q96CT7 223 aaKnown RBP9.69□□□□□ -0.86
CTNNA1-237ENST00000523275 ABCB9Q9NP78 766 aa9.69□□□□□ -0.86
CTNNA1-237ENST00000523275 TAS2R1Q9NYW7 299 aa9.69□□□□□ -0.86
CTNNA1-237ENST00000523275 PDP1Q9P0J1 537 aaPredicted RBP9.69□□□□□ -0.86
CTNNA1-237ENST00000523275 ONECUT1Q9UBC0 465 aa9.69□□□□□ -0.86
CTNNA1-237ENST00000523275 DUX4Q9UBX2 424 aa9.69□□□□□ -0.86
CTNNA1-237ENST00000523275 FAM96BQ9Y3D0 163 aa9.69□□□□□ -0.86
CTNNA1-237ENST00000523275 TRRAPQ9Y4A5 3859 aa9.68□□□□□ -0.86
CTNNA1-237ENST00000523275 TMEM210A6NLX4 147 aa9.68□□□□□ -0.86
CTNNA1-237ENST00000523275 PRODHO43272 600 aa9.68□□□□□ -0.86
CTNNA1-237ENST00000523275 GPR137BO60478 399 aa9.68□□□□□ -0.86
CTNNA1-237ENST00000523275 IGHV4-59P01825 116 aa9.68□□□□□ -0.86
CTNNA1-237ENST00000523275 OSMP13725 252 aa9.68□□□□□ -0.86
CTNNA1-237ENST00000523275 HOXB6P17509 224 aaKnown RBP9.68□□□□□ -0.86
CTNNA1-237ENST00000523275 AMY2BP19961 511 aa9.68□□□□□ -0.86
CTNNA1-237ENST00000523275 ACKR3P25106 362 aa9.68□□□□□ -0.86
CTNNA1-237ENST00000523275 GMFBP60983 142 aa9.68□□□□□ -0.86
CTNNA1-237ENST00000523275 IKZF1Q13422 519 aa9.68□□□□□ -0.86
CTNNA1-237ENST00000523275 FAM76BQ5HYJ3 339 aa9.68□□□□□ -0.86
CTNNA1-237ENST00000523275 STUMQ69YW2 141 aa9.68□□□□□ -0.86
CTNNA1-237ENST00000523275 METAP1DQ6UB28 335 aaPredicted RBP9.68□□□□□ -0.86
CTNNA1-237ENST00000523275 KCTD8Q6ZWB6 473 aa9.68□□□□□ -0.86
CTNNA1-237ENST00000523275 TMEM179BQ7Z7N9 219 aa9.68□□□□□ -0.86
CTNNA1-237ENST00000523275 LDLRAD3Q86YD5 345 aa9.68□□□□□ -0.86
CTNNA1-237ENST00000523275 CCDC197Q8NCU1 140 aa9.68□□□□□ -0.86
CTNNA1-237ENST00000523275 NPRL2Q8WTW4 380 aa9.68□□□□□ -0.86
CTNNA1-237ENST00000523275 CANT1Q8WVQ1 401 aa9.68□□□□□ -0.86
CTNNA1-237ENST00000523275 PIGCQ92535 297 aa9.68□□□□□ -0.86
CTNNA1-237ENST00000523275 RPL3LQ92901 407 aaKnown RBP9.68□□□□□ -0.86
CTNNA1-237ENST00000523275 MED30Q96HR3 178 aa9.68□□□□□ -0.86
CTNNA1-237ENST00000523275 RNF170Q96K19 258 aa9.68□□□□□ -0.86
CTNNA1-237ENST00000523275 CLPTM1LQ96KA5 538 aa9.68□□□□□ -0.86
CTNNA1-237ENST00000523275 RAB3IPQ96QF0 476 aaPredicted RBP9.68□□□□□ -0.86
CTNNA1-237ENST00000523275 HIST1H2AAQ96QV6 131 aa9.68□□□□□ -0.86
CTNNA1-237ENST00000523275 PKP2Q99959 881 aa9.68□□□□□ -0.86
CTNNA1-237ENST00000523275 DNTTIP1Q9H147 329 aa9.68□□□□□ -0.86
CTNNA1-237ENST00000523275 WDR13Q9H1Z4 485 aa9.68□□□□□ -0.86
CTNNA1-237ENST00000523275 C1orf21Q9H246 121 aa9.68□□□□□ -0.86
CTNNA1-237ENST00000523275 DPAGT1Q9H3H5 408 aa9.68□□□□□ -0.86
CTNNA1-237ENST00000523275 NIPAL2Q9H841 368 aa9.68□□□□□ -0.86
CTNNA1-237ENST00000523275 ZNF556Q9HAH1 456 aa9.68□□□□□ -0.86
CTNNA1-237ENST00000523275 DNAJB11Q9UBS4 358 aa9.68□□□□□ -0.86
CTNNA1-237ENST00000523275 ZNF391Q9UJN7 358 aa9.68□□□□□ -0.86
CTNNA1-237ENST00000523275 CAB39Q9Y376 341 aaPredicted RBP9.68□□□□□ -0.86
CTNNA1-237ENST00000523275 AQP12BA6NM10 295 aa9.67□□□□□ -0.86
CTNNA1-237ENST00000523275 E2F6O75461 281 aa9.67□□□□□ -0.86
CTNNA1-237ENST00000523275 FAM107AO95990 144 aa9.67□□□□□ -0.86
CTNNA1-237ENST00000523275 ALOX5APP20292 161 aa9.67□□□□□ -0.86
CTNNA1-237ENST00000523275 EEF1B2P24534 225 aaKnown RBP9.67□□□□□ -0.86
CTNNA1-237ENST00000523275 RPS7P62081 194 aaKnown RBP9.67□□□□□ -0.86
CTNNA1-237ENST00000523275 CDK5Q00535 292 aa9.67□□□□□ -0.86
CTNNA1-237ENST00000523275 GUCA2AQ02747 115 aa9.67□□□□□ -0.86
CTNNA1-237ENST00000523275 SLC35D3Q5M8T2 416 aa9.67□□□□□ -0.86
CTNNA1-237ENST00000523275 C1orf122Q6ZSJ8 110 aa9.67□□□□□ -0.86
CTNNA1-237ENST00000523275 AQP12AQ8IXF9 295 aa9.67□□□□□ -0.86
CTNNA1-237ENST00000523275 OR8B12Q8NGG6 310 aa9.67□□□□□ -0.86
CTNNA1-237ENST00000523275 C8orf46Q8TAG6 207 aa9.67□□□□□ -0.86
CTNNA1-237ENST00000523275 H1FXQ92522 213 aaKnown RBP9.67□□□□□ -0.86
CTNNA1-237ENST00000523275 LYZL4Q96KX0 146 aa9.67□□□□□ -0.86
CTNNA1-237ENST00000523275 CITED1Q99966 193 aa9.67□□□□□ -0.86
CTNNA1-237ENST00000523275 DCTN5Q9BTE1 182 aa9.67□□□□□ -0.86
CTNNA1-237ENST00000523275 THTPAQ9BU02 230 aa9.67□□□□□ -0.86
CTNNA1-237ENST00000523275 TEX12Q9BXU0 123 aa9.67□□□□□ -0.86
CTNNA1-237ENST00000523275 SIRT7Q9NRC8 400 aa9.67□□□□□ -0.86
CTNNA1-237ENST00000523275 SNTG1Q9NSN8 517 aa9.67□□□□□ -0.86
CTNNA1-237ENST00000523275 KLHDC2Q9Y2U9 406 aa9.67□□□□□ -0.86
CTNNA1-237ENST00000523275 RNF114Q9Y508 228 aa9.67□□□□□ -0.86
CTNNA1-237ENST00000523275 NKX6-3A6NJ46 265 aa9.66□□□□□ -0.86
CTNNA1-237ENST00000523275 ACOD1A6NK06 481 aa9.66□□□□□ -0.86
CTNNA1-237ENST00000523275 AKR7A2O43488 359 aa9.66□□□□□ -0.86
CTNNA1-237ENST00000523275 FBP1P09467 338 aa9.66□□□□□ -0.86
CTNNA1-237ENST00000523275 ANXA8P13928 327 aa9.66□□□□□ -0.86
CTNNA1-237ENST00000523275 PRKACGP22612 351 aa9.66□□□□□ -0.86
CTNNA1-237ENST00000523275 MAP2K3P46734 347 aa9.66□□□□□ -0.86
CTNNA1-237ENST00000523275 HCCSP53701 268 aa9.66□□□□□ -0.86
CTNNA1-237ENST00000523275 PSMA6P60900 246 aaKnown RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms