RNA–Protein interactions for RNA: ENST00000517097.1

SCARNA3-201, small Cajal body-specific RNA 3, humanhuman

BASIC

Gene SCARNA3, Length 143 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA3-201ENST00000517097 SMARCB1Q12824 385 aa1.89□□□□□ -2.11
SCARNA3-201ENST00000517097 TOMM34Q15785 309 aaPredicted RBP1.89□□□□□ -2.11
SCARNA3-201ENST00000517097 IMPG1Q17R60 797 aa1.89□□□□□ -2.11
SCARNA3-201ENST00000517097 KRTAP24-1Q3LI83 254 aa1.89□□□□□ -2.11
SCARNA3-201ENST00000517097 COA6Q5JTJ3 125 aaKnown RBP1.89□□□□□ -2.11
SCARNA3-201ENST00000517097 ZC2HC1BQ5TFG8 222 aa1.89□□□□□ -2.11
SCARNA3-201ENST00000517097 STEAP4Q687X5 459 aa1.89□□□□□ -2.11
SCARNA3-201ENST00000517097 PPP1R2P3Q6NXS1 205 aa1.89□□□□□ -2.11
SCARNA3-201ENST00000517097 MED27Q6P2C8 311 aa1.89□□□□□ -2.11
SCARNA3-201ENST00000517097 FBXW12Q6X9E4 464 aa1.89□□□□□ -2.11
SCARNA3-201ENST00000517097 H2AFVQ71UI9 128 aa1.89□□□□□ -2.11
SCARNA3-201ENST00000517097 C10orf107Q8IVU9 208 aa1.89□□□□□ -2.11
SCARNA3-201ENST00000517097 ZNF786Q8N393 782 aa1.89□□□□□ -2.11
SCARNA3-201ENST00000517097 Q8N402 240 aa1.89□□□□□ -2.11
SCARNA3-201ENST00000517097 STPG2Q8N412 459 aa1.89□□□□□ -2.11
SCARNA3-201ENST00000517097 KLHL30-AS1Q8NEE0 82 aa1.89□□□□□ -2.11
SCARNA3-201ENST00000517097 CCDC54Q8NEL0 328 aa1.89□□□□□ -2.11
SCARNA3-201ENST00000517097 ACTL9Q8TC94 416 aa1.89□□□□□ -2.11
SCARNA3-201ENST00000517097 NT5CQ8TCD5 201 aa1.89□□□□□ -2.11
SCARNA3-201ENST00000517097 PPWD1Q96BP3 646 aaKnown RBP1.89□□□□□ -2.11
SCARNA3-201ENST00000517097 S100PBPQ96BU1 408 aa1.89□□□□□ -2.11
SCARNA3-201ENST00000517097 HAUS1Q96CS2 278 aa1.89□□□□□ -2.11
SCARNA3-201ENST00000517097 DNAJC19Q96DA6 116 aa1.89□□□□□ -2.11
SCARNA3-201ENST00000517097 TMEM56Q96MV1 263 aa1.89□□□□□ -2.11
SCARNA3-201ENST00000517097 ATOH8Q96SQ7 321 aa1.89□□□□□ -2.11
SCARNA3-201ENST00000517097 TEAD3Q99594 435 aa1.89□□□□□ -2.11
SCARNA3-201ENST00000517097 GPR22Q99680 433 aa1.89□□□□□ -2.11
SCARNA3-201ENST00000517097 NRIP2Q9BQI9 281 aa1.89□□□□□ -2.11
SCARNA3-201ENST00000517097 PAXXQ9BUH6 204 aa1.89□□□□□ -2.11
SCARNA3-201ENST00000517097 ABCB9Q9NP78 766 aa1.89□□□□□ -2.11
SCARNA3-201ENST00000517097 C12orf4Q9NQ89 552 aa1.89□□□□□ -2.11
SCARNA3-201ENST00000517097 CD84Q9UIB8 345 aa1.89□□□□□ -2.11
SCARNA3-201ENST00000517097 ANXA10Q9UJ72 324 aa1.89□□□□□ -2.11
SCARNA3-201ENST00000517097 C3orf18Q9UK00 162 aa1.89□□□□□ -2.11
SCARNA3-201ENST00000517097 NDRG2Q9UN36 371 aaKnown RBP1.89□□□□□ -2.11
SCARNA3-201ENST00000517097 MOKQ9UQ07 419 aa1.89□□□□□ -2.11
SCARNA3-201ENST00000517097 HEBP2Q9Y5Z4 205 aa1.89□□□□□ -2.11
SCARNA3-201ENST00000517097 MTCH2Q9Y6C9 303 aa1.89□□□□□ -2.11
SCARNA3-201ENST00000517097 ZNF608Q9ULD9 1512 aaPredicted RBP1.89□□□□□ -2.11
SCARNA3-201ENST00000517097 NFASCO94856 1347 aa1.89□□□□□ -2.11
SCARNA3-201ENST00000517097 SVILO95425 2214 aa1.89□□□□□ -2.11
SCARNA3-201ENST00000517097 A0A087WWV3 80 aa1.88□□□□□ -2.11
SCARNA3-201ENST00000517097 SMIM26A0A096LP01 95 aa1.88□□□□□ -2.11
SCARNA3-201ENST00000517097 IGKV1-8A0A0C4DH67 115 aa1.88□□□□□ -2.11
SCARNA3-201ENST00000517097 A0A1W2PRG6 482 aa1.88□□□□□ -2.11
SCARNA3-201ENST00000517097 NDUFAF8A1L188 74 aa1.88□□□□□ -2.11
SCARNA3-201ENST00000517097 OR2AT4A6NND4 320 aa1.88□□□□□ -2.11
SCARNA3-201ENST00000517097 SRRM5B3KS81 715 aa1.88□□□□□ -2.11
SCARNA3-201ENST00000517097 LRRN3E7EW58 273 aa1.88□□□□□ -2.11
SCARNA3-201ENST00000517097 GOLGA6L19H0YKK7 550 aa1.88□□□□□ -2.11
SCARNA3-201ENST00000517097 UBDO15205 165 aa1.88□□□□□ -2.11
SCARNA3-201ENST00000517097 SYNGR1O43759 233 aa1.88□□□□□ -2.11
SCARNA3-201ENST00000517097 FAM189A1O60320 539 aa1.88□□□□□ -2.11
SCARNA3-201ENST00000517097 RAD1O60671 282 aa1.88□□□□□ -2.11
SCARNA3-201ENST00000517097 GLSO94925 669 aaPredicted RBP1.88□□□□□ -2.11
SCARNA3-201ENST00000517097 LYPLA2O95372 231 aa1.88□□□□□ -2.11
SCARNA3-201ENST00000517097 SLC25A27O95847 323 aa1.88□□□□□ -2.11
SCARNA3-201ENST00000517097 MOSP00540 346 aa1.88□□□□□ -2.11
SCARNA3-201ENST00000517097 IFNA5P01569 189 aa1.88□□□□□ -2.11
SCARNA3-201ENST00000517097 BGLAPP02818 100 aa1.88□□□□□ -2.11
SCARNA3-201ENST00000517097 HSPB1P04792 205 aaKnown RBP1.88□□□□□ -2.11
SCARNA3-201ENST00000517097 MMP7P09237 267 aaPredicted RBP1.88□□□□□ -2.11
SCARNA3-201ENST00000517097 GIPP09681 153 aaPredicted RBP1.88□□□□□ -2.11
SCARNA3-201ENST00000517097 CTXN2P0C2S0 81 aa1.88□□□□□ -2.11
SCARNA3-201ENST00000517097 FOLR2P14207 255 aa1.88□□□□□ -2.11
SCARNA3-201ENST00000517097 NQO1P15559 274 aaKnown RBP1.88□□□□□ -2.11
SCARNA3-201ENST00000517097 ZNF30P17039 623 aa1.88□□□□□ -2.11
SCARNA3-201ENST00000517097 PAX6P26367 422 aa1.88□□□□□ -2.11
SCARNA3-201ENST00000517097 CD70P32970 193 aa1.88□□□□□ -2.11
SCARNA3-201ENST00000517097 MEOX2P50222 304 aa1.88□□□□□ -2.11
SCARNA3-201ENST00000517097 CAV2P51636 162 aa1.88□□□□□ -2.11
SCARNA3-201ENST00000517097 CRIP2P52943 208 aaPredicted RBP1.88□□□□□ -2.11
SCARNA3-201ENST00000517097 CEBPGP53567 150 aa1.88□□□□□ -2.11
SCARNA3-201ENST00000517097 DLX6P56179 175 aa1.88□□□□□ -2.11
SCARNA3-201ENST00000517097 TAS2R46P59540 309 aa1.88□□□□□ -2.11
SCARNA3-201ENST00000517097 SLC7A9P82251 487 aa1.88□□□□□ -2.11
SCARNA3-201ENST00000517097 MLLT11Q13015 90 aaPredicted RBP1.88□□□□□ -2.11
SCARNA3-201ENST00000517097 RGNQ15493 299 aa1.88□□□□□ -2.11
SCARNA3-201ENST00000517097 Q1RN00 199 aa1.88□□□□□ -2.11
SCARNA3-201ENST00000517097 TBC1D28Q2M2D7 210 aa1.88□□□□□ -2.11
SCARNA3-201ENST00000517097 RFX4Q33E94 735 aa1.88□□□□□ -2.11
SCARNA3-201ENST00000517097 TTLL9Q3SXZ7 439 aa1.88□□□□□ -2.11
SCARNA3-201ENST00000517097 ACTBL2Q562R1 376 aa1.88□□□□□ -2.11
SCARNA3-201ENST00000517097 PDZD11Q5EBL8 140 aa1.88□□□□□ -2.11
SCARNA3-201ENST00000517097 TTC32Q5I0X7 151 aa1.88□□□□□ -2.11
SCARNA3-201ENST00000517097 METTL21CQ5VZV1 264 aa1.88□□□□□ -2.11
SCARNA3-201ENST00000517097 FBXW9Q5XUX1 488 aa1.88□□□□□ -2.11
SCARNA3-201ENST00000517097 FAAP20Q6NZ36 180 aa1.88□□□□□ -2.11
SCARNA3-201ENST00000517097 DNAJC24Q6P3W2 148 aa1.88□□□□□ -2.11
SCARNA3-201ENST00000517097 PLET1Q6UQ28 207 aa1.88□□□□□ -2.11
SCARNA3-201ENST00000517097 C18orf65Q6ZTR6 163 aa1.88□□□□□ -2.11
SCARNA3-201ENST00000517097 STRADAQ7RTN6 431 aa1.88□□□□□ -2.11
SCARNA3-201ENST00000517097 TMEM179BQ7Z7N9 219 aa1.88□□□□□ -2.11
SCARNA3-201ENST00000517097 BLIDQ8IZY5 108 aa1.88□□□□□ -2.11
SCARNA3-201ENST00000517097 LGI3Q8N145 548 aa1.88□□□□□ -2.11
SCARNA3-201ENST00000517097 COX18Q8N8Q8 333 aa1.88□□□□□ -2.11
SCARNA3-201ENST00000517097 UBAC2Q8NBM4 344 aa1.88□□□□□ -2.11
SCARNA3-201ENST00000517097 OR5M1Q8NGP8 315 aa1.88□□□□□ -2.11
SCARNA3-201ENST00000517097 OR6N1Q8NGY5 312 aa1.88□□□□□ -2.11
SCARNA3-201ENST00000517097 OR13G1Q8NGZ3 307 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms