RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 NUDT16L1Q9BRJ7 211 aaKnown RBP13□□□□□ -0.33
TRAPPC9-205ENST00000518839 THAP7Q9BT49 309 aaPredicted RBP13□□□□□ -0.33
TRAPPC9-205ENST00000518839 CST11Q9H112 138 aa13□□□□□ -0.33
TRAPPC9-205ENST00000518839 ATG5Q9H1Y0 275 aa13□□□□□ -0.33
TRAPPC9-205ENST00000518839 MRPS7Q9Y2R9 242 aaKnown RBP13□□□□□ -0.33
TRAPPC9-205ENST00000518839 CACNA1AO00555 2505 aa13□□□□□ -0.33
TRAPPC9-205ENST00000518839 MYO7BQ6PIF6 2116 aa13□□□□□ -0.33
TRAPPC9-205ENST00000518839 ZFHX4Q86UP3 3567 aa12.99□□□□□ -0.33
TRAPPC9-205ENST00000518839 TMEM14DPA8MWL7 114 aa12.99□□□□□ -0.33
TRAPPC9-205ENST00000518839 EEF1E1-BLOC1S5C9J1V9 151 aa12.99□□□□□ -0.33
TRAPPC9-205ENST00000518839 GABARAPH6UMI1 98 aa12.99□□□□□ -0.33
TRAPPC9-205ENST00000518839 EEF1E1O43324 174 aaKnown RBP12.99□□□□□ -0.33
TRAPPC9-205ENST00000518839 CELA3BP08861 270 aa12.99□□□□□ -0.33
TRAPPC9-205ENST00000518839 NAT2P11245 290 aa12.99□□□□□ -0.33
TRAPPC9-205ENST00000518839 PTGFRP43088 359 aa12.99□□□□□ -0.33
TRAPPC9-205ENST00000518839 CA7P43166 264 aa12.99□□□□□ -0.33
TRAPPC9-205ENST00000518839 RAD52P43351 418 aa12.99□□□□□ -0.33
TRAPPC9-205ENST00000518839 MTCP1P56278 107 aa12.99□□□□□ -0.33
TRAPPC9-205ENST00000518839 TAS2R20P59543 309 aa12.99□□□□□ -0.33
TRAPPC9-205ENST00000518839 PPP1CBP62140 327 aa12.99□□□□□ -0.33
TRAPPC9-205ENST00000518839 MADCAM1Q13477 382 aa12.99□□□□□ -0.33
TRAPPC9-205ENST00000518839 PLCXD3Q63HM9 321 aa12.99□□□□□ -0.33
TRAPPC9-205ENST00000518839 GLIPR1L1Q6UWM5 242 aa12.99□□□□□ -0.33
TRAPPC9-205ENST00000518839 CDH24Q86UP0 819 aa12.99□□□□□ -0.33
TRAPPC9-205ENST00000518839 SMIM4Q8WVI0 70 aa12.99□□□□□ -0.33
TRAPPC9-205ENST00000518839 TNFAIP8L1Q8WVP5 186 aa12.99□□□□□ -0.33
TRAPPC9-205ENST00000518839 PIGCQ92535 297 aa12.99□□□□□ -0.33
TRAPPC9-205ENST00000518839 COX4I2Q96KJ9 171 aa12.99□□□□□ -0.33
TRAPPC9-205ENST00000518839 DMRTA2Q96SC8 542 aa12.99□□□□□ -0.33
TRAPPC9-205ENST00000518839 BCL2L14Q9BZR8 327 aa12.99□□□□□ -0.33
TRAPPC9-205ENST00000518839 SH3BGRL2Q9UJC5 107 aa12.99□□□□□ -0.33
TRAPPC9-205ENST00000518839 TRGV8A0A0C4DH27 118 aa12.98□□□□□ -0.33
TRAPPC9-205ENST00000518839 ANKRD30BLA7E2S9 258 aa12.98□□□□□ -0.33
TRAPPC9-205ENST00000518839 CD300LBA8K4G0 201 aa12.98□□□□□ -0.33
TRAPPC9-205ENST00000518839 AGFG2O95081 481 aa12.98□□□□□ -0.33
TRAPPC9-205ENST00000518839 CHRM2P08172 466 aa12.98□□□□□ -0.33
TRAPPC9-205ENST00000518839 VSIG8P0DPA2 414 aa12.98□□□□□ -0.33
TRAPPC9-205ENST00000518839 ZNF35P13682 527 aa12.98□□□□□ -0.33
TRAPPC9-205ENST00000518839 RAC2P15153 192 aa12.98□□□□□ -0.33
TRAPPC9-205ENST00000518839 OR3A4PP47883 348 aa12.98□□□□□ -0.33
TRAPPC9-205ENST00000518839 PTH2RP49190 550 aa12.98□□□□□ -0.33
TRAPPC9-205ENST00000518839 EFNB2P52799 333 aa12.98□□□□□ -0.33
TRAPPC9-205ENST00000518839 UCP2P55851 309 aa12.98□□□□□ -0.33
TRAPPC9-205ENST00000518839 QRFPP83859 136 aa12.98□□□□□ -0.33
TRAPPC9-205ENST00000518839 GPR176Q14439 515 aa12.98□□□□□ -0.33
TRAPPC9-205ENST00000518839 MZT2BQ6NZ67 158 aa12.98□□□□□ -0.33
TRAPPC9-205ENST00000518839 ZDHHC23Q8IYP9 409 aa12.98□□□□□ -0.33
TRAPPC9-205ENST00000518839 DTX3Q8N9I9 347 aa12.98□□□□□ -0.33
TRAPPC9-205ENST00000518839 NPRL2Q8WTW4 380 aa12.98□□□□□ -0.33
TRAPPC9-205ENST00000518839 FCAMRQ8WWV6 532 aa12.98□□□□□ -0.33
TRAPPC9-205ENST00000518839 S100PBPQ96BU1 408 aa12.98□□□□□ -0.33
TRAPPC9-205ENST00000518839 ITPKCQ96DU7 683 aa12.98□□□□□ -0.33
TRAPPC9-205ENST00000518839 SPACA5Q96QH8 159 aa12.98□□□□□ -0.33
TRAPPC9-205ENST00000518839 HIST1H2AAQ96QV6 131 aa12.98□□□□□ -0.33
TRAPPC9-205ENST00000518839 URM1Q9BTM9 101 aaKnown RBP12.98□□□□□ -0.33
TRAPPC9-205ENST00000518839 PAPOLGQ9BWT3 736 aaKnown RBP12.98□□□□□ -0.33
TRAPPC9-205ENST00000518839 SLC22A4Q9H015 551 aa12.98□□□□□ -0.33
TRAPPC9-205ENST00000518839 PCDHB16Q9NRJ7 776 aa12.98□□□□□ -0.33
TRAPPC9-205ENST00000518839 JKAMPQ9P055 326 aa12.98□□□□□ -0.33
TRAPPC9-205ENST00000518839 TBC1D24Q9ULP9 559 aa12.98□□□□□ -0.33
TRAPPC9-205ENST00000518839 MEMO1Q9Y316 297 aa12.98□□□□□ -0.33
TRAPPC9-205ENST00000518839 NOP16Q9Y3C1 178 aaKnown RBP12.98□□□□□ -0.33
TRAPPC9-205ENST00000518839 MPC1Q9Y5U8 109 aa12.98□□□□□ -0.33
TRAPPC9-205ENST00000518839 CELSR3Q9NYQ7 3312 aa12.98□□□□□ -0.33
TRAPPC9-205ENST00000518839 LOC400499M0QZD8 3231 aa12.97□□□□□ -0.33
TRAPPC9-205ENST00000518839 IGHV1-18A0A0C4DH31 117 aa12.97□□□□□ -0.33
TRAPPC9-205ENST00000518839 FAM230AA0A1W2PPH8 454 aa12.97□□□□□ -0.33
TRAPPC9-205ENST00000518839 ZNF780AO75290 641 aaPredicted RBP12.97□□□□□ -0.33
TRAPPC9-205ENST00000518839 CECR9P0C854 216 aa12.97□□□□□ -0.33
TRAPPC9-205ENST00000518839 PRDX4Q13162 271 aa12.97□□□□□ -0.33
TRAPPC9-205ENST00000518839 HLXQ14774 488 aaPredicted RBP12.97□□□□□ -0.33
TRAPPC9-205ENST00000518839 PPA1Q15181 289 aa12.97□□□□□ -0.33
TRAPPC9-205ENST00000518839 ZNF57Q68EA5 555 aaPredicted RBP12.97□□□□□ -0.33
TRAPPC9-205ENST00000518839 MYPOPQ86VE0 399 aaPredicted RBP12.97□□□□□ -0.33
TRAPPC9-205ENST00000518839 IZUMO1Q8IYV9 350 aa12.97□□□□□ -0.33
TRAPPC9-205ENST00000518839 OR1J1Q8NGS3 322 aa12.97□□□□□ -0.33
TRAPPC9-205ENST00000518839 YIPF5Q969M3 257 aa12.97□□□□□ -0.33
TRAPPC9-205ENST00000518839 TRIM63Q969Q1 353 aa12.97□□□□□ -0.33
TRAPPC9-205ENST00000518839 NKX3-1Q99801 234 aaPredicted RBP12.97□□□□□ -0.33
TRAPPC9-205ENST00000518839 C7orf50Q9BRJ6 194 aaKnown RBP12.97□□□□□ -0.33
TRAPPC9-205ENST00000518839 ACTR6Q9GZN1 396 aa12.97□□□□□ -0.33
TRAPPC9-205ENST00000518839 METTL9Q9H1A3 318 aa12.97□□□□□ -0.33
TRAPPC9-205ENST00000518839 KCNK15Q9H427 330 aa12.97□□□□□ -0.33
TRAPPC9-205ENST00000518839 POFUT1Q9H488 388 aa12.97□□□□□ -0.33
TRAPPC9-205ENST00000518839 OCEL1Q9H607 264 aa12.97□□□□□ -0.33
TRAPPC9-205ENST00000518839 ING4Q9UNL4 249 aa12.97□□□□□ -0.33
TRAPPC9-205ENST00000518839 SPEF1Q9Y4P9 236 aa12.97□□□□□ -0.33
TRAPPC9-205ENST00000518839 SHANK1Q9Y566 2161 aa12.96□□□□□ -0.33
TRAPPC9-205ENST00000518839 TRAV18A0A075B6X5 111 aa12.96□□□□□ -0.33
TRAPPC9-205ENST00000518839 ZNF850A8MQ14 1090 aa12.96□□□□□ -0.33
TRAPPC9-205ENST00000518839 CENPXA8MT69 81 aa12.96□□□□□ -0.33
TRAPPC9-205ENST00000518839 C16orf97H3BN30 126 aa12.96□□□□□ -0.33
TRAPPC9-205ENST00000518839 SULT1C2O00338 296 aa12.96□□□□□ -0.33
TRAPPC9-205ENST00000518839 ECDO95905 644 aaPredicted RBP12.96□□□□□ -0.33
TRAPPC9-205ENST00000518839 GSTT2BP0CG30 244 aa12.96□□□□□ -0.33
TRAPPC9-205ENST00000518839 FAM157BP0CG42 384 aa12.96□□□□□ -0.33
TRAPPC9-205ENST00000518839 AP3S2P59780 193 aa12.96□□□□□ -0.33
TRAPPC9-205ENST00000518839 ZP1P60852 638 aa12.96□□□□□ -0.33
TRAPPC9-205ENST00000518839 SSBP1Q04837 148 aaKnown RBP12.96□□□□□ -0.33
TRAPPC9-205ENST00000518839 PLA2G7Q13093 441 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms