RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 VAPAQ9P0L0 249 aa2.53□□□□□ -2
TCOF1-208ENST00000506063 MDFICQ9P1T7 246 aa2.53□□□□□ -2
TCOF1-208ENST00000506063 PRDM4Q9UKN5 801 aa2.53□□□□□ -2
TCOF1-208ENST00000506063 BAG5Q9UL15 447 aa2.53□□□□□ -2
TCOF1-208ENST00000506063 HHLA2Q9UM44 414 aa2.53□□□□□ -2
TCOF1-208ENST00000506063 MYRFQ9Y2G1 1151 aa2.53□□□□□ -2
TCOF1-208ENST00000506063 TBL2Q9Y4P3 447 aaKnown RBP2.53□□□□□ -2
TCOF1-208ENST00000506063 SIRT4Q9Y6E7 314 aaPredicted RBP2.53□□□□□ -2
TCOF1-208ENST00000506063 TRAV36DV7A0A075B6V5 113 aa2.52□□□□□ -2.01
TCOF1-208ENST00000506063 TRBV5-3A0A0A0MS03 114 aa2.52□□□□□ -2.01
TCOF1-208ENST00000506063 A0A0B4J2E0 115 aa2.52□□□□□ -2.01
TCOF1-208ENST00000506063 A0A1B0GWA3 101 aa2.52□□□□□ -2.01
TCOF1-208ENST00000506063 A0A1B0GX12 115 aa2.52□□□□□ -2.01
TCOF1-208ENST00000506063 TRAPPC13A5PLN9 417 aa2.52□□□□□ -2.01
TCOF1-208ENST00000506063 GMNCA6NCL1 334 aa2.52□□□□□ -2.01
TCOF1-208ENST00000506063 CPSF4LA6NMK7 179 aaKnown RBP2.52□□□□□ -2.01
TCOF1-208ENST00000506063 LRRN3E7EW58 273 aa2.52□□□□□ -2.01
TCOF1-208ENST00000506063 M0R3H8 397 aa2.52□□□□□ -2.01
TCOF1-208ENST00000506063 KPNA4O00629 521 aaPredicted RBP2.52□□□□□ -2.01
TCOF1-208ENST00000506063 PLPP3O14495 311 aa2.52□□□□□ -2.01
TCOF1-208ENST00000506063 FMO6PO60774 539 aa2.52□□□□□ -2.01
TCOF1-208ENST00000506063 SERPINI2O75830 405 aa2.52□□□□□ -2.01
TCOF1-208ENST00000506063 OR2F2O95006 317 aa2.52□□□□□ -2.01
TCOF1-208ENST00000506063 OR6A2O95222 327 aa2.52□□□□□ -2.01
TCOF1-208ENST00000506063 ZNF682O95780 498 aa2.52□□□□□ -2.01
TCOF1-208ENST00000506063 MT-ATP6P00846 226 aa2.52□□□□□ -2.01
TCOF1-208ENST00000506063 C1QCP02747 245 aa2.52□□□□□ -2.01
TCOF1-208ENST00000506063 SPARCP09486 303 aa2.52□□□□□ -2.01
TCOF1-208ENST00000506063 NUDT7P0C024 238 aa2.52□□□□□ -2.01
TCOF1-208ENST00000506063 OR8U8P0C7N1 319 aa2.52□□□□□ -2.01
TCOF1-208ENST00000506063 COX4I1P13073 169 aa2.52□□□□□ -2.01
TCOF1-208ENST00000506063 HOXB9P17482 250 aaPredicted RBP2.52□□□□□ -2.01
TCOF1-208ENST00000506063 GPX2P18283 190 aa2.52□□□□□ -2.01
TCOF1-208ENST00000506063 FPR3P25089 353 aa2.52□□□□□ -2.01
TCOF1-208ENST00000506063 PRDX6P30041 224 aa2.52□□□□□ -2.01
TCOF1-208ENST00000506063 SLC9A3P48764 834 aa2.52□□□□□ -2.01
TCOF1-208ENST00000506063 MNAT1P51948 309 aa2.52□□□□□ -2.01
TCOF1-208ENST00000506063 SLC7A2P52569 658 aa2.52□□□□□ -2.01
TCOF1-208ENST00000506063 SLC25A1P53007 311 aa2.52□□□□□ -2.01
TCOF1-208ENST00000506063 MVDP53602 400 aa2.52□□□□□ -2.01
TCOF1-208ENST00000506063 DLX6P56179 175 aa2.52□□□□□ -2.01
TCOF1-208ENST00000506063 CAV3P56539 151 aa2.52□□□□□ -2.01
TCOF1-208ENST00000506063 MRPS34P82930 218 aaKnown RBP2.52□□□□□ -2.01
TCOF1-208ENST00000506063 RUNX1Q01196 453 aa2.52□□□□□ -2.01
TCOF1-208ENST00000506063 PUDPQ08623 228 aa2.52□□□□□ -2.01
TCOF1-208ENST00000506063 KLF10Q13118 480 aa2.52□□□□□ -2.01
TCOF1-208ENST00000506063 IKZF1Q13422 519 aa2.52□□□□□ -2.01
TCOF1-208ENST00000506063 ENDOGQ14249 297 aaKnown RBP2.52□□□□□ -2.01
TCOF1-208ENST00000506063 MAPK11Q15759 364 aa2.52□□□□□ -2.01
TCOF1-208ENST00000506063 VMACQ2NL98 169 aa2.52□□□□□ -2.01
TCOF1-208ENST00000506063 PAGE3Q5JUK9 113 aa2.52□□□□□ -2.01
TCOF1-208ENST00000506063 C10orf128Q5T292 105 aa2.52□□□□□ -2.01
TCOF1-208ENST00000506063 LELP1Q5T871 98 aa2.52□□□□□ -2.01
TCOF1-208ENST00000506063 LCE2AQ5TA79 106 aaPredicted RBP2.52□□□□□ -2.01
TCOF1-208ENST00000506063 ATPAF1Q5TC12 328 aaPredicted RBP2.52□□□□□ -2.01
TCOF1-208ENST00000506063 ZNF613Q6PF04 617 aa2.52□□□□□ -2.01
TCOF1-208ENST00000506063 ULK3Q6PHR2 472 aa2.52□□□□□ -2.01
TCOF1-208ENST00000506063 ZNF788Q6ZQV5 615 aa2.52□□□□□ -2.01
TCOF1-208ENST00000506063 NET1Q7Z628 596 aaPredicted RBP2.52□□□□□ -2.01
TCOF1-208ENST00000506063 TSEN54Q7Z6J9 526 aaKnown RBP2.52□□□□□ -2.01
TCOF1-208ENST00000506063 WDR86Q86TI4 376 aa2.52□□□□□ -2.01
TCOF1-208ENST00000506063 CATSPERDQ86XM0 798 aa2.52□□□□□ -2.01
TCOF1-208ENST00000506063 FUNDC1Q8IVP5 155 aa2.52□□□□□ -2.01
TCOF1-208ENST00000506063 MSRB3Q8IXL7 192 aa2.52□□□□□ -2.01
TCOF1-208ENST00000506063 MICU2Q8IYU8 434 aa2.52□□□□□ -2.01
TCOF1-208ENST00000506063 STPG2Q8N412 459 aa2.52□□□□□ -2.01
TCOF1-208ENST00000506063 CLDN22Q8N7P3 220 aa2.52□□□□□ -2.01
TCOF1-208ENST00000506063 SMYD1Q8NB12 490 aa2.52□□□□□ -2.01
TCOF1-208ENST00000506063 BHLHE23Q8NDY6 225 aa2.52□□□□□ -2.01
TCOF1-208ENST00000506063 OR11H6Q8NGC7 330 aa2.52□□□□□ -2.01
TCOF1-208ENST00000506063 OR10A6Q8NH74 314 aa2.52□□□□□ -2.01
TCOF1-208ENST00000506063 RP9Q8TA86 221 aaKnown RBP2.52□□□□□ -2.01
TCOF1-208ENST00000506063 TMEM255BQ8WV15 326 aa2.52□□□□□ -2.01
TCOF1-208ENST00000506063 ACOT11Q8WXI4 607 aaPredicted RBP2.52□□□□□ -2.01
TCOF1-208ENST00000506063 H1FXQ92522 213 aaKnown RBP2.52□□□□□ -2.01
TCOF1-208ENST00000506063 SLC7A6Q92536 515 aa2.52□□□□□ -2.01
TCOF1-208ENST00000506063 ARPC1AQ92747 370 aa2.52□□□□□ -2.01
TCOF1-208ENST00000506063 MCHR2Q969V1 340 aa2.52□□□□□ -2.01
TCOF1-208ENST00000506063 MCUR1Q96AQ8 359 aa2.52□□□□□ -2.01
TCOF1-208ENST00000506063 TPD52L3Q96J77 140 aa2.52□□□□□ -2.01
TCOF1-208ENST00000506063 MPP4Q96JB8 637 aa2.52□□□□□ -2.01
TCOF1-208ENST00000506063 PRRC1Q96M27 445 aa2.52□□□□□ -2.01
TCOF1-208ENST00000506063 ZNF583Q96ND8 569 aa2.52□□□□□ -2.01
TCOF1-208ENST00000506063 GAFA1Q96PS6 74 aa2.52□□□□□ -2.01
TCOF1-208ENST00000506063 CDRT15Q96T59 188 aa2.52□□□□□ -2.01
TCOF1-208ENST00000506063 MCHR1Q99705 422 aa2.52□□□□□ -2.01
TCOF1-208ENST00000506063 TMED9Q9BVK6 235 aa2.52□□□□□ -2.01
TCOF1-208ENST00000506063 HCAR1Q9BXC0 346 aa2.52□□□□□ -2.01
TCOF1-208ENST00000506063 POLR2J2Q9GZM3 115 aaKnown RBP2.52□□□□□ -2.01
TCOF1-208ENST00000506063 POLR2J3Q9H1A7 115 aaKnown RBP2.52□□□□□ -2.01
TCOF1-208ENST00000506063 KAT8Q9H7Z6 458 aaKnown RBP2.52□□□□□ -2.01
TCOF1-208ENST00000506063 SIAEQ9HAT2 523 aa2.52□□□□□ -2.01
TCOF1-208ENST00000506063 GNB4Q9HAV0 340 aa2.52□□□□□ -2.01
TCOF1-208ENST00000506063 SAR1AQ9NR31 198 aa2.52□□□□□ -2.01
TCOF1-208ENST00000506063 TPSG1Q9NRR2 321 aa2.52□□□□□ -2.01
TCOF1-208ENST00000506063 C19orf12Q9NSK7 152 aa2.52□□□□□ -2.01
TCOF1-208ENST00000506063 SLC25A37Q9NYZ2 338 aa2.52□□□□□ -2.01
TCOF1-208ENST00000506063 ADA2Q9NZK5 511 aa2.52□□□□□ -2.01
TCOF1-208ENST00000506063 STX18Q9P2W9 335 aaKnown RBP2.52□□□□□ -2.01
TCOF1-208ENST00000506063 MAGEL2Q9UJ55 1249 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms