RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 ASB5Q8WWX0 329 aa6.52□□□□□ -1.37
CLIP1-205ENST00000514271 VRK1Q99986 396 aaPredicted RBP6.52□□□□□ -1.37
CLIP1-205ENST00000514271 OCSTAMPQ9BR26 566 aa6.52□□□□□ -1.37
CLIP1-205ENST00000514271 GINS4Q9BRT9 223 aa6.52□□□□□ -1.37
CLIP1-205ENST00000514271 PARD6GQ9BYG4 376 aaPredicted RBP6.52□□□□□ -1.37
CLIP1-205ENST00000514271 MRPL15Q9P015 296 aaKnown RBP6.52□□□□□ -1.37
CLIP1-205ENST00000514271 OSGIN2Q9Y236 505 aa6.52□□□□□ -1.37
CLIP1-205ENST00000514271 GOLGA4Q13439 2230 aaKnown RBP6.52□□□□□ -1.37
CLIP1-205ENST00000514271 TMEM14DPA8MWL7 114 aa6.52□□□□□ -1.37
CLIP1-205ENST00000514271 NUPL2O15504 423 aaKnown RBP6.52□□□□□ -1.37
CLIP1-205ENST00000514271 ZFAND5O76080 213 aa6.52□□□□□ -1.37
CLIP1-205ENST00000514271 OPN1LWP04000 364 aa6.52□□□□□ -1.37
CLIP1-205ENST00000514271 PTAFRP25105 342 aa6.52□□□□□ -1.37
CLIP1-205ENST00000514271 G0S2P27469 103 aa6.52□□□□□ -1.37
CLIP1-205ENST00000514271 PSMD4P55036 377 aaKnown RBP6.52□□□□□ -1.37
CLIP1-205ENST00000514271 PRSS12P56730 875 aa6.52□□□□□ -1.37
CLIP1-205ENST00000514271 STEAP1BQ6NZ63 245 aa6.52□□□□□ -1.37
CLIP1-205ENST00000514271 DCXRQ7Z4W1 244 aa6.52□□□□□ -1.37
CLIP1-205ENST00000514271 LRRC25Q8N386 305 aaPredicted RBP6.52□□□□□ -1.37
CLIP1-205ENST00000514271 FAM89BQ8N5H3 189 aa6.52□□□□□ -1.37
CLIP1-205ENST00000514271 PTCHD1Q96NR3 888 aa6.52□□□□□ -1.37
CLIP1-205ENST00000514271 DNAJB11Q9UBS4 358 aa6.52□□□□□ -1.37
CLIP1-205ENST00000514271 SDK1Q7Z5N4 2213 aa6.52□□□□□ -1.37
CLIP1-205ENST00000514271 ZFHX2Q9C0A1 2572 aaPredicted RBP6.51□□□□□ -1.37
CLIP1-205ENST00000514271 TRBV2A0A0J9YWF9 115 aa6.51□□□□□ -1.37
CLIP1-205ENST00000514271 DUXAA6NLW8 204 aa6.51□□□□□ -1.37
CLIP1-205ENST00000514271 TMEM212A6NML5 194 aa6.51□□□□□ -1.37
CLIP1-205ENST00000514271 GMFGO60234 142 aa6.51□□□□□ -1.37
CLIP1-205ENST00000514271 ZNF17P17021 662 aa6.51□□□□□ -1.37
CLIP1-205ENST00000514271 UCP1P25874 307 aa6.51□□□□□ -1.37
CLIP1-205ENST00000514271 PGDP52209 483 aa6.51□□□□□ -1.37
CLIP1-205ENST00000514271 NSDHLQ15738 373 aa6.51□□□□□ -1.37
CLIP1-205ENST00000514271 TBR1Q16650 682 aa6.51□□□□□ -1.37
CLIP1-205ENST00000514271 ZSWIM7Q19AV6 140 aa6.51□□□□□ -1.37
CLIP1-205ENST00000514271 CDNFQ49AH0 187 aa6.51□□□□□ -1.37
CLIP1-205ENST00000514271 CDPF1Q6NVV7 123 aa6.51□□□□□ -1.37
CLIP1-205ENST00000514271 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.51□□□□□ -1.37
CLIP1-205ENST00000514271 ZNF546Q86UE3 836 aa6.51□□□□□ -1.37
CLIP1-205ENST00000514271 OR10H4Q8NGA5 316 aa6.51□□□□□ -1.37
CLIP1-205ENST00000514271 OR1N1Q8NGS0 311 aa6.51□□□□□ -1.37
CLIP1-205ENST00000514271 OR1J4Q8NGS1 313 aa6.51□□□□□ -1.37
CLIP1-205ENST00000514271 PPP1R1CQ8WVI7 109 aa6.51□□□□□ -1.37
CLIP1-205ENST00000514271 C3orf49Q96BT1 292 aa6.51□□□□□ -1.37
CLIP1-205ENST00000514271 ZFP3Q96NJ6 502 aa6.51□□□□□ -1.37
CLIP1-205ENST00000514271 CST11Q9H112 138 aa6.51□□□□□ -1.37
CLIP1-205ENST00000514271 SAV1Q9H4B6 383 aaPredicted RBP6.51□□□□□ -1.37
CLIP1-205ENST00000514271 TMEM138Q9NPI0 162 aa6.51□□□□□ -1.37
CLIP1-205ENST00000514271 STARD5Q9NSY2 213 aa6.51□□□□□ -1.37
CLIP1-205ENST00000514271 TREM2Q9NZC2 230 aa6.51□□□□□ -1.37
CLIP1-205ENST00000514271 GPR132Q9UNW8 380 aa6.51□□□□□ -1.37
CLIP1-205ENST00000514271 MRPS2Q9Y399 296 aaKnown RBP6.51□□□□□ -1.37
CLIP1-205ENST00000514271 KIF26BQ2KJY2 2108 aa6.51□□□□□ -1.37
CLIP1-205ENST00000514271 NCKAP5O14513 1909 aa6.51□□□□□ -1.37
CLIP1-205ENST00000514271 NPIPB13A6NJU9 1138 aa6.51□□□□□ -1.37
CLIP1-205ENST00000514271 NPIPB4C9JG80 1138 aa6.51□□□□□ -1.37
CLIP1-205ENST00000514271 ANXA2P07355 339 aaKnown RBP6.51□□□□□ -1.37
CLIP1-205ENST00000514271 COX5BP10606 129 aa6.51□□□□□ -1.37
CLIP1-205ENST00000514271 CPMP14384 443 aa6.51□□□□□ -1.37
CLIP1-205ENST00000514271 CCL1P22362 96 aa6.51□□□□□ -1.37
CLIP1-205ENST00000514271 OTX2P32243 289 aa6.51□□□□□ -1.37
CLIP1-205ENST00000514271 PTGER1P34995 402 aa6.51□□□□□ -1.37
CLIP1-205ENST00000514271 SPCS3P61009 180 aa6.51□□□□□ -1.37
CLIP1-205ENST00000514271 WDR38Q5JTN6 314 aa6.51□□□□□ -1.37
CLIP1-205ENST00000514271 RTN4RL2Q86UN3 420 aa6.51□□□□□ -1.37
CLIP1-205ENST00000514271 C12orf45Q8N5I9 185 aaPredicted RBP6.51□□□□□ -1.37
CLIP1-205ENST00000514271 C14orf144Q96I85 54 aa6.51□□□□□ -1.37
CLIP1-205ENST00000514271 CNTNAP3BQ96NU0 1288 aa6.51□□□□□ -1.37
CLIP1-205ENST00000514271 TSPAN32Q96QS1 320 aa6.51□□□□□ -1.37
CLIP1-205ENST00000514271 KLHDC3Q9BQ90 382 aa6.51□□□□□ -1.37
CLIP1-205ENST00000514271 SYT3Q9BQG1 590 aa6.51□□□□□ -1.37
CLIP1-205ENST00000514271 CNTNAP3Q9BZ76 1288 aa6.51□□□□□ -1.37
CLIP1-205ENST00000514271 MYO15AQ9UKN7 3530 aa6.51□□□□□ -1.37
CLIP1-205ENST00000514271 FER1L5A0AVI2 2057 aa6.51□□□□□ -1.37
CLIP1-205ENST00000514271 AGRPO00253 132 aa6.51□□□□□ -1.37
CLIP1-205ENST00000514271 ADAM20O43506 726 aa6.51□□□□□ -1.37
CLIP1-205ENST00000514271 OR10H2O60403 315 aa6.51□□□□□ -1.37
CLIP1-205ENST00000514271 KHDRBS3O75525 346 aaKnown RBP6.51□□□□□ -1.37
CLIP1-205ENST00000514271 SPDEFO95238 335 aa6.51□□□□□ -1.37
CLIP1-205ENST00000514271 F12P00748 615 aaPredicted RBP6.51□□□□□ -1.37
CLIP1-205ENST00000514271 MRPL3P09001 348 aaKnown RBP6.51□□□□□ -1.37
CLIP1-205ENST00000514271 GKN3PP0CG01 181 aa6.51□□□□□ -1.37
CLIP1-205ENST00000514271 TBPP20226 339 aa6.51□□□□□ -1.37
CLIP1-205ENST00000514271 TUBG1P23258 451 aa6.51□□□□□ -1.37
CLIP1-205ENST00000514271 SNCAP37840 140 aa6.51□□□□□ -1.37
CLIP1-205ENST00000514271 CX3CR1P49238 355 aa6.51□□□□□ -1.37
CLIP1-205ENST00000514271 F2RL1P55085 397 aa6.51□□□□□ -1.37
CLIP1-205ENST00000514271 TAS2R19P59542 299 aa6.51□□□□□ -1.37
CLIP1-205ENST00000514271 FUT7Q11130 342 aa6.51□□□□□ -1.37
CLIP1-205ENST00000514271 SKP2Q13309 424 aa6.51□□□□□ -1.37
CLIP1-205ENST00000514271 PPP1R1AQ13522 171 aa6.51□□□□□ -1.37
CLIP1-205ENST00000514271 ZNF74Q16587 644 aa6.51□□□□□ -1.37
CLIP1-205ENST00000514271 TRMT12Q53H54 448 aaKnown RBP6.51□□□□□ -1.37
CLIP1-205ENST00000514271 PYY3Q5JQD4 70 aa6.51□□□□□ -1.37
CLIP1-205ENST00000514271 SLC29A4Q7RTT9 530 aa6.51□□□□□ -1.37
CLIP1-205ENST00000514271 DMRTC2Q8IXT2 367 aaPredicted RBP6.51□□□□□ -1.37
CLIP1-205ENST00000514271 LRRC18Q8N456 261 aa6.51□□□□□ -1.37
CLIP1-205ENST00000514271 ZNF511Q8NB15 262 aa6.51□□□□□ -1.37
CLIP1-205ENST00000514271 NFAM1Q8NET5 270 aaPredicted RBP6.51□□□□□ -1.37
CLIP1-205ENST00000514271 CYYR1Q96J86 154 aa6.51□□□□□ -1.37
CLIP1-205ENST00000514271 CITED2Q99967 270 aaPredicted RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms