RNA–Protein interactions for RNA: ENST00000512452.1

DEPDC1B-206, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-206ENST00000512452 HCKP08631 526 aa11.42□□□□□ -0.58
DEPDC1B-206ENST00000512452 RIPPLY1Q0D2K3 151 aa11.42□□□□□ -0.58
DEPDC1B-206ENST00000512452 PMPCAQ10713 525 aa11.42□□□□□ -0.58
DEPDC1B-206ENST00000512452 EIF2S3LQ2VIR3 472 aaKnown RBP11.42□□□□□ -0.58
DEPDC1B-206ENST00000512452 DEFB109BQ30KR1 87 aa11.42□□□□□ -0.58
DEPDC1B-206ENST00000512452 RNASE12Q5GAN4 147 aaKnown RBP11.42□□□□□ -0.58
DEPDC1B-206ENST00000512452 AWAT2Q6E213 333 aa11.42□□□□□ -0.58
DEPDC1B-206ENST00000512452 BIVMQ86UB2 503 aa11.42□□□□□ -0.58
DEPDC1B-206ENST00000512452 SEMA6DQ8NFY4 1073 aa11.42□□□□□ -0.58
DEPDC1B-206ENST00000512452 KCNG3Q8TAE7 436 aa11.42□□□□□ -0.58
DEPDC1B-206ENST00000512452 SGK3Q96BR1 496 aa11.42□□□□□ -0.58
DEPDC1B-206ENST00000512452 GMPPAQ96IJ6 420 aaPredicted RBP11.42□□□□□ -0.58
DEPDC1B-206ENST00000512452 LURAP1Q96LR2 239 aa11.42□□□□□ -0.58
DEPDC1B-206ENST00000512452 TRAF4Q9BUZ4 470 aaPredicted RBP11.42□□□□□ -0.58
DEPDC1B-206ENST00000512452 MOV10Q9HCE1 1003 aaKnown RBP11.42□□□□□ -0.58
DEPDC1B-206ENST00000512452 MRPS28Q9Y2Q9 187 aaKnown RBP11.42□□□□□ -0.58
DEPDC1B-206ENST00000512452 N6AMT1Q9Y5N5 214 aa11.42□□□□□ -0.58
DEPDC1B-206ENST00000512452 NCOA6Q14686 2063 aaPredicted RBP11.42□□□□□ -0.58
DEPDC1B-206ENST00000512452 CCDC168Q8NDH2 2452 aa11.41□□□□□ -0.58
DEPDC1B-206ENST00000512452 E9PLN8 166 aa11.41□□□□□ -0.58
DEPDC1B-206ENST00000512452 SS18L1O75177 396 aaPredicted RBP11.41□□□□□ -0.58
DEPDC1B-206ENST00000512452 KDM4BO94953 1096 aa11.41□□□□□ -0.58
DEPDC1B-206ENST00000512452 DBHP09172 617 aa11.41□□□□□ -0.58
DEPDC1B-206ENST00000512452 H2AFB2P0C5Z0 115 aa11.41□□□□□ -0.58
DEPDC1B-206ENST00000512452 VSIG8P0DPA2 414 aa11.41□□□□□ -0.58
DEPDC1B-206ENST00000512452 PSMB1P20618 241 aaKnown RBP11.41□□□□□ -0.58
DEPDC1B-206ENST00000512452 PRKACBP22694 351 aa11.41□□□□□ -0.58
DEPDC1B-206ENST00000512452 GIFP27352 417 aa11.41□□□□□ -0.58
DEPDC1B-206ENST00000512452 MPGP29372 298 aa11.41□□□□□ -0.58
DEPDC1B-206ENST00000512452 AGTR1P30556 359 aa11.41□□□□□ -0.58
DEPDC1B-206ENST00000512452 OR3A2P47893 321 aa11.41□□□□□ -0.58
DEPDC1B-206ENST00000512452 RRAS2P62070 204 aaPredicted RBP11.41□□□□□ -0.58
DEPDC1B-206ENST00000512452 TMEM53Q6P2H8 277 aa11.41□□□□□ -0.58
DEPDC1B-206ENST00000512452 COLCA1Q6ZS62 124 aa11.41□□□□□ -0.58
DEPDC1B-206ENST00000512452 NAA40Q86UY6 237 aa11.41□□□□□ -0.58
DEPDC1B-206ENST00000512452 ANGPTL5Q86XS5 388 aa11.41□□□□□ -0.58
DEPDC1B-206ENST00000512452 ZADH2Q8N4Q0 377 aa11.41□□□□□ -0.58
DEPDC1B-206ENST00000512452 TMEM229BQ8NBD8 167 aa11.41□□□□□ -0.58
DEPDC1B-206ENST00000512452 AKR7LQ8NHP1 331 aa11.41□□□□□ -0.58
DEPDC1B-206ENST00000512452 UBASH3BQ8TF42 649 aa11.41□□□□□ -0.58
DEPDC1B-206ENST00000512452 SPSB4Q96A44 273 aa11.41□□□□□ -0.58
DEPDC1B-206ENST00000512452 SARAFQ96BY9 339 aa11.41□□□□□ -0.58
DEPDC1B-206ENST00000512452 ABHD17AQ96GS6 310 aa11.41□□□□□ -0.58
DEPDC1B-206ENST00000512452 REEP6Q96HR9 211 aa11.41□□□□□ -0.58
DEPDC1B-206ENST00000512452 ST6GAL2Q96JF0 529 aa11.41□□□□□ -0.58
DEPDC1B-206ENST00000512452 C1QTNF5Q9BXJ0 243 aa11.41□□□□□ -0.58
DEPDC1B-206ENST00000512452 PLSCR2Q9NRY7 297 aa11.41□□□□□ -0.58
DEPDC1B-206ENST00000512452 NUDT15Q9NV35 164 aa11.41□□□□□ -0.58
DEPDC1B-206ENST00000512452 ZNF224Q9NZL3 707 aa11.41□□□□□ -0.58
DEPDC1B-206ENST00000512452 KLK11Q9UBX7 282 aa11.41□□□□□ -0.58
DEPDC1B-206ENST00000512452 ERRFI1Q9UJM3 462 aaPredicted RBP11.41□□□□□ -0.58
DEPDC1B-206ENST00000512452 PIGLQ9Y2B2 252 aa11.41□□□□□ -0.58
DEPDC1B-206ENST00000512452 NIPBLQ6KC79 2804 aaeCLIP11.41□□□□□ -0.58
DEPDC1B-206ENST00000512452 IGKV1-9A0A0C4DH69 117 aa11.4□□□□□ -0.58
DEPDC1B-206ENST00000512452 RAB27BO00194 218 aa11.4□□□□□ -0.58
DEPDC1B-206ENST00000512452 CNOT4O95628 575 aaKnown RBP11.4□□□□□ -0.58
DEPDC1B-206ENST00000512452 MT-ND4P03905 459 aa11.4□□□□□ -0.58
DEPDC1B-206ENST00000512452 LCATP04180 440 aa11.4□□□□□ -0.58
DEPDC1B-206ENST00000512452 SERPINA5P05154 406 aa11.4□□□□□ -0.58
DEPDC1B-206ENST00000512452 AKAIN1P0CW23 69 aa11.4□□□□□ -0.58
DEPDC1B-206ENST00000512452 NAT2P11245 290 aa11.4□□□□□ -0.58
DEPDC1B-206ENST00000512452 MECP2P51608 486 aaKnown RBP11.4□□□□□ -0.58
DEPDC1B-206ENST00000512452 TAS2R19P59542 299 aa11.4□□□□□ -0.58
DEPDC1B-206ENST00000512452 CD300CQ08708 224 aa11.4□□□□□ -0.58
DEPDC1B-206ENST00000512452 UNC119Q13432 240 aa11.4□□□□□ -0.58
DEPDC1B-206ENST00000512452 ARL6IP1Q15041 203 aa11.4□□□□□ -0.58
DEPDC1B-206ENST00000512452 CNN3Q15417 329 aaKnown RBP11.4□□□□□ -0.58
DEPDC1B-206ENST00000512452 CARTPTQ16568 116 aa11.4□□□□□ -0.58
DEPDC1B-206ENST00000512452 GFOD2Q3B7J2 385 aa11.4□□□□□ -0.58
DEPDC1B-206ENST00000512452 SNAI3Q3KNW1 292 aa11.4□□□□□ -0.58
DEPDC1B-206ENST00000512452 TBRG1Q3YBR2 411 aa11.4□□□□□ -0.58
DEPDC1B-206ENST00000512452 PABPC1L2AQ5JQF8 200 aa11.4□□□□□ -0.58
DEPDC1B-206ENST00000512452 TMEM42Q69YG0 159 aa11.4□□□□□ -0.58
DEPDC1B-206ENST00000512452 GLCCI1Q86VQ1 547 aa11.4□□□□□ -0.58
DEPDC1B-206ENST00000512452 CCDC36Q8IYA8 594 aa11.4□□□□□ -0.58
DEPDC1B-206ENST00000512452 TCTE3Q8IZS6 198 aa11.4□□□□□ -0.58
DEPDC1B-206ENST00000512452 PAQR4Q8N4S7 273 aaPredicted RBP11.4□□□□□ -0.58
DEPDC1B-206ENST00000512452 AQP3Q92482 292 aa11.4□□□□□ -0.58
DEPDC1B-206ENST00000512452 SEH1LQ96EE3 360 aa11.4□□□□□ -0.58
DEPDC1B-206ENST00000512452 C1orf147Q96MC9 270 aaPredicted RBP11.4□□□□□ -0.58
DEPDC1B-206ENST00000512452 MDFIQ99750 246 aa11.4□□□□□ -0.58
DEPDC1B-206ENST00000512452 SOX7Q9BT81 388 aa11.4□□□□□ -0.58
DEPDC1B-206ENST00000512452 URM1Q9BTM9 101 aaKnown RBP11.4□□□□□ -0.58
DEPDC1B-206ENST00000512452 CST11Q9H112 138 aa11.4□□□□□ -0.58
DEPDC1B-206ENST00000512452 OPA3Q9H6K4 179 aa11.4□□□□□ -0.58
DEPDC1B-206ENST00000512452 CLCF1Q9UBD9 225 aa11.4□□□□□ -0.58
DEPDC1B-206ENST00000512452 C5orf63A6NC05 138 aa11.39□□□□□ -0.59
DEPDC1B-206ENST00000512452 OR14I1A6ND48 311 aa11.39□□□□□ -0.59
DEPDC1B-206ENST00000512452 PEX14O75381 377 aa11.39□□□□□ -0.59
DEPDC1B-206ENST00000512452 GSTP1P09211 210 aaKnown RBP11.39□□□□□ -0.59
DEPDC1B-206ENST00000512452 RCVRNP35243 200 aa11.39□□□□□ -0.59
DEPDC1B-206ENST00000512452 PTGFRP43088 359 aa11.39□□□□□ -0.59
DEPDC1B-206ENST00000512452 ZNF169Q14929 603 aaPredicted RBP11.39□□□□□ -0.59
DEPDC1B-206ENST00000512452 SF3B4Q15427 424 aaKnown RBP eCLIP11.39□□□□□ -0.59
DEPDC1B-206ENST00000512452 OR8B8Q15620 311 aa11.39□□□□□ -0.59
DEPDC1B-206ENST00000512452 KISS1Q15726 138 aa11.39□□□□□ -0.59
DEPDC1B-206ENST00000512452 PCGF3Q3KNV8 242 aa11.39□□□□□ -0.59
DEPDC1B-206ENST00000512452 ZNF260Q3ZCT1 412 aa11.39□□□□□ -0.59
DEPDC1B-206ENST00000512452 ATAD3CQ5T2N8 411 aa11.39□□□□□ -0.59
DEPDC1B-206ENST00000512452 FBXW9Q5XUX1 488 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms