RNA–Protein interactions for RNA: ENST00000508580.1

DDX4-208, Transcript of DEAD-box helicase 4, human

TSL 2

Gene DDX4, Length 600 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX4-208	ENST00000508580	KLHDC3	Q9BQ90	382 aa		2.99	□□□□□ -1.93
DDX4-208	ENST00000508580	SRXN1	Q9BYN0	137 aa		2.99	□□□□□ -1.93
DDX4-208	ENST00000508580	REEP1	Q9H902	201 aa		2.99	□□□□□ -1.93
DDX4-208	ENST00000508580	RDH14	Q9HBH5	336 aa		2.99	□□□□□ -1.93
DDX4-208	ENST00000508580	ACOT13	Q9NPJ3	140 aa		2.99	□□□□□ -1.93
DDX4-208	ENST00000508580	EXD2	Q9NVH0	621 aa		2.99	□□□□□ -1.93
DDX4-208	ENST00000508580	FGFR1OP2	Q9NVK5	253 aa		2.99	□□□□□ -1.93
DDX4-208	ENST00000508580	KCNIP1	Q9NZI2	227 aa		2.99	□□□□□ -1.93
DDX4-208	ENST00000508580	WIF1	Q9Y5W5	379 aa		2.99	□□□□□ -1.93
DDX4-208	ENST00000508580	MTCH2	Q9Y6C9	303 aa		2.99	□□□□□ -1.93
DDX4-208	ENST00000508580	CARMIL3	Q8ND23	1372 aa		2.99	□□□□□ -1.93
DDX4-208	ENST00000508580	IGHV1OR21-1	A0A087WYE8	117 aa		2.98	□□□□□ -1.93
DDX4-208	ENST00000508580	KIR2DS1	A0A191URI9	304 aa		2.98	□□□□□ -1.93
DDX4-208	ENST00000508580		A0A1B0GUA9	196 aa		2.98	□□□□□ -1.93
DDX4-208	ENST00000508580	TEX48	A0A1B0GUV7	120 aa		2.98	□□□□□ -1.93
DDX4-208	ENST00000508580		A6NDN8	102 aa		2.98	□□□□□ -1.93
DDX4-208	ENST00000508580	ZNF233	A6NK53	670 aa		2.98	□□□□□ -1.93
DDX4-208	ENST00000508580		K7EQG2	157 aa		2.98	□□□□□ -1.93
DDX4-208	ENST00000508580	ZNF593	O00488	134 aa	Predicted RBP	2.98	□□□□□ -1.93
DDX4-208	ENST00000508580	MAGEB4	O15481	346 aa	Predicted RBP	2.98	□□□□□ -1.93
DDX4-208	ENST00000508580	NUPL2	O15504	423 aa	Known RBP	2.98	□□□□□ -1.93
DDX4-208	ENST00000508580	MPZL2	O60487	215 aa		2.98	□□□□□ -1.93
DDX4-208	ENST00000508580	SLC16A7	O60669	478 aa		2.98	□□□□□ -1.93
DDX4-208	ENST00000508580	SHOX2	O60902	331 aa	Predicted RBP	2.98	□□□□□ -1.93
DDX4-208	ENST00000508580	CIAO1	O76071	339 aa		2.98	□□□□□ -1.93
DDX4-208	ENST00000508580	HPRT1	P00492	218 aa		2.98	□□□□□ -1.93
DDX4-208	ENST00000508580	IL6	P05231	212 aa		2.98	□□□□□ -1.93
DDX4-208	ENST00000508580	LIMS3	P0CW19	117 aa		2.98	□□□□□ -1.93
DDX4-208	ENST00000508580	LIMS4	P0CW20	117 aa		2.98	□□□□□ -1.93
DDX4-208	ENST00000508580	GABRG2	P18507	467 aa		2.98	□□□□□ -1.93
DDX4-208	ENST00000508580	KRTAP5-9	P26371	169 aa		2.98	□□□□□ -1.93
DDX4-208	ENST00000508580	GTF2H1	P32780	548 aa		2.98	□□□□□ -1.93
DDX4-208	ENST00000508580	RAB7A	P51149	207 aa		2.98	□□□□□ -1.93
DDX4-208	ENST00000508580	FABP6	P51161	128 aa		2.98	□□□□□ -1.93
DDX4-208	ENST00000508580	CAV2	P51636	162 aa		2.98	□□□□□ -1.93
DDX4-208	ENST00000508580	STC1	P52823	247 aa		2.98	□□□□□ -1.93
DDX4-208	ENST00000508580	AP1S2	P56377	157 aa		2.98	□□□□□ -1.93
DDX4-208	ENST00000508580	SRPX	P78539	464 aa		2.98	□□□□□ -1.93
DDX4-208	ENST00000508580	CCL7	P80098	99 aa		2.98	□□□□□ -1.93
DDX4-208	ENST00000508580	CDC20	Q12834	499 aa		2.98	□□□□□ -1.93
DDX4-208	ENST00000508580	MLLT11	Q13015	90 aa	Predicted RBP	2.98	□□□□□ -1.93
DDX4-208	ENST00000508580	KIR2DS1	Q14954	304 aa		2.98	□□□□□ -1.93
DDX4-208	ENST00000508580	PDK2	Q15119	407 aa		2.98	□□□□□ -1.93
DDX4-208	ENST00000508580	OR7A5	Q15622	319 aa		2.98	□□□□□ -1.93
DDX4-208	ENST00000508580	CNPY1	Q3B7I2	92 aa		2.98	□□□□□ -1.93
DDX4-208	ENST00000508580	OR10J3	Q5JRS4	329 aa		2.98	□□□□□ -1.93
DDX4-208	ENST00000508580	KLF17	Q5JT82	389 aa	Predicted RBP	2.98	□□□□□ -1.93
DDX4-208	ENST00000508580	UBE2U	Q5VVX9	321 aa		2.98	□□□□□ -1.93
DDX4-208	ENST00000508580	SPINK14	Q6IE38	97 aa		2.98	□□□□□ -1.93
DDX4-208	ENST00000508580	ZNF613	Q6PF04	617 aa		2.98	□□□□□ -1.93
DDX4-208	ENST00000508580	C12orf54	Q6X4T0	127 aa		2.98	□□□□□ -1.93
DDX4-208	ENST00000508580	RTL4	Q6ZR62	310 aa		2.98	□□□□□ -1.93
DDX4-208	ENST00000508580	MBOAT2	Q6ZWT7	520 aa		2.98	□□□□□ -1.93
DDX4-208	ENST00000508580	ZFP82	Q8N141	532 aa		2.98	□□□□□ -1.93
DDX4-208	ENST00000508580	STPG2	Q8N412	459 aa		2.98	□□□□□ -1.93
DDX4-208	ENST00000508580	OR5B17	Q8NGF7	314 aa		2.98	□□□□□ -1.93
DDX4-208	ENST00000508580	OR5AR1	Q8NGP9	310 aa		2.98	□□□□□ -1.93
DDX4-208	ENST00000508580	OR10R2	Q8NGX6	335 aa		2.98	□□□□□ -1.93
DDX4-208	ENST00000508580	OR2AE1	Q8NHA4	323 aa		2.98	□□□□□ -1.93
DDX4-208	ENST00000508580	SYNPR	Q8TBG9	265 aa		2.98	□□□□□ -1.93
DDX4-208	ENST00000508580	FGF14	Q92915	247 aa		2.98	□□□□□ -1.93
DDX4-208	ENST00000508580	HGD	Q93099	445 aa		2.98	□□□□□ -1.93
DDX4-208	ENST00000508580	TMEM54	Q969K7	222 aa		2.98	□□□□□ -1.93
DDX4-208	ENST00000508580	PPWD1	Q96BP3	646 aa	Known RBP	2.98	□□□□□ -1.93
DDX4-208	ENST00000508580	SLC25A38	Q96DW6	304 aa		2.98	□□□□□ -1.93
DDX4-208	ENST00000508580	PIK3IP1	Q96FE7	263 aa		2.98	□□□□□ -1.93
DDX4-208	ENST00000508580	PGLYRP4	Q96LB8	373 aa		2.98	□□□□□ -1.93
DDX4-208	ENST00000508580	PSMB7	Q99436	277 aa		2.98	□□□□□ -1.93
DDX4-208	ENST00000508580	ATF6B	Q99941	703 aa		2.98	□□□□□ -1.93
DDX4-208	ENST00000508580	APOL4	Q9BPW4	351 aa		2.98	□□□□□ -1.93
DDX4-208	ENST00000508580	MRPS26	Q9BYN8	205 aa	Known RBP	2.98	□□□□□ -1.93
DDX4-208	ENST00000508580	NXF2	Q9GZY0	626 aa	Known RBP	2.98	□□□□□ -1.93
DDX4-208	ENST00000508580	RNF167	Q9H6Y7	350 aa		2.98	□□□□□ -1.93
DDX4-208	ENST00000508580	MED4	Q9NPJ6	270 aa		2.98	□□□□□ -1.93
DDX4-208	ENST00000508580	CES1P1	Q9UKY3	287 aa		2.98	□□□□□ -1.93
DDX4-208	ENST00000508580	SPATA2	Q9UM82	520 aa		2.98	□□□□□ -1.93
DDX4-208	ENST00000508580	GUCA1B	Q9UMX6	200 aa		2.98	□□□□□ -1.93
DDX4-208	ENST00000508580	ZNF256	Q9Y2P7	627 aa	Predicted RBP	2.98	□□□□□ -1.93
DDX4-208	ENST00000508580	KLF12	Q9Y4X4	402 aa		2.98	□□□□□ -1.93
DDX4-208	ENST00000508580	DICER1	Q9UPY3	1922 aa	Known RBP	2.97	□□□□□ -1.93
DDX4-208	ENST00000508580	MN1	Q10571	1320 aa	Predicted RBP	2.97	□□□□□ -1.93
DDX4-208	ENST00000508580	COL6A3	P12111	3177 aa		2.97	□□□□□ -1.93
DDX4-208	ENST00000508580	LTBP1	Q14766	1721 aa		2.97	□□□□□ -1.93
DDX4-208	ENST00000508580	TIAM2	Q8IVF5	1701 aa		2.97	□□□□□ -1.93
DDX4-208	ENST00000508580	KIR2DL5B	A0A0G2JN68	375 aa		2.97	□□□□□ -1.93
DDX4-208	ENST00000508580	KIR2DL5B	A0A0G2JPC4	375 aa		2.97	□□□□□ -1.93
DDX4-208	ENST00000508580	OR2AT4	A6NND4	320 aa		2.97	□□□□□ -1.93
DDX4-208	ENST00000508580	ERVV-1	B6SEH8	477 aa		2.97	□□□□□ -1.93
DDX4-208	ENST00000508580	ANKRD65	E5RJM6	399 aa		2.97	□□□□□ -1.93
DDX4-208	ENST00000508580		F5H768	121 aa		2.97	□□□□□ -1.93
DDX4-208	ENST00000508580		F6UB75	175 aa		2.97	□□□□□ -1.93
DDX4-208	ENST00000508580		H3BNH8	94 aa		2.97	□□□□□ -1.93
DDX4-208	ENST00000508580	SLC17A2	O00624	439 aa		2.97	□□□□□ -1.93
DDX4-208	ENST00000508580	CDIPT	O14735	213 aa		2.97	□□□□□ -1.93
DDX4-208	ENST00000508580	ACOX3	O15254	700 aa		2.97	□□□□□ -1.93
DDX4-208	ENST00000508580	TGOLN2	O43493	480 aa		2.97	□□□□□ -1.93
DDX4-208	ENST00000508580	DPM1	O60762	260 aa		2.97	□□□□□ -1.93
DDX4-208	ENST00000508580	DUS4L	O95620	317 aa	Known RBP	2.97	□□□□□ -1.93
DDX4-208	ENST00000508580	ATP6V1G2	O95670	118 aa		2.97	□□□□□ -1.93
DDX4-208	ENST00000508580	PTTG1	O95997	202 aa		2.97	□□□□□ -1.93

Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms