RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 CAB39Q9Y376 341 aaPredicted RBP7.4□□□□□ -1.22
NUP54-211ENST00000512151 ADAM18Q9Y3Q7 739 aa7.4□□□□□ -1.22
NUP54-211ENST00000512151 CDH10Q9Y6N8 788 aa7.4□□□□□ -1.22
NUP54-211ENST00000512151 KIAA1109Q2LD37 5005 aa7.4□□□□□ -1.23
NUP54-211ENST00000512151 FRAS1Q86XX4 4008 aa7.4□□□□□ -1.23
NUP54-211ENST00000512151 H0YAE9 185 aa7.39□□□□□ -1.23
NUP54-211ENST00000512151 BHLHE40O14503 412 aa7.39□□□□□ -1.23
NUP54-211ENST00000512151 ADAM20O43506 726 aa7.39□□□□□ -1.23
NUP54-211ENST00000512151 FAM20BO75063 409 aa7.39□□□□□ -1.23
NUP54-211ENST00000512151 TFAP2AP05549 437 aa7.39□□□□□ -1.23
NUP54-211ENST00000512151 PF4V1P10720 104 aa7.39□□□□□ -1.23
NUP54-211ENST00000512151 ZNF84P51523 738 aa7.39□□□□□ -1.23
NUP54-211ENST00000512151 MRPS34P82930 218 aaKnown RBP7.39□□□□□ -1.23
NUP54-211ENST00000512151 CD83Q01151 205 aa7.39□□□□□ -1.23
NUP54-211ENST00000512151 DCTN2Q13561 401 aaKnown RBP7.39□□□□□ -1.23
NUP54-211ENST00000512151 GINS1Q14691 196 aa7.39□□□□□ -1.23
NUP54-211ENST00000512151 PTGES3Q15185 160 aaKnown RBP7.39□□□□□ -1.23
NUP54-211ENST00000512151 SGCAQ16586 387 aa7.39□□□□□ -1.23
NUP54-211ENST00000512151 TCTEX1D4Q5JR98 221 aa7.39□□□□□ -1.23
NUP54-211ENST00000512151 ARMC4Q5T2S8 1044 aa7.39□□□□□ -1.23
NUP54-211ENST00000512151 SFRP4Q6FHJ7 346 aaPredicted RBP7.39□□□□□ -1.23
NUP54-211ENST00000512151 METAP1DQ6UB28 335 aaPredicted RBP7.39□□□□□ -1.23
NUP54-211ENST00000512151 DPY19L2P2Q6ZN68 376 aa7.39□□□□□ -1.23
NUP54-211ENST00000512151 Q8N2B8 174 aa7.39□□□□□ -1.23
NUP54-211ENST00000512151 IQCF1Q8N6M8 205 aa7.39□□□□□ -1.23
NUP54-211ENST00000512151 Q8N7P7 452 aa7.39□□□□□ -1.23
NUP54-211ENST00000512151 BEND2Q8NDZ0 799 aa7.39□□□□□ -1.23
NUP54-211ENST00000512151 NPRL2Q8WTW4 380 aa7.39□□□□□ -1.23
NUP54-211ENST00000512151 ASB10Q8WXI3 467 aa7.39□□□□□ -1.23
NUP54-211ENST00000512151 HDAC2Q92769 488 aaKnown RBP7.39□□□□□ -1.23
NUP54-211ENST00000512151 TNFRSF14Q92956 283 aa7.39□□□□□ -1.23
NUP54-211ENST00000512151 RASD2Q96D21 266 aa7.39□□□□□ -1.23
NUP54-211ENST00000512151 NMD3Q96D46 503 aaKnown RBP7.39□□□□□ -1.23
NUP54-211ENST00000512151 Q96M85 177 aa7.39□□□□□ -1.23
NUP54-211ENST00000512151 RDH12Q96NR8 316 aa7.39□□□□□ -1.23
NUP54-211ENST00000512151 OR5M11Q96RB7 305 aa7.39□□□□□ -1.23
NUP54-211ENST00000512151 NKX3-1Q99801 234 aaPredicted RBP7.39□□□□□ -1.23
NUP54-211ENST00000512151 ADI1Q9BV57 179 aa7.39□□□□□ -1.23
NUP54-211ENST00000512151 GABARAPL3Q9BY60 117 aa7.39□□□□□ -1.23
NUP54-211ENST00000512151 MRPL13Q9BYD1 178 aaKnown RBP7.39□□□□□ -1.23
NUP54-211ENST00000512151 TXNIPQ9H3M7 391 aa7.39□□□□□ -1.23
NUP54-211ENST00000512151 ZNF556Q9HAH1 456 aa7.39□□□□□ -1.23
NUP54-211ENST00000512151 SMPD3Q9NY59 655 aaPredicted RBP7.39□□□□□ -1.23
NUP54-211ENST00000512151 IER3IP1Q9Y5U9 82 aa7.39□□□□□ -1.23
NUP54-211ENST00000512151 KPTNQ9Y664 436 aa7.39□□□□□ -1.23
NUP54-211ENST00000512151 ALMS1Q8TCU4 4167 aa7.39□□□□□ -1.23
NUP54-211ENST00000512151 A0A1B0GVI7 797 aa7.38□□□□□ -1.23
NUP54-211ENST00000512151 A0A1B0GW55 424 aa7.38□□□□□ -1.23
NUP54-211ENST00000512151 MEIOCA2RUB1 952 aa7.38□□□□□ -1.23
NUP54-211ENST00000512151 TRIM64CA6NLI5 447 aa7.38□□□□□ -1.23
NUP54-211ENST00000512151 LRRC30A6NM36 301 aa7.38□□□□□ -1.23
NUP54-211ENST00000512151 ZAR1LA6NP61 321 aa7.38□□□□□ -1.23
NUP54-211ENST00000512151 H3BN98 237 aa7.38□□□□□ -1.23
NUP54-211ENST00000512151 TRMUO75648 421 aaKnown RBP7.38□□□□□ -1.23
NUP54-211ENST00000512151 DUS4LO95620 317 aaKnown RBP7.38□□□□□ -1.23
NUP54-211ENST00000512151 ABHD16AO95870 558 aa7.38□□□□□ -1.23
NUP54-211ENST00000512151 TXNDC12O95881 172 aa7.38□□□□□ -1.23
NUP54-211ENST00000512151 PAHP00439 452 aa7.38□□□□□ -1.23
NUP54-211ENST00000512151 IGHG1P01857 330 aa7.38□□□□□ -1.23
NUP54-211ENST00000512151 PF4P02776 101 aa7.38□□□□□ -1.23
NUP54-211ENST00000512151 CD14P08571 375 aa7.38□□□□□ -1.23
NUP54-211ENST00000512151 DUX4L2P0CJ85 424 aa7.38□□□□□ -1.23
NUP54-211ENST00000512151 DUX4L3P0CJ86 424 aa7.38□□□□□ -1.23
NUP54-211ENST00000512151 DUX4L4P0CJ87 422 aa7.38□□□□□ -1.23
NUP54-211ENST00000512151 DUX4L5P0CJ88 424 aa7.38□□□□□ -1.23
NUP54-211ENST00000512151 DUX4L6P0CJ89 424 aa7.38□□□□□ -1.23
NUP54-211ENST00000512151 DUX4L7P0CJ90 424 aa7.38□□□□□ -1.23
NUP54-211ENST00000512151 POU1F1P28069 291 aa7.38□□□□□ -1.23
NUP54-211ENST00000512151 SLC6A6P31641 620 aa7.38□□□□□ -1.23
NUP54-211ENST00000512151 CAPGP40121 348 aa7.38□□□□□ -1.23
NUP54-211ENST00000512151 CDKN2AP42771 156 aaKnown RBP7.38□□□□□ -1.23
NUP54-211ENST00000512151 SRP9P49458 86 aaKnown RBP7.38□□□□□ -1.23
NUP54-211ENST00000512151 BMXP51813 675 aa7.38□□□□□ -1.23
NUP54-211ENST00000512151 ZNF133P52736 654 aaPredicted RBP7.38□□□□□ -1.23
NUP54-211ENST00000512151 CLRN1P58418 232 aa7.38□□□□□ -1.23
NUP54-211ENST00000512151 RPL27P61353 136 aaKnown RBP7.38□□□□□ -1.23
NUP54-211ENST00000512151 ADARB1P78563 741 aaKnown RBP7.38□□□□□ -1.23
NUP54-211ENST00000512151 FMODQ06828 376 aa7.38□□□□□ -1.23
NUP54-211ENST00000512151 TOP3AQ13472 1001 aaPredicted RBP7.38□□□□□ -1.23
NUP54-211ENST00000512151 TMEM95Q3KNT9 176 aa7.38□□□□□ -1.23
NUP54-211ENST00000512151 KCTD21Q4G0X4 260 aa7.38□□□□□ -1.23
NUP54-211ENST00000512151 MESTQ5EB52 335 aa7.38□□□□□ -1.23
NUP54-211ENST00000512151 SLC35F1Q5T1Q4 408 aa7.38□□□□□ -1.23
NUP54-211ENST00000512151 C10orf128Q5T292 105 aa7.38□□□□□ -1.23
NUP54-211ENST00000512151 OR2T2Q6IF00 324 aa7.38□□□□□ -1.23
NUP54-211ENST00000512151 DUX4L9Q6RFH8 374 aaPredicted RBP7.38□□□□□ -1.23
NUP54-211ENST00000512151 Q6ZS46 218 aa7.38□□□□□ -1.23
NUP54-211ENST00000512151 PTCHD4Q6ZW05 846 aa7.38□□□□□ -1.23
NUP54-211ENST00000512151 C1orf87Q8N0U7 546 aa7.38□□□□□ -1.23
NUP54-211ENST00000512151 DHRSXQ8N5I4 330 aa7.38□□□□□ -1.23
NUP54-211ENST00000512151 LINC00482Q8N8I6 264 aa7.38□□□□□ -1.23
NUP54-211ENST00000512151 NPEPL1Q8NDH3 523 aa7.38□□□□□ -1.23
NUP54-211ENST00000512151 NOXO1Q8NFA2 376 aa7.38□□□□□ -1.23
NUP54-211ENST00000512151 Q8NFD4 153 aa7.38□□□□□ -1.23
NUP54-211ENST00000512151 PIFOQ8TCI5 191 aa7.38□□□□□ -1.23
NUP54-211ENST00000512151 ERMAPQ96PL5 475 aaPredicted RBP7.38□□□□□ -1.23
NUP54-211ENST00000512151 IFT27Q9BW83 186 aa7.38□□□□□ -1.23
NUP54-211ENST00000512151 YIPF3Q9GZM5 350 aa7.38□□□□□ -1.23
NUP54-211ENST00000512151 NPFFR1Q9GZQ6 430 aa7.38□□□□□ -1.23
NUP54-211ENST00000512151 KCNN2Q9H2S1 579 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms