RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 DOK3Q7L591 496 aa15.29■□□□□ 0.04
NPHP4-210ENST00000506941 RDH10Q8IZV5 341 aa15.29■□□□□ 0.04
NPHP4-210ENST00000506941 BPIFB6Q8NFQ5 453 aa15.29■□□□□ 0.04
NPHP4-210ENST00000506941 OR5P3Q8WZ94 311 aa15.29■□□□□ 0.04
NPHP4-210ENST00000506941 ITFG2Q969R8 447 aa15.29■□□□□ 0.04
NPHP4-210ENST00000506941 ANKRD60Q9BZ19 345 aa15.29■□□□□ 0.04
NPHP4-210ENST00000506941 C14orf119Q9NWQ9 140 aa15.29■□□□□ 0.04
NPHP4-210ENST00000506941 CLEC2DQ9UHP7 191 aa15.29■□□□□ 0.04
NPHP4-210ENST00000506941 PSORS1C1Q9UIG5 152 aa15.29■□□□□ 0.04
NPHP4-210ENST00000506941 HIVEP2P31629 2446 aa15.28■□□□□ 0.04
NPHP4-210ENST00000506941 IRGMA1A4Y4 181 aa15.28■□□□□ 0.04
NPHP4-210ENST00000506941 A6NIN4 97 aa15.28■□□□□ 0.04
NPHP4-210ENST00000506941 OR4C45A6NMZ5 311 aa15.28■□□□□ 0.04
NPHP4-210ENST00000506941 IFNL4K9M1U5 179 aa15.28■□□□□ 0.04
NPHP4-210ENST00000506941 CD5LO43866 347 aa15.28■□□□□ 0.04
NPHP4-210ENST00000506941 MTRF1O75570 445 aaKnown RBP15.28■□□□□ 0.04
NPHP4-210ENST00000506941 ZNF205O95201 554 aa15.28■□□□□ 0.04
NPHP4-210ENST00000506941 UBCP0CG48 685 aaKnown RBP15.28■□□□□ 0.04
NPHP4-210ENST00000506941 ZNF16P17020 682 aaPredicted RBP15.28■□□□□ 0.04
NPHP4-210ENST00000506941 VHLP40337 213 aa15.28■□□□□ 0.04
NPHP4-210ENST00000506941 BTG1P62324 171 aa15.28■□□□□ 0.04
NPHP4-210ENST00000506941 CSNK2BP67870 215 aa15.28■□□□□ 0.04
NPHP4-210ENST00000506941 FAM201AQ5SY85 155 aa15.28■□□□□ 0.04
NPHP4-210ENST00000506941 OR2G6Q5TZ20 316 aa15.28■□□□□ 0.04
NPHP4-210ENST00000506941 ZNF826PQ6ZT77 177 aa15.28■□□□□ 0.04
NPHP4-210ENST00000506941 AHSA2Q719I0 299 aa15.28■□□□□ 0.04
NPHP4-210ENST00000506941 EGFL6Q8IUX8 553 aa15.28■□□□□ 0.04
NPHP4-210ENST00000506941 C11orf53Q8IXP5 236 aa15.28■□□□□ 0.04
NPHP4-210ENST00000506941 ZDHHC23Q8IYP9 409 aa15.28■□□□□ 0.04
NPHP4-210ENST00000506941 OR1M1Q8NGA1 313 aa15.28■□□□□ 0.04
NPHP4-210ENST00000506941 HPS1Q92902 700 aa15.28■□□□□ 0.04
NPHP4-210ENST00000506941 ERGIC1Q969X5 290 aa15.28■□□□□ 0.04
NPHP4-210ENST00000506941 TMEM80Q96HE8 168 aa15.28■□□□□ 0.04
NPHP4-210ENST00000506941 FN3KRPQ9HA64 309 aa15.28■□□□□ 0.04
NPHP4-210ENST00000506941 FKBP14Q9NWM8 211 aa15.28■□□□□ 0.04
NPHP4-210ENST00000506941 CNOT2Q9NZN8 540 aaKnown RBP15.28■□□□□ 0.04
NPHP4-210ENST00000506941 ENPP5Q9UJA9 477 aa15.28■□□□□ 0.04
NPHP4-210ENST00000506941 ZFHX3Q15911 3703 aa15.28■□□□□ 0.04
NPHP4-210ENST00000506941 SVEP1Q4LDE5 3571 aa15.28■□□□□ 0.04
NPHP4-210ENST00000506941 WNK2Q9Y3S1 2297 aa15.28■□□□□ 0.04
NPHP4-210ENST00000506941 A0A1B0GVI7 797 aa15.27■□□□□ 0.04
NPHP4-210ENST00000506941 ISPDA4D126 451 aa15.27■□□□□ 0.04
NPHP4-210ENST00000506941 EFCAB10A6NFE3 127 aa15.27■□□□□ 0.04
NPHP4-210ENST00000506941 ANXA2P2A6NMY6 339 aa15.27■□□□□ 0.04
NPHP4-210ENST00000506941 DHRS7CA6NNS2 312 aa15.27■□□□□ 0.04
NPHP4-210ENST00000506941 SYT7O43581 403 aa15.27■□□□□ 0.04
NPHP4-210ENST00000506941 HSPA13P48723 471 aa15.27■□□□□ 0.04
NPHP4-210ENST00000506941 CCR9P51686 369 aa15.27■□□□□ 0.04
NPHP4-210ENST00000506941 MZT1Q08AG7 82 aa15.27■□□□□ 0.04
NPHP4-210ENST00000506941 ZNF154Q13106 437 aa15.27■□□□□ 0.04
NPHP4-210ENST00000506941 ALKBH1Q13686 389 aaKnown RBP15.27■□□□□ 0.04
NPHP4-210ENST00000506941 CEP78Q5JTW2 689 aa15.27■□□□□ 0.04
NPHP4-210ENST00000506941 C6orf141Q5SZD1 244 aa15.27■□□□□ 0.04
NPHP4-210ENST00000506941 TMEM42Q69YG0 159 aa15.27■□□□□ 0.04
NPHP4-210ENST00000506941 XAF1Q6GPH4 301 aa15.27■□□□□ 0.04
NPHP4-210ENST00000506941 PEG10Q86TG7 708 aaKnown RBP15.27■□□□□ 0.04
NPHP4-210ENST00000506941 OR10AC1Q8NH08 325 aa15.27■□□□□ 0.04
NPHP4-210ENST00000506941 MSI2Q96DH6 328 aaKnown RBP15.27■□□□□ 0.04
NPHP4-210ENST00000506941 C1orf159Q96HA4 380 aa15.27■□□□□ 0.04
NPHP4-210ENST00000506941 MYCBPQ99417 103 aaPredicted RBP15.27■□□□□ 0.04
NPHP4-210ENST00000506941 MICU1Q9BPX6 476 aa15.27■□□□□ 0.04
NPHP4-210ENST00000506941 RTL8AQ9BWD3 113 aa15.27■□□□□ 0.04
NPHP4-210ENST00000506941 ABCB9Q9NP78 766 aa15.27■□□□□ 0.04
NPHP4-210ENST00000506941 C1orf123Q9NWV4 160 aa15.27■□□□□ 0.04
NPHP4-210ENST00000506941 CAB39Q9Y376 341 aaPredicted RBP15.27■□□□□ 0.04
NPHP4-210ENST00000506941 EXOSC1Q9Y3B2 195 aaKnown RBP15.27■□□□□ 0.04
NPHP4-210ENST00000506941 A6NLC8 198 aa15.26■□□□□ 0.03
NPHP4-210ENST00000506941 LRRC30A6NM36 301 aa15.26■□□□□ 0.03
NPHP4-210ENST00000506941 FAM157AC9JC47 383 aa15.26■□□□□ 0.03
NPHP4-210ENST00000506941 SLC1A7O00341 560 aa15.26■□□□□ 0.03
NPHP4-210ENST00000506941 IGHV2-5P01817 119 aa15.26■□□□□ 0.03
NPHP4-210ENST00000506941 ISG15P05161 165 aa15.26■□□□□ 0.03
NPHP4-210ENST00000506941 GZMKP49863 264 aa15.26■□□□□ 0.03
NPHP4-210ENST00000506941 GTF2A1P52655 376 aaPredicted RBP15.26■□□□□ 0.03
NPHP4-210ENST00000506941 LRRC28Q86X40 367 aaPredicted RBP15.26■□□□□ 0.03
NPHP4-210ENST00000506941 OR11L1Q8NGX0 322 aa15.26■□□□□ 0.03
NPHP4-210ENST00000506941 GAL3ST1Q99999 423 aa15.26■□□□□ 0.03
NPHP4-210ENST00000506941 TLNRD1Q9H1K6 362 aa15.26■□□□□ 0.03
NPHP4-210ENST00000506941 ZNF665Q9H7R5 613 aa15.26■□□□□ 0.03
NPHP4-210ENST00000506941 GPR173Q9NS66 373 aa15.26■□□□□ 0.03
NPHP4-210ENST00000506941 PCDHGB5Q9Y5G0 923 aa15.26■□□□□ 0.03
NPHP4-210ENST00000506941 NRASP01111 189 aa15.25■□□□□ 0.03
NPHP4-210ENST00000506941 MYL12AP19105 171 aa15.25■□□□□ 0.03
NPHP4-210ENST00000506941 C21orf33P30042 268 aaPredicted RBP15.25■□□□□ 0.03
NPHP4-210ENST00000506941 TGM4P49221 684 aa15.25■□□□□ 0.03
NPHP4-210ENST00000506941 GPM6AP51674 278 aa15.25■□□□□ 0.03
NPHP4-210ENST00000506941 GBX2P52951 348 aaPredicted RBP15.25■□□□□ 0.03
NPHP4-210ENST00000506941 CEACAM21Q3KPI0 293 aa15.25■□□□□ 0.03
NPHP4-210ENST00000506941 FAM76BQ5HYJ3 339 aa15.25■□□□□ 0.03
NPHP4-210ENST00000506941 CLVS2Q5SYC1 327 aa15.25■□□□□ 0.03
NPHP4-210ENST00000506941 TMEM244Q5VVB8 128 aa15.25■□□□□ 0.03
NPHP4-210ENST00000506941 PLCXD3Q63HM9 321 aa15.25■□□□□ 0.03
NPHP4-210ENST00000506941 CYB5R2Q6BCY4 276 aa15.25■□□□□ 0.03
NPHP4-210ENST00000506941 MOB3CQ70IA8 216 aa15.25■□□□□ 0.03
NPHP4-210ENST00000506941 KLHL36Q8N4N3 616 aa15.25■□□□□ 0.03
NPHP4-210ENST00000506941 ZNF485Q8NCK3 441 aa15.25■□□□□ 0.03
NPHP4-210ENST00000506941 C19orf18Q8NEA5 215 aa15.25■□□□□ 0.03
NPHP4-210ENST00000506941 OR51A4Q8NGJ6 313 aa15.25■□□□□ 0.03
NPHP4-210ENST00000506941 SGCDQ92629 289 aa15.25■□□□□ 0.03
NPHP4-210ENST00000506941 RNF170Q96K19 258 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms