RNA–Protein interactions for RNA: ENST00000516419.1

SNORA48.9-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 162 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48.9-201ENST00000516419 SEC16AO15027 2179 aa3.14□□□□□ -1.91
SNORA48.9-201ENST00000516419 CCL15-CCL14A0A0B4J2E2 113 aa3.14□□□□□ -1.91
SNORA48.9-201ENST00000516419 ISPDA4D126 451 aa3.14□□□□□ -1.91
SNORA48.9-201ENST00000516419 VGLL3A8MV65 326 aa3.14□□□□□ -1.91
SNORA48.9-201ENST00000516419 A8MWL6 223 aa3.14□□□□□ -1.91
SNORA48.9-201ENST00000516419 ASGR1P07306 291 aa3.14□□□□□ -1.91
SNORA48.9-201ENST00000516419 CXCR1P25024 350 aa3.14□□□□□ -1.91
SNORA48.9-201ENST00000516419 YWHAEP62258 255 aaKnown RBP3.14□□□□□ -1.91
SNORA48.9-201ENST00000516419 ELF3P78545 371 aaPredicted RBP3.14□□□□□ -1.91
SNORA48.9-201ENST00000516419 BTN1A1Q13410 526 aa3.14□□□□□ -1.91
SNORA48.9-201ENST00000516419 CCL15Q16663 113 aa3.14□□□□□ -1.91
SNORA48.9-201ENST00000516419 SLC30A8Q8IWU4 369 aa3.14□□□□□ -1.91
SNORA48.9-201ENST00000516419 C1orf64Q8NEQ6 169 aa3.14□□□□□ -1.91
SNORA48.9-201ENST00000516419 NAT6Q93015 286 aa3.14□□□□□ -1.91
SNORA48.9-201ENST00000516419 LINC00574Q9H8X3 128 aa3.14□□□□□ -1.91
SNORA48.9-201ENST00000516419 FBXO8Q9NRD0 319 aa3.14□□□□□ -1.91
SNORA48.9-201ENST00000516419 HEBP1Q9NRV9 189 aa3.14□□□□□ -1.91
SNORA48.9-201ENST00000516419 SLC22A20A6NK97 555 aa3.13□□□□□ -1.91
SNORA48.9-201ENST00000516419 LINC01619G3V211 115 aa3.13□□□□□ -1.91
SNORA48.9-201ENST00000516419 UPK1BO75841 260 aa3.13□□□□□ -1.91
SNORA48.9-201ENST00000516419 SCELO95171 688 aa3.13□□□□□ -1.91
SNORA48.9-201ENST00000516419 CD28P10747 220 aa3.13□□□□□ -1.91
SNORA48.9-201ENST00000516419 CLDN6P56747 220 aa3.13□□□□□ -1.91
SNORA48.9-201ENST00000516419 RPS11P62280 158 aaKnown RBP eCLIP3.13□□□□□ -1.91
SNORA48.9-201ENST00000516419 RAB11AP62491 216 aa3.13□□□□□ -1.91
SNORA48.9-201ENST00000516419 RAB11BQ15907 218 aa3.13□□□□□ -1.91
SNORA48.9-201ENST00000516419 TPRG1LQ5T0D9 272 aa3.13□□□□□ -1.91
SNORA48.9-201ENST00000516419 STEAP4Q687X5 459 aa3.13□□□□□ -1.91
SNORA48.9-201ENST00000516419 TMCO2Q7Z6W1 182 aaPredicted RBP3.13□□□□□ -1.91
SNORA48.9-201ENST00000516419 ORMDL3Q8N138 153 aa3.13□□□□□ -1.91
SNORA48.9-201ENST00000516419 SLC25A29Q8N8R3 303 aa3.13□□□□□ -1.91
SNORA48.9-201ENST00000516419 ZNF680Q8NEM1 530 aa3.13□□□□□ -1.91
SNORA48.9-201ENST00000516419 OR1S1Q8NH92 325 aa3.13□□□□□ -1.91
SNORA48.9-201ENST00000516419 ISOC2Q96AB3 205 aa3.13□□□□□ -1.91
SNORA48.9-201ENST00000516419 C8orf33Q9H7E9 229 aaPredicted RBP3.13□□□□□ -1.91
SNORA48.9-201ENST00000516419 CES1P1Q9UKY3 287 aa3.13□□□□□ -1.91
SNORA48.9-201ENST00000516419 WDR19Q8NEZ3 1342 aa3.13□□□□□ -1.91
SNORA48.9-201ENST00000516419 IGKV3D-11A0A0A0MRZ8 115 aa3.12□□□□□ -1.91
SNORA48.9-201ENST00000516419 A0A0B4J2E0 115 aa3.12□□□□□ -1.91
SNORA48.9-201ENST00000516419 MYL12BO14950 172 aa3.12□□□□□ -1.91
SNORA48.9-201ENST00000516419 MAS1P04201 325 aa3.12□□□□□ -1.91
SNORA48.9-201ENST00000516419 STAG3L3P0CL85 134 aa3.12□□□□□ -1.91
SNORA48.9-201ENST00000516419 GALR1P47211 349 aa3.12□□□□□ -1.91
SNORA48.9-201ENST00000516419 ATP6V0D1P61421 351 aa3.12□□□□□ -1.91
SNORA48.9-201ENST00000516419 PPP1CAP62136 330 aa3.12□□□□□ -1.91
SNORA48.9-201ENST00000516419 INCA1Q0VD86 236 aa3.12□□□□□ -1.91
SNORA48.9-201ENST00000516419 PIP5KL1Q5T9C9 394 aa3.12□□□□□ -1.91
SNORA48.9-201ENST00000516419 KDM4DQ6B0I6 523 aa3.12□□□□□ -1.91
SNORA48.9-201ENST00000516419 NDUFAF7Q7L592 441 aa3.12□□□□□ -1.91
SNORA48.9-201ENST00000516419 OR52N1Q8NH53 320 aa3.12□□□□□ -1.91
SNORA48.9-201ENST00000516419 AGR3Q8TD06 166 aa3.12□□□□□ -1.91
SNORA48.9-201ENST00000516419 RXFP2Q8WXD0 754 aa3.12□□□□□ -1.91
SNORA48.9-201ENST00000516419 TMEM159Q96B96 161 aa3.12□□□□□ -1.91
SNORA48.9-201ENST00000516419 S100PBPQ96BU1 408 aa3.12□□□□□ -1.91
SNORA48.9-201ENST00000516419 SNF8Q96H20 258 aa3.12□□□□□ -1.91
SNORA48.9-201ENST00000516419 UBE2E2Q96LR5 201 aa3.12□□□□□ -1.91
SNORA48.9-201ENST00000516419 ALS2CR12Q96Q35 445 aa3.12□□□□□ -1.91
SNORA48.9-201ENST00000516419 NAA50Q9GZZ1 169 aaKnown RBP3.12□□□□□ -1.91
SNORA48.9-201ENST00000516419 ADA2Q9NZK5 511 aa3.12□□□□□ -1.91
SNORA48.9-201ENST00000516419 IGKV2-24A0A0C4DH68 120 aa3.11□□□□□ -1.91
SNORA48.9-201ENST00000516419 OR6C70A6NIJ9 312 aa3.11□□□□□ -1.91
SNORA48.9-201ENST00000516419 HACD1B0YJ81 288 aa3.11□□□□□ -1.91
SNORA48.9-201ENST00000516419 H0YIV9 168 aa3.11□□□□□ -1.91
SNORA48.9-201ENST00000516419 H3BN98 237 aa3.11□□□□□ -1.91
SNORA48.9-201ENST00000516419 AKR7A2O43488 359 aa3.11□□□□□ -1.91
SNORA48.9-201ENST00000516419 CCDC22O60826 627 aa3.11□□□□□ -1.91
SNORA48.9-201ENST00000516419 CNMDO75829 334 aa3.11□□□□□ -1.91
SNORA48.9-201ENST00000516419 SFTPCP11686 197 aa3.11□□□□□ -1.91
SNORA48.9-201ENST00000516419 TGFBR1P36897 503 aa3.11□□□□□ -1.91
SNORA48.9-201ENST00000516419 CLDN8P56748 225 aa3.11□□□□□ -1.91
SNORA48.9-201ENST00000516419 RPL18AQ02543 176 aaKnown RBP3.11□□□□□ -1.91
SNORA48.9-201ENST00000516419 FAM53BQ14153 422 aa3.11□□□□□ -1.91
SNORA48.9-201ENST00000516419 TMEM136Q6ZRR5 245 aa3.11□□□□□ -1.91
SNORA48.9-201ENST00000516419 DAW1Q8N136 415 aa3.11□□□□□ -1.91
SNORA48.9-201ENST00000516419 TRAM1L1Q8N609 369 aa3.11□□□□□ -1.91
SNORA48.9-201ENST00000516419 WDR31Q8NA23 367 aa3.11□□□□□ -1.91
SNORA48.9-201ENST00000516419 SLC26A10Q8NG04 563 aa3.11□□□□□ -1.91
SNORA48.9-201ENST00000516419 SFXN5Q8TD22 340 aa3.11□□□□□ -1.91
SNORA48.9-201ENST00000516419 SMARCD1Q96GM5 515 aa3.11□□□□□ -1.91
SNORA48.9-201ENST00000516419 PRSS16Q9NQE7 514 aa3.11□□□□□ -1.91
SNORA48.9-201ENST00000516419 OR51B2Q9Y5P1 312 aa3.11□□□□□ -1.91
SNORA48.9-201ENST00000516419 ZNF608Q9ULD9 1512 aaPredicted RBP3.1□□□□□ -1.91
SNORA48.9-201ENST00000516419 A0A1B0GTQ1 180 aa3.1□□□□□ -1.91
SNORA48.9-201ENST00000516419 ZNF99A8MXY4 864 aaPredicted RBP3.1□□□□□ -1.91
SNORA48.9-201ENST00000516419 CASC3O15234 703 aaKnown RBP3.1□□□□□ -1.91
SNORA48.9-201ENST00000516419 IGLV7-43P04211 117 aa3.1□□□□□ -1.91
SNORA48.9-201ENST00000516419 MMP7P09237 267 aaPredicted RBP3.1□□□□□ -1.91
SNORA48.9-201ENST00000516419 RALBP11234 206 aa3.1□□□□□ -1.91
SNORA48.9-201ENST00000516419 MPIP34949 423 aa3.1□□□□□ -1.91
SNORA48.9-201ENST00000516419 PRSS3P35030 304 aa3.1□□□□□ -1.91
SNORA48.9-201ENST00000516419 TBPL2Q6SJ96 375 aa3.1□□□□□ -1.91
SNORA48.9-201ENST00000516419 LINC00336Q6ZUF6 198 aa3.1□□□□□ -1.91
SNORA48.9-201ENST00000516419 OR10Z1Q8NGY1 313 aa3.1□□□□□ -1.91
SNORA48.9-201ENST00000516419 PEX13Q92968 403 aa3.1□□□□□ -1.91
SNORA48.9-201ENST00000516419 MRPL48Q96GC5 212 aaKnown RBP3.1□□□□□ -1.91
SNORA48.9-201ENST00000516419 TMEM175Q9BSA9 504 aa3.1□□□□□ -1.91
SNORA48.9-201ENST00000516419 ANGPTL4Q9BY76 406 aa3.1□□□□□ -1.91
SNORA48.9-201ENST00000516419 FANCEQ9HB96 536 aa3.1□□□□□ -1.91
SNORA48.9-201ENST00000516419 NDRG2Q9UN36 371 aaKnown RBP3.1□□□□□ -1.91
SNORA48.9-201ENST00000516419 NCF1BA6NI72 391 aaPredicted RBP3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms