RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 PET100P0DJ07 73 aa11.84□□□□□ -0.51
SNCAIP-209ENST00000508017 ZNF44P15621 663 aa11.84□□□□□ -0.51
SNCAIP-209ENST00000508017 DLX2Q07687 328 aaPredicted RBP11.84□□□□□ -0.51
SNCAIP-209ENST00000508017 C5orf46Q6UWT4 87 aa11.84□□□□□ -0.51
SNCAIP-209ENST00000508017 C7orf61Q8IZ16 206 aa11.84□□□□□ -0.51
SNCAIP-209ENST00000508017 OR51T1Q8NGJ9 327 aa11.84□□□□□ -0.51
SNCAIP-209ENST00000508017 OR1L3Q8NH93 324 aa11.84□□□□□ -0.51
SNCAIP-209ENST00000508017 TMEM234Q8WY98 164 aa11.84□□□□□ -0.51
SNCAIP-209ENST00000508017 RPS10P5Q9NQ39 176 aa11.84□□□□□ -0.51
SNCAIP-209ENST00000508017 SERINC1Q9NRX5 453 aa11.84□□□□□ -0.51
SNCAIP-209ENST00000508017 IGKV1D-8A0A087WSZ0 117 aa11.83□□□□□ -0.52
SNCAIP-209ENST00000508017 ZNF878C9JN71 531 aa11.83□□□□□ -0.52
SNCAIP-209ENST00000508017 RER1O15258 196 aa11.83□□□□□ -0.52
SNCAIP-209ENST00000508017 SGCEO43556 437 aa11.83□□□□□ -0.52
SNCAIP-209ENST00000508017 EFNA2O43921 213 aa11.83□□□□□ -0.52
SNCAIP-209ENST00000508017 GIMD1P0DJR0 217 aa11.83□□□□□ -0.52
SNCAIP-209ENST00000508017 FBLP22087 321 aaKnown RBP11.83□□□□□ -0.52
SNCAIP-209ENST00000508017 RPL12P30050 165 aaKnown RBP11.83□□□□□ -0.52
SNCAIP-209ENST00000508017 FCGR2CP31995 323 aa11.83□□□□□ -0.52
SNCAIP-209ENST00000508017 DVL1P1P54792 670 aaPredicted RBP11.83□□□□□ -0.52
SNCAIP-209ENST00000508017 HSD11B2P80365 405 aa11.83□□□□□ -0.52
SNCAIP-209ENST00000508017 ACY1Q03154 408 aa11.83□□□□□ -0.52
SNCAIP-209ENST00000508017 IAH1Q2TAA2 248 aaPredicted RBP11.83□□□□□ -0.52
SNCAIP-209ENST00000508017 CARD17Q5XLA6 110 aa11.83□□□□□ -0.52
SNCAIP-209ENST00000508017 TMPRSS9Q7Z410 1059 aa11.83□□□□□ -0.52
SNCAIP-209ENST00000508017 OR56B1Q8NGI3 324 aa11.83□□□□□ -0.52
SNCAIP-209ENST00000508017 RLN3Q8WXF3 142 aa11.83□□□□□ -0.52
SNCAIP-209ENST00000508017 CNTNAP3Q9BZ76 1288 aa11.83□□□□□ -0.52
SNCAIP-209ENST00000508017 OR10A2Q9H208 303 aa11.83□□□□□ -0.52
SNCAIP-209ENST00000508017 PARP11Q9NR21 331 aa11.83□□□□□ -0.52
SNCAIP-209ENST00000508017 KLHL13Q9P2N7 655 aa11.83□□□□□ -0.52
SNCAIP-209ENST00000508017 ASH2LQ9UBL3 628 aa11.83□□□□□ -0.52
SNCAIP-209ENST00000508017 CD207Q9UJ71 328 aa11.83□□□□□ -0.52
SNCAIP-209ENST00000508017 B3GALT5Q9Y2C3 310 aa11.83□□□□□ -0.52
SNCAIP-209ENST00000508017 UNC13CQ8NB66 2214 aa11.83□□□□□ -0.52
SNCAIP-209ENST00000508017 RALGAPA1Q6GYQ0 2036 aa11.82□□□□□ -0.52
SNCAIP-209ENST00000508017 ANKUB1A6NFN9 424 aa11.82□□□□□ -0.52
SNCAIP-209ENST00000508017 C5orf52A6NGY3 159 aa11.82□□□□□ -0.52
SNCAIP-209ENST00000508017 LILRA5A6NI73 299 aa11.82□□□□□ -0.52
SNCAIP-209ENST00000508017 LIPT2A6NK58 231 aa11.82□□□□□ -0.52
SNCAIP-209ENST00000508017 CST4P01036 141 aa11.82□□□□□ -0.52
SNCAIP-209ENST00000508017 HPNP05981 417 aa11.82□□□□□ -0.52
SNCAIP-209ENST00000508017 CCR5P51681 352 aa11.82□□□□□ -0.52
SNCAIP-209ENST00000508017 DEFB133Q30KQ1 61 aa11.82□□□□□ -0.52
SNCAIP-209ENST00000508017 EIF5AL1Q6IS14 154 aaKnown RBP11.82□□□□□ -0.52
SNCAIP-209ENST00000508017 FAM57BQ71RH2 274 aa11.82□□□□□ -0.52
SNCAIP-209ENST00000508017 ISOC2Q96AB3 205 aa11.82□□□□□ -0.52
SNCAIP-209ENST00000508017 BSCL2Q96G97 398 aaPredicted RBP11.82□□□□□ -0.52
SNCAIP-209ENST00000508017 LIN37Q96GY3 246 aaPredicted RBP11.82□□□□□ -0.52
SNCAIP-209ENST00000508017 SCGB3A2Q96PL1 93 aa11.82□□□□□ -0.52
SNCAIP-209ENST00000508017 MRPL13Q9BYD1 178 aaKnown RBP11.82□□□□□ -0.52
SNCAIP-209ENST00000508017 EGLN1Q9GZT9 426 aa11.82□□□□□ -0.52
SNCAIP-209ENST00000508017 MMP17Q9ULZ9 603 aa11.82□□□□□ -0.52
SNCAIP-209ENST00000508017 NCOA6Q14686 2063 aaPredicted RBP11.82□□□□□ -0.52
SNCAIP-209ENST00000508017 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.82□□□□□ -0.52
SNCAIP-209ENST00000508017 A6NLC8 198 aa11.82□□□□□ -0.52
SNCAIP-209ENST00000508017 C1orf196B1AJZ1 125 aa11.82□□□□□ -0.52
SNCAIP-209ENST00000508017 K7EPK0 472 aa11.82□□□□□ -0.52
SNCAIP-209ENST00000508017 TAAR5O14804 337 aa11.82□□□□□ -0.52
SNCAIP-209ENST00000508017 ZNF806P0C7X5 589 aa11.82□□□□□ -0.52
SNCAIP-209ENST00000508017 DAOP14920 347 aa11.82□□□□□ -0.52
SNCAIP-209ENST00000508017 EIF5AP63241 154 aaKnown RBP11.82□□□□□ -0.52
SNCAIP-209ENST00000508017 SMCO1Q147U7 214 aa11.82□□□□□ -0.52
SNCAIP-209ENST00000508017 CRIP3Q6Q6R5 217 aa11.82□□□□□ -0.52
SNCAIP-209ENST00000508017 GKN2Q86XP6 184 aa11.82□□□□□ -0.52
SNCAIP-209ENST00000508017 FAM71E2Q8N5Q1 922 aa11.82□□□□□ -0.52
SNCAIP-209ENST00000508017 C15orf54Q8N8G6 183 aa11.82□□□□□ -0.52
SNCAIP-209ENST00000508017 ST8SIA1Q92185 356 aa11.82□□□□□ -0.52
SNCAIP-209ENST00000508017 OR5B2Q96R09 309 aa11.82□□□□□ -0.52
SNCAIP-209ENST00000508017 C20orf24Q9BUV8 137 aa11.82□□□□□ -0.52
SNCAIP-209ENST00000508017 TIMM10BQ9Y5J6 103 aa11.82□□□□□ -0.52
SNCAIP-209ENST00000508017 NPIPB13A6NJU9 1138 aa11.81□□□□□ -0.52
SNCAIP-209ENST00000508017 NPIPB4C9JG80 1138 aa11.81□□□□□ -0.52
SNCAIP-209ENST00000508017 SNRNP70P08621 437 aaKnown RBP11.81□□□□□ -0.52
SNCAIP-209ENST00000508017 ADH6P28332 368 aa11.81□□□□□ -0.52
SNCAIP-209ENST00000508017 BLVRBP30043 206 aaPredicted RBP11.81□□□□□ -0.52
SNCAIP-209ENST00000508017 TMEM33P57088 247 aa11.81□□□□□ -0.52
SNCAIP-209ENST00000508017 CLRN1P58418 232 aa11.81□□□□□ -0.52
SNCAIP-209ENST00000508017 RNF4P78317 190 aa11.81□□□□□ -0.52
SNCAIP-209ENST00000508017 EIF2S3LQ2VIR3 472 aaKnown RBP11.81□□□□□ -0.52
SNCAIP-209ENST00000508017 AWAT1Q58HT5 328 aa11.81□□□□□ -0.52
SNCAIP-209ENST00000508017 LCN10Q6JVE6 187 aa11.81□□□□□ -0.52
SNCAIP-209ENST00000508017 Q6ZS52 159 aa11.81□□□□□ -0.52
SNCAIP-209ENST00000508017 OR2AJ1Q8NGZ0 328 aa11.81□□□□□ -0.52
SNCAIP-209ENST00000508017 OR6S1Q8NH40 331 aa11.81□□□□□ -0.52
SNCAIP-209ENST00000508017 RHBDD1Q8TEB9 315 aa11.81□□□□□ -0.52
SNCAIP-209ENST00000508017 ERGIC1Q969X5 290 aa11.81□□□□□ -0.52
SNCAIP-209ENST00000508017 IP6K3Q96PC2 410 aa11.81□□□□□ -0.52
SNCAIP-209ENST00000508017 URM1Q9BTM9 101 aaKnown RBP11.81□□□□□ -0.52
SNCAIP-209ENST00000508017 TMEM106CQ9BVX2 250 aa11.81□□□□□ -0.52
SNCAIP-209ENST00000508017 RPH3AQ9Y2J0 694 aaPredicted RBP11.81□□□□□ -0.52
SNCAIP-209ENST00000508017 AMDHD2Q9Y303 409 aa11.81□□□□□ -0.52
SNCAIP-209ENST00000508017 LSM5Q9Y4Y9 91 aaKnown RBP11.81□□□□□ -0.52
SNCAIP-209ENST00000508017 BRWD1Q9NSI6 2320 aa11.81□□□□□ -0.52
SNCAIP-209ENST00000508017 A0A1W2PPC4 97 aa11.81□□□□□ -0.52
SNCAIP-209ENST00000508017 FIGNL2A6NMB9 653 aa11.81□□□□□ -0.52
SNCAIP-209ENST00000508017 NME2P1O60361 137 aa11.81□□□□□ -0.52
SNCAIP-209ENST00000508017 SCGB1D2O95969 90 aa11.81□□□□□ -0.52
SNCAIP-209ENST00000508017 IFNA2P01563 188 aa11.81□□□□□ -0.52
SNCAIP-209ENST00000508017 FABP1P07148 127 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms