RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 SUMF2Q8NBJ7 301 aa2.26□□□□□ -2.05
TRAPPC11-205ENST00000506426 INO80EQ8NBZ0 244 aaPredicted RBP2.26□□□□□ -2.05
TRAPPC11-205ENST00000506426 PROKR2Q8NFJ6 384 aa2.26□□□□□ -2.05
TRAPPC11-205ENST00000506426 NPBQ8NG41 125 aa2.26□□□□□ -2.05
TRAPPC11-205ENST00000506426 OR5T3Q8NGG3 340 aa2.26□□□□□ -2.05
TRAPPC11-205ENST00000506426 OR2A1Q8NGT9 310 aa2.26□□□□□ -2.05
TRAPPC11-205ENST00000506426 OR6X1Q8NH79 312 aa2.26□□□□□ -2.05
TRAPPC11-205ENST00000506426 NUBPLQ8TB37 319 aa2.26□□□□□ -2.05
TRAPPC11-205ENST00000506426 CA5BP1Q8WTZ4 195 aa2.26□□□□□ -2.05
TRAPPC11-205ENST00000506426 FAM3DQ96BQ1 224 aa2.26□□□□□ -2.05
TRAPPC11-205ENST00000506426 OTUB2Q96DC9 234 aa2.26□□□□□ -2.05
TRAPPC11-205ENST00000506426 CERS2Q96G23 380 aa2.26□□□□□ -2.05
TRAPPC11-205ENST00000506426 SLC35E1Q96K37 410 aa2.26□□□□□ -2.05
TRAPPC11-205ENST00000506426 C9orf72Q96LT7 481 aa2.26□□□□□ -2.05
TRAPPC11-205ENST00000506426 TSSK3Q96PN8 268 aa2.26□□□□□ -2.05
TRAPPC11-205ENST00000506426 TRIM4Q9C037 500 aa2.26□□□□□ -2.05
TRAPPC11-205ENST00000506426 FBXO44Q9H4M3 255 aa2.26□□□□□ -2.05
TRAPPC11-205ENST00000506426 NANOGQ9H9S0 305 aa2.26□□□□□ -2.05
TRAPPC11-205ENST00000506426 BEX1Q9HBH7 125 aa2.26□□□□□ -2.05
TRAPPC11-205ENST00000506426 CSNK1G1Q9HCP0 422 aa2.26□□□□□ -2.05
TRAPPC11-205ENST00000506426 ACP6Q9NPH0 428 aa2.26□□□□□ -2.05
TRAPPC11-205ENST00000506426 PRSS16Q9NQE7 514 aa2.26□□□□□ -2.05
TRAPPC11-205ENST00000506426 ZC4H2Q9NQZ6 224 aa2.26□□□□□ -2.05
TRAPPC11-205ENST00000506426 DYRK4Q9NR20 520 aa2.26□□□□□ -2.05
TRAPPC11-205ENST00000506426 MMP26Q9NRE1 261 aa2.26□□□□□ -2.05
TRAPPC11-205ENST00000506426 TUBG2Q9NRH3 451 aa2.26□□□□□ -2.05
TRAPPC11-205ENST00000506426 AGPAT4Q9NRZ5 378 aa2.26□□□□□ -2.05
TRAPPC11-205ENST00000506426 CISHQ9NSE2 258 aa2.26□□□□□ -2.05
TRAPPC11-205ENST00000506426 SLC25A37Q9NYZ2 338 aa2.26□□□□□ -2.05
TRAPPC11-205ENST00000506426 IL37Q9NZH6 218 aa2.26□□□□□ -2.05
TRAPPC11-205ENST00000506426 STOX2Q9P2F5 926 aaPredicted RBP2.26□□□□□ -2.05
TRAPPC11-205ENST00000506426 PCYOX1Q9UHG3 505 aa2.26□□□□□ -2.05
TRAPPC11-205ENST00000506426 GGA2Q9UJY4 613 aa2.26□□□□□ -2.05
TRAPPC11-205ENST00000506426 EML5Q05BV3 1969 aa2.26□□□□□ -2.05
TRAPPC11-205ENST00000506426 TRIP11Q15643 1979 aa2.26□□□□□ -2.05
TRAPPC11-205ENST00000506426 GREB1Q4ZG55 1949 aa2.26□□□□□ -2.05
TRAPPC11-205ENST00000506426 ASCC3Q8N3C0 2202 aaKnown RBP2.26□□□□□ -2.05
TRAPPC11-205ENST00000506426 ANK1P16157 1881 aa2.26□□□□□ -2.05
TRAPPC11-205ENST00000506426 TDRD6O60522 2096 aaKnown RBP2.26□□□□□ -2.05
TRAPPC11-205ENST00000506426 ATG2BQ96BY7 2078 aa2.26□□□□□ -2.05
TRAPPC11-205ENST00000506426 MYO16Q9Y6X6 1858 aa2.25□□□□□ -2.05
TRAPPC11-205ENST00000506426 TSPAN11A1L157 253 aa2.25□□□□□ -2.05
TRAPPC11-205ENST00000506426 PRSS37A4D1T9 235 aa2.25□□□□□ -2.05
TRAPPC11-205ENST00000506426 GABRR3A8MPY1 467 aa2.25□□□□□ -2.05
TRAPPC11-205ENST00000506426 PES1O00541 588 aaKnown RBP2.25□□□□□ -2.05
TRAPPC11-205ENST00000506426 KMOO15229 486 aa2.25□□□□□ -2.05
TRAPPC11-205ENST00000506426 NUPL2O15504 423 aaKnown RBP2.25□□□□□ -2.05
TRAPPC11-205ENST00000506426 SPOPO43791 374 aa2.25□□□□□ -2.05
TRAPPC11-205ENST00000506426 CALUO43852 315 aaPredicted RBP2.25□□□□□ -2.05
TRAPPC11-205ENST00000506426 YEATS4O95619 227 aa2.25□□□□□ -2.05
TRAPPC11-205ENST00000506426 RAB3DO95716 219 aa2.25□□□□□ -2.05
TRAPPC11-205ENST00000506426 MOSP00540 346 aa2.25□□□□□ -2.05
TRAPPC11-205ENST00000506426 INSP01308 110 aa2.25□□□□□ -2.05
TRAPPC11-205ENST00000506426 IGLV3-19P01714 112 aa2.25□□□□□ -2.05
TRAPPC11-205ENST00000506426 HBE1P02100 147 aa2.25□□□□□ -2.05
TRAPPC11-205ENST00000506426 PNMA6AP0CW24 399 aaPredicted RBP2.25□□□□□ -2.05
TRAPPC11-205ENST00000506426 CT45A6P0DMU7 189 aa2.25□□□□□ -2.05
TRAPPC11-205ENST00000506426 CT45A5P0DMU8 189 aa2.25□□□□□ -2.05
TRAPPC11-205ENST00000506426 CT45A7P0DMV0 189 aa2.25□□□□□ -2.05
TRAPPC11-205ENST00000506426 CTRB1P17538 263 aa2.25□□□□□ -2.05
TRAPPC11-205ENST00000506426 CNR1P21554 472 aa2.25□□□□□ -2.05
TRAPPC11-205ENST00000506426 CPN2P22792 545 aa2.25□□□□□ -2.05
TRAPPC11-205ENST00000506426 F2RP25116 425 aa2.25□□□□□ -2.05
TRAPPC11-205ENST00000506426 CD82P27701 267 aa2.25□□□□□ -2.05
TRAPPC11-205ENST00000506426 NUDT1P36639 197 aa2.25□□□□□ -2.05
TRAPPC11-205ENST00000506426 CTRLP40313 264 aa2.25□□□□□ -2.05
TRAPPC11-205ENST00000506426 CSKP41240 450 aa2.25□□□□□ -2.05
TRAPPC11-205ENST00000506426 NDUFA8P51970 172 aa2.25□□□□□ -2.05
TRAPPC11-205ENST00000506426 CARD18P57730 90 aa2.25□□□□□ -2.05
TRAPPC11-205ENST00000506426 UBE2MP61081 183 aaKnown RBP2.25□□□□□ -2.05
TRAPPC11-205ENST00000506426 MXD1Q05195 221 aa2.25□□□□□ -2.05
TRAPPC11-205ENST00000506426 SRSF6Q13247 344 aaKnown RBP2.25□□□□□ -2.05
TRAPPC11-205ENST00000506426 TMED1Q13445 227 aa2.25□□□□□ -2.05
TRAPPC11-205ENST00000506426 PNOCQ13519 176 aa2.25□□□□□ -2.05
TRAPPC11-205ENST00000506426 CST6Q15828 149 aa2.25□□□□□ -2.05
TRAPPC11-205ENST00000506426 GUCA2BQ16661 112 aa2.25□□□□□ -2.05
TRAPPC11-205ENST00000506426 ZCWPW2Q504Y3 356 aa2.25□□□□□ -2.05
TRAPPC11-205ENST00000506426 HSP90AA4PQ58FG1 418 aa2.25□□□□□ -2.05
TRAPPC11-205ENST00000506426 CT45A1Q5HYN5 189 aa2.25□□□□□ -2.05
TRAPPC11-205ENST00000506426 H3F3CQ6NXT2 135 aa2.25□□□□□ -2.05
TRAPPC11-205ENST00000506426 ACP7Q6ZNF0 438 aa2.25□□□□□ -2.05
TRAPPC11-205ENST00000506426 LINC00173Q6ZV60 143 aa2.25□□□□□ -2.05
TRAPPC11-205ENST00000506426 TAC4Q86UU9 113 aa2.25□□□□□ -2.05
TRAPPC11-205ENST00000506426 UNC93AQ86WB7 457 aa2.25□□□□□ -2.05
TRAPPC11-205ENST00000506426 STK40Q8N2I9 435 aa2.25□□□□□ -2.05
TRAPPC11-205ENST00000506426 OR56A4Q8NGH8 313 aa2.25□□□□□ -2.05
TRAPPC11-205ENST00000506426 CT45A3Q8NHU0 189 aa2.25□□□□□ -2.05
TRAPPC11-205ENST00000506426 LKAAEAR1Q8TD35 194 aa2.25□□□□□ -2.05
TRAPPC11-205ENST00000506426 MITD1Q8WV92 249 aa2.25□□□□□ -2.05
TRAPPC11-205ENST00000506426 GIMAP1Q8WWP7 306 aa2.25□□□□□ -2.05
TRAPPC11-205ENST00000506426 KLK6Q92876 244 aa2.25□□□□□ -2.05
TRAPPC11-205ENST00000506426 PHYHIPLQ96FC7 376 aa2.25□□□□□ -2.05
TRAPPC11-205ENST00000506426 ZNF396Q96N95 335 aaPredicted RBP2.25□□□□□ -2.05
TRAPPC11-205ENST00000506426 CSPG4P5Q96PW8 444 aa2.25□□□□□ -2.05
TRAPPC11-205ENST00000506426 MRPL37Q9BZE1 423 aaKnown RBP2.25□□□□□ -2.05
TRAPPC11-205ENST00000506426 SYNDIG1Q9H7V2 258 aa2.25□□□□□ -2.05
TRAPPC11-205ENST00000506426 MRM3Q9HC36 420 aaKnown RBP2.25□□□□□ -2.05
TRAPPC11-205ENST00000506426 LZTFL1Q9NQ48 299 aa2.25□□□□□ -2.05
TRAPPC11-205ENST00000506426 ABCB10Q9NRK6 738 aa2.25□□□□□ -2.05
TRAPPC11-205ENST00000506426 DMAC2Q9NW81 257 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms