RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 FOXL1Q12952 345 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 BIKQ13323 160 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 OR1Q1Q15612 314 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 TP53I3Q53FA7 332 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 ZNF385BQ569K4 471 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 OR10J3Q5JRS4 329 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 N4BP2L1Q5TBK1 243 aaPredicted RBP4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 ANKRD22Q5VYY1 191 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 SLC27A4Q6P1M0 643 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 ATRAIDQ6UW56 229 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 SLC36A1Q7Z2H8 476 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 MAVSQ7Z434 540 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 COMMD2Q86X83 199 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 RAB43Q86YS6 212 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 TCTE3Q8IZS6 198 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 OR2Z1Q8NG97 314 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 OR4K15Q8NH41 348 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 CASTOR1Q8WTX7 329 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 GATAD1Q8WUU5 269 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 DNASE2BQ8WZ79 361 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 RBPMSQ93062 196 aaKnown RBP4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 TSACCQ96A04 125 aaPredicted RBP4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 CTHRC1Q96CG8 243 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 SMIM19Q96E16 107 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 NUS1Q96E22 293 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 TRIB3Q96RU7 358 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 KCTD14Q9BQ13 255 aaPredicted RBP4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 TBL1YQ9BQ87 522 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 RIOK2Q9BVS4 552 aaKnown RBP4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 QTRT1Q9BXR0 403 aaKnown RBP4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 CHST5Q9GZS9 411 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 FAM96AQ9H5X1 160 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 TPT1P8Q9HAU6 139 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 TAS2R13Q9NYV9 303 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 SLC25A37Q9NYZ2 338 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 BFARQ9NZS9 450 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 COPZ2Q9P299 210 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 TMEM181Q9P2C4 612 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 FBXL4Q9UKA2 621 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 POMPQ9Y244 141 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 COLEC10Q9Y6Z7 277 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 NCOR2Q9Y618 2525 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 AKAP13Q12802 2813 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 CHD8Q9HCK8 2581 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 ASPDHA6ND91 283 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 TMEM202A6NGA9 273 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 SEC14L6B5MCN3 397 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 TRDCB7Z8K6 153 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 G3V4G9 280 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 J3QR06 171 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 CHEK1O14757 476 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 SYT7O43581 403 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 EFNA2O43921 213 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 BANF1O75531 89 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 OR2B3O76000 313 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 LRATO95237 230 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 SERPINA7P05543 415 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 PRSS56P0CW18 603 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 ADORA3P0DMS8 318 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 HIST1H1CP16403 213 aaKnown RBP4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 SPI1P17947 270 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 DUSP1P28562 367 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 PRDX3P30048 256 aaKnown RBP4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 P2RY1P47900 373 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 GZMKP49863 264 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 OR10A3P58181 314 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 SLC18A2Q05940 514 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 LAPTM4AQ15012 233 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 TSNQ15631 228 aaKnown RBP4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 NEDD8Q15843 81 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 ELOA3BQ3SY89 546 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 CLLU1Q5K131 121 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 DHRS13Q6UX07 377 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 ZNF367Q7RTV3 350 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 MOB3BQ86TA1 216 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 SLC22A18ASQ8N1D0 253 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 ZNF283Q8N7M2 679 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 GPR26Q8NDV2 337 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 ELOA3Q8NG57 546 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 OR13C4Q8NGS5 318 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 OR5B3Q8NH48 314 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 RHOXF1Q8NHV9 184 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 CCDC126Q96EE4 140 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 OR10C1Q96KK4 312 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 BMFQ96LC9 184 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 SGK494Q96LW2 274 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 ZNF778Q96MU6 729 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 TSSK2Q96PF2 358 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 ACTR3CQ9C0K3 210 aaPredicted RBP4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 CDC42EP4Q9H3Q1 356 aaKnown RBP4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 ZNF107Q9UII5 783 aaPredicted RBP4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 WDR83OSQ9Y284 106 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 SLC35A3Q9Y2D2 325 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 PLXNA2O75051 1894 aa4.39□□□□□ -1.71
TRAPPC11-208ENST00000511955 ADAMTS9Q9P2N4 1935 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 PI4KAP42356 2102 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 LOC285095A0A1B0GVY8 99 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 TSPAN11A1L157 253 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 OR51F1A6NGY5 319 aa4.38□□□□□ -1.71
TRAPPC11-208ENST00000511955 FAM74A7A6NL05 159 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms