RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 TIFABQ6ZNK6 161 aa3.29□□□□□ -1.88
HMGB1P46-201ENST00000520062 SLC34A3Q8N130 599 aa3.29□□□□□ -1.88
HMGB1P46-201ENST00000520062 OR4M1Q8NGD0 313 aa3.29□□□□□ -1.88
HMGB1P46-201ENST00000520062 LILRB4Q8NHJ6 448 aa3.29□□□□□ -1.88
HMGB1P46-201ENST00000520062 DCAKDQ8WVC6 231 aa3.29□□□□□ -1.88
HMGB1P46-201ENST00000520062 CDS1Q92903 461 aa3.29□□□□□ -1.88
HMGB1P46-201ENST00000520062 ZNF285Q96NJ3 590 aa3.29□□□□□ -1.88
HMGB1P46-201ENST00000520062 OR4K3Q96R72 315 aa3.29□□□□□ -1.88
HMGB1P46-201ENST00000520062 WDR55Q9H6Y2 383 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P46-201ENST00000520062 C8orf17Q9NRJ1 99 aa3.29□□□□□ -1.88
HMGB1P46-201ENST00000520062 RBFOX1Q9NWB1 397 aaKnown RBP3.29□□□□□ -1.88
HMGB1P46-201ENST00000520062 RHBDL2Q9NX52 303 aa3.29□□□□□ -1.88
HMGB1P46-201ENST00000520062 NDRG2Q9UN36 371 aaKnown RBP3.29□□□□□ -1.88
HMGB1P46-201ENST00000520062 TFR2Q9UP52 801 aa3.29□□□□□ -1.88
HMGB1P46-201ENST00000520062 SLC7A11Q9UPY5 501 aa3.29□□□□□ -1.88
HMGB1P46-201ENST00000520062 YTHDF2Q9Y5A9 579 aaKnown RBP3.29□□□□□ -1.88
HMGB1P46-201ENST00000520062 TRAV8-7A0A075B6U6 113 aa3.28□□□□□ -1.88
HMGB1P46-201ENST00000520062 MANBAO00462 879 aa3.28□□□□□ -1.88
HMGB1P46-201ENST00000520062 PTTG1O95997 202 aa3.28□□□□□ -1.88
HMGB1P46-201ENST00000520062 CD74P04233 296 aa3.28□□□□□ -1.88
HMGB1P46-201ENST00000520062 MMP7P09237 267 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P46-201ENST00000520062 PRKACBP22694 351 aa3.28□□□□□ -1.88
HMGB1P46-201ENST00000520062 OPRK1P41145 380 aa3.28□□□□□ -1.88
HMGB1P46-201ENST00000520062 MTPNP58546 118 aa3.28□□□□□ -1.88
HMGB1P46-201ENST00000520062 PFN3P60673 137 aa3.28□□□□□ -1.88
HMGB1P46-201ENST00000520062 IFFO1Q0D2I5 559 aa3.28□□□□□ -1.88
HMGB1P46-201ENST00000520062 DYNC1I2Q13409 638 aaKnown RBP3.28□□□□□ -1.88
HMGB1P46-201ENST00000520062 C6orf99Q4VX62 202 aa3.28□□□□□ -1.88
HMGB1P46-201ENST00000520062 RNASE13Q5GAN3 156 aaKnown RBP3.28□□□□□ -1.88
HMGB1P46-201ENST00000520062 ZNF691Q5VV52 312 aa3.28□□□□□ -1.88
HMGB1P46-201ENST00000520062 AP1ARQ63HQ0 302 aa3.28□□□□□ -1.88
HMGB1P46-201ENST00000520062 SAXO2Q658L1 398 aa3.28□□□□□ -1.88
HMGB1P46-201ENST00000520062 FAM71E1Q6IPT2 247 aa3.28□□□□□ -1.88
HMGB1P46-201ENST00000520062 GUSBP11Q6P575 273 aa3.28□□□□□ -1.88
HMGB1P46-201ENST00000520062 FAHD1Q6P587 224 aa3.28□□□□□ -1.88
HMGB1P46-201ENST00000520062 PRRG3Q9BZD7 231 aa3.28□□□□□ -1.88
HMGB1P46-201ENST00000520062 PORCNQ9H237 461 aa3.28□□□□□ -1.88
HMGB1P46-201ENST00000520062 TMEM94Q12767 1356 aa3.27□□□□□ -1.89
HMGB1P46-201ENST00000520062 IGKV6D-21A0A0A0MT36 114 aa3.27□□□□□ -1.89
HMGB1P46-201ENST00000520062 TVP23AA6NH52 213 aa3.27□□□□□ -1.89
HMGB1P46-201ENST00000520062 OR5H1A6NKK0 313 aa3.27□□□□□ -1.89
HMGB1P46-201ENST00000520062 M0R1B8 84 aa3.27□□□□□ -1.89
HMGB1P46-201ENST00000520062 RRP8O43159 456 aaKnown RBP3.27□□□□□ -1.89
HMGB1P46-201ENST00000520062 SERPINB7O75635 380 aa3.27□□□□□ -1.89
HMGB1P46-201ENST00000520062 SC5DO75845 299 aa3.27□□□□□ -1.89
HMGB1P46-201ENST00000520062 LCN1P31025 176 aa3.27□□□□□ -1.89
HMGB1P46-201ENST00000520062 SPAM1P38567 509 aa3.27□□□□□ -1.89
HMGB1P46-201ENST00000520062 KIR3DL2P43630 455 aa3.27□□□□□ -1.89
HMGB1P46-201ENST00000520062 RGS6P49758 472 aa3.27□□□□□ -1.89
HMGB1P46-201ENST00000520062 C16orf72Q14CZ0 275 aa3.27□□□□□ -1.89
HMGB1P46-201ENST00000520062 MAD2L1BPQ15013 274 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P46-201ENST00000520062 TOMM34Q15785 309 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P46-201ENST00000520062 USF2Q15853 346 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P46-201ENST00000520062 CDNFQ49AH0 187 aa3.27□□□□□ -1.89
HMGB1P46-201ENST00000520062 ZNF684Q5T5D7 378 aa3.27□□□□□ -1.89
HMGB1P46-201ENST00000520062 KDM4DQ6B0I6 523 aa3.27□□□□□ -1.89
HMGB1P46-201ENST00000520062 EPGNQ6UW88 154 aa3.27□□□□□ -1.89
HMGB1P46-201ENST00000520062 Q6ZVH6 145 aa3.27□□□□□ -1.89
HMGB1P46-201ENST00000520062 COPS6Q7L5N1 327 aa3.27□□□□□ -1.89
HMGB1P46-201ENST00000520062 LGI3Q8N145 548 aa3.27□□□□□ -1.89
HMGB1P46-201ENST00000520062 TMEM256Q8N2U0 113 aa3.27□□□□□ -1.89
HMGB1P46-201ENST00000520062 TCAIMQ8N3R3 496 aa3.27□□□□□ -1.89
HMGB1P46-201ENST00000520062 DRAM1Q8N682 238 aa3.27□□□□□ -1.89
HMGB1P46-201ENST00000520062 OR2L8Q8NGY9 312 aa3.27□□□□□ -1.89
HMGB1P46-201ENST00000520062 OR1L1Q8NH94 360 aa3.27□□□□□ -1.89
HMGB1P46-201ENST00000520062 SFXN5Q8TD22 340 aa3.27□□□□□ -1.89
HMGB1P46-201ENST00000520062 C17orf50Q8WW18 174 aa3.27□□□□□ -1.89
HMGB1P46-201ENST00000520062 ING5Q8WYH8 240 aa3.27□□□□□ -1.89
HMGB1P46-201ENST00000520062 COA1Q9GZY4 146 aa3.27□□□□□ -1.89
HMGB1P46-201ENST00000520062 RMND1Q9NWS8 449 aa3.27□□□□□ -1.89
HMGB1P46-201ENST00000520062 CHMP5Q9NZZ3 219 aa3.27□□□□□ -1.89
HMGB1P46-201ENST00000520062 CFAP45Q9UL16 551 aa3.27□□□□□ -1.89
HMGB1P46-201ENST00000520062 AP3M1Q9Y2T2 418 aa3.27□□□□□ -1.89
HMGB1P46-201ENST00000520062 HSBP1L1C9JCN9 74 aa3.26□□□□□ -1.89
HMGB1P46-201ENST00000520062 K7EN84 100 aa3.26□□□□□ -1.89
HMGB1P46-201ENST00000520062 FOXH1O75593 365 aa3.26□□□□□ -1.89
HMGB1P46-201ENST00000520062 GATBO75879 557 aaKnown RBP3.26□□□□□ -1.89
HMGB1P46-201ENST00000520062 ADRA2AP08913 450 aa3.26□□□□□ -1.89
HMGB1P46-201ENST00000520062 ME2P23368 584 aa3.26□□□□□ -1.89
HMGB1P46-201ENST00000520062 P2RY2P41231 377 aa3.26□□□□□ -1.89
HMGB1P46-201ENST00000520062 GALR1P47211 349 aa3.26□□□□□ -1.89
HMGB1P46-201ENST00000520062 GPR176Q14439 515 aa3.26□□□□□ -1.89
HMGB1P46-201ENST00000520062 PTGES3Q15185 160 aaKnown RBP3.26□□□□□ -1.89
HMGB1P46-201ENST00000520062 TNXAQ16473 311 aa3.26□□□□□ -1.89
HMGB1P46-201ENST00000520062 SLC25A35Q3KQZ1 300 aa3.26□□□□□ -1.89
HMGB1P46-201ENST00000520062 YIF1BQ5BJH7 314 aa3.26□□□□□ -1.89
HMGB1P46-201ENST00000520062 Q6ZSR6 202 aa3.26□□□□□ -1.89
HMGB1P46-201ENST00000520062 SETD3Q86TU7 594 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P46-201ENST00000520062 ERO1BQ86YB8 467 aa3.26□□□□□ -1.89
HMGB1P46-201ENST00000520062 TTLQ8NG68 377 aa3.26□□□□□ -1.89
HMGB1P46-201ENST00000520062 LINC01560Q8TB33 94 aa3.26□□□□□ -1.89
HMGB1P46-201ENST00000520062 DOK4Q8TEW6 326 aa3.26□□□□□ -1.89
HMGB1P46-201ENST00000520062 GHSRQ92847 366 aa3.26□□□□□ -1.89
HMGB1P46-201ENST00000520062 MRPL48Q96GC5 212 aaKnown RBP3.26□□□□□ -1.89
HMGB1P46-201ENST00000520062 SNF8Q96H20 258 aa3.26□□□□□ -1.89
HMGB1P46-201ENST00000520062 TBL1YQ9BQ87 522 aa3.26□□□□□ -1.89
HMGB1P46-201ENST00000520062 C20orf144Q9BQM9 153 aa3.26□□□□□ -1.89
HMGB1P46-201ENST00000520062 CHCHD7Q9BUK0 85 aa3.26□□□□□ -1.89
HMGB1P46-201ENST00000520062 PRORYQ9H606 182 aa3.26□□□□□ -1.89
HMGB1P46-201ENST00000520062 PLEKHF2Q9H8W4 249 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms