RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 DNAH7Q8WXX0 4024 aa2.52□□□□□ -2.01
TOPBP1-206ENST00000508524 PLCE1Q9P212 2302 aa2.52□□□□□ -2.01
TOPBP1-206ENST00000508524 A0A0J9YYE9 177 aa2.52□□□□□ -2.01
TOPBP1-206ENST00000508524 GABRR3A8MPY1 467 aa2.52□□□□□ -2.01
TOPBP1-206ENST00000508524 UGT1A9O60656 530 aa2.52□□□□□ -2.01
TOPBP1-206ENST00000508524 SCGB2A1O75556 95 aa2.52□□□□□ -2.01
TOPBP1-206ENST00000508524 PALMO75781 387 aa2.52□□□□□ -2.01
TOPBP1-206ENST00000508524 TRBC1P01850 177 aa2.52□□□□□ -2.01
TOPBP1-206ENST00000508524 PIRTP0C851 137 aa2.52□□□□□ -2.01
TOPBP1-206ENST00000508524 UGT2B7P16662 529 aa2.52□□□□□ -2.01
TOPBP1-206ENST00000508524 CMA1P23946 247 aa2.52□□□□□ -2.01
TOPBP1-206ENST00000508524 SPINT3P49223 89 aa2.52□□□□□ -2.01
TOPBP1-206ENST00000508524 VSX2P58304 361 aaPredicted RBP2.52□□□□□ -2.01
TOPBP1-206ENST00000508524 AP1S1P61966 158 aa2.52□□□□□ -2.01
TOPBP1-206ENST00000508524 HMGN5P82970 282 aaKnown RBP2.52□□□□□ -2.01
TOPBP1-206ENST00000508524 PJVKQ0ZLH3 352 aa2.52□□□□□ -2.01
TOPBP1-206ENST00000508524 GUCA2BQ16661 112 aa2.52□□□□□ -2.01
TOPBP1-206ENST00000508524 SLC25A25Q6KCM7 469 aa2.52□□□□□ -2.01
TOPBP1-206ENST00000508524 NLRP9Q7RTR0 991 aa2.52□□□□□ -2.01
TOPBP1-206ENST00000508524 SLC13A5Q86YT5 568 aaPredicted RBP2.52□□□□□ -2.01
TOPBP1-206ENST00000508524 CLEC4FQ8N1N0 589 aa2.52□□□□□ -2.01
TOPBP1-206ENST00000508524 KIF2BQ8N4N8 673 aa2.52□□□□□ -2.01
TOPBP1-206ENST00000508524 JOSD2Q8TAC2 188 aa2.52□□□□□ -2.01
TOPBP1-206ENST00000508524 SPRYD4Q8WW59 207 aaPredicted RBP2.52□□□□□ -2.01
TOPBP1-206ENST00000508524 RMI2Q96E14 147 aa2.52□□□□□ -2.01
TOPBP1-206ENST00000508524 C4orf36Q96KX1 117 aa2.52□□□□□ -2.01
TOPBP1-206ENST00000508524 CAPZA3Q96KX2 299 aa2.52□□□□□ -2.01
TOPBP1-206ENST00000508524 PSKH2Q96QS6 385 aa2.52□□□□□ -2.01
TOPBP1-206ENST00000508524 AP1M2Q9Y6Q5 423 aa2.52□□□□□ -2.01
TOPBP1-206ENST00000508524 IGLV3-12A0A075B6K2 115 aa2.51□□□□□ -2.01
TOPBP1-206ENST00000508524 C12orf71A8MTZ7 269 aa2.51□□□□□ -2.01
TOPBP1-206ENST00000508524 C12orf77C9JDV5 145 aa2.51□□□□□ -2.01
TOPBP1-206ENST00000508524 LOC110117498-PIK3R3F6TDL0 507 aa2.51□□□□□ -2.01
TOPBP1-206ENST00000508524 KMOO15229 486 aa2.51□□□□□ -2.01
TOPBP1-206ENST00000508524 POP7O75817 140 aaKnown RBP2.51□□□□□ -2.01
TOPBP1-206ENST00000508524 SLC25A14O95258 325 aaPredicted RBP2.51□□□□□ -2.01
TOPBP1-206ENST00000508524 UQCRHP07919 91 aa2.51□□□□□ -2.01
TOPBP1-206ENST00000508524 KRT13P13646 458 aa2.51□□□□□ -2.01
TOPBP1-206ENST00000508524 STMN1P16949 149 aa2.51□□□□□ -2.01
TOPBP1-206ENST00000508524 PBLDP30039 288 aaPredicted RBP2.51□□□□□ -2.01
TOPBP1-206ENST00000508524 P2RY1P47900 373 aa2.51□□□□□ -2.01
TOPBP1-206ENST00000508524 PKNOX1P55347 436 aa2.51□□□□□ -2.01
TOPBP1-206ENST00000508524 HMGCS1Q01581 520 aa2.51□□□□□ -2.01
TOPBP1-206ENST00000508524 XRCC4Q13426 336 aa2.51□□□□□ -2.01
TOPBP1-206ENST00000508524 SGCAQ16586 387 aa2.51□□□□□ -2.01
TOPBP1-206ENST00000508524 MICBQ29980 383 aa2.51□□□□□ -2.01
TOPBP1-206ENST00000508524 TMEM41BQ5BJD5 291 aa2.51□□□□□ -2.01
TOPBP1-206ENST00000508524 C1orf185Q5T7R7 199 aa2.51□□□□□ -2.01
TOPBP1-206ENST00000508524 RIPPLY2Q5TAB7 128 aa2.51□□□□□ -2.01
TOPBP1-206ENST00000508524 SPESP1Q6UW49 350 aa2.51□□□□□ -2.01
TOPBP1-206ENST00000508524 KDELC1Q6UW63 502 aa2.51□□□□□ -2.01
TOPBP1-206ENST00000508524 TMEM205Q6UW68 189 aa2.51□□□□□ -2.01
TOPBP1-206ENST00000508524 ABHD13Q7L211 337 aa2.51□□□□□ -2.01
TOPBP1-206ENST00000508524 TRAPPC5Q8IUR0 188 aa2.51□□□□□ -2.01
TOPBP1-206ENST00000508524 LIX1Q8N485 282 aa2.51□□□□□ -2.01
TOPBP1-206ENST00000508524 ZFP62Q8NB50 900 aaPredicted RBP2.51□□□□□ -2.01
TOPBP1-206ENST00000508524 ACOT11Q8WXI4 607 aaPredicted RBP2.51□□□□□ -2.01
TOPBP1-206ENST00000508524 RBMXL1Q96E39 390 aaKnown RBP2.51□□□□□ -2.01
TOPBP1-206ENST00000508524 PIK3IP1Q96FE7 263 aa2.51□□□□□ -2.01
TOPBP1-206ENST00000508524 ZNF396Q96N95 335 aaPredicted RBP2.51□□□□□ -2.01
TOPBP1-206ENST00000508524 UTP23Q9BRU9 249 aaKnown RBP2.51□□□□□ -2.01
TOPBP1-206ENST00000508524 ACTR6Q9GZN1 396 aa2.51□□□□□ -2.01
TOPBP1-206ENST00000508524 ETNK2Q9NVF9 386 aa2.51□□□□□ -2.01
TOPBP1-206ENST00000508524 EURLQ9NYK6 297 aa2.51□□□□□ -2.01
TOPBP1-206ENST00000508524 IL36GQ9NZH8 169 aa2.51□□□□□ -2.01
TOPBP1-206ENST00000508524 RPL36Q9Y3U8 105 aaKnown RBP2.51□□□□□ -2.01
TOPBP1-206ENST00000508524 C1orf232A0A0U1RR37 186 aa2.5□□□□□ -2.01
TOPBP1-206ENST00000508524 PVALEFA0A1B0GWK0 134 aa2.5□□□□□ -2.01
TOPBP1-206ENST00000508524 KRT87PA6NCN2 255 aa2.5□□□□□ -2.01
TOPBP1-206ENST00000508524 OR2AG2A6NM03 316 aa2.5□□□□□ -2.01
TOPBP1-206ENST00000508524 EEF1E1-BLOC1S5C9J1V9 151 aa2.5□□□□□ -2.01
TOPBP1-206ENST00000508524 EEF1E1O43324 174 aaKnown RBP2.5□□□□□ -2.01
TOPBP1-206ENST00000508524 TCF21O43680 179 aa2.5□□□□□ -2.01
TOPBP1-206ENST00000508524 CDK14O94921 469 aa2.5□□□□□ -2.01
TOPBP1-206ENST00000508524 GLSO94925 669 aaPredicted RBP2.5□□□□□ -2.01
TOPBP1-206ENST00000508524 OPN1MWP04001 364 aa2.5□□□□□ -2.01
TOPBP1-206ENST00000508524 SOD3P08294 240 aa2.5□□□□□ -2.01
TOPBP1-206ENST00000508524 OPN1MW2P0DN77 364 aa2.5□□□□□ -2.01
TOPBP1-206ENST00000508524 OPN1MW3P0DN78 364 aa2.5□□□□□ -2.01
TOPBP1-206ENST00000508524 RNASE2P10153 161 aaKnown RBP2.5□□□□□ -2.01
TOPBP1-206ENST00000508524 HPGDP15428 266 aa2.5□□□□□ -2.01
TOPBP1-206ENST00000508524 PGAM1P18669 254 aa2.5□□□□□ -2.01
TOPBP1-206ENST00000508524 NPY1RP25929 384 aa2.5□□□□□ -2.01
TOPBP1-206ENST00000508524 EMP2P54851 167 aa2.5□□□□□ -2.01
TOPBP1-206ENST00000508524 YWHAEP62258 255 aaKnown RBP2.5□□□□□ -2.01
TOPBP1-206ENST00000508524 ACTG1P63261 375 aa2.5□□□□□ -2.01
TOPBP1-206ENST00000508524 STK11Q15831 433 aa2.5□□□□□ -2.01
TOPBP1-206ENST00000508524 ZNF880Q6PDB4 577 aa2.5□□□□□ -2.01
TOPBP1-206ENST00000508524 PGAM4Q8N0Y7 254 aa2.5□□□□□ -2.01
TOPBP1-206ENST00000508524 C15orf56Q8N910 161 aa2.5□□□□□ -2.01
TOPBP1-206ENST00000508524 ACTRT1Q8TDG2 376 aa2.5□□□□□ -2.01
TOPBP1-206ENST00000508524 CD300LFQ8TDQ1 290 aa2.5□□□□□ -2.01
TOPBP1-206ENST00000508524 LCN9Q8WX39 176 aa2.5□□□□□ -2.01
TOPBP1-206ENST00000508524 RXFP2Q8WXD0 754 aa2.5□□□□□ -2.01
TOPBP1-206ENST00000508524 SH3YL1Q96HL8 342 aaPredicted RBP2.5□□□□□ -2.01
TOPBP1-206ENST00000508524 WFIKKN1Q96NZ8 548 aa2.5□□□□□ -2.01
TOPBP1-206ENST00000508524 OSBPL11Q9BXB4 747 aa2.5□□□□□ -2.01
TOPBP1-206ENST00000508524 ANGPTL4Q9BY76 406 aa2.5□□□□□ -2.01
TOPBP1-206ENST00000508524 ULBP2Q9BZM5 246 aa2.5□□□□□ -2.01
TOPBP1-206ENST00000508524 TRIM45Q9H8W5 580 aaPredicted RBP2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms