RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 CCL15Q16663 113 aa1.93□□□□□ -2.1
TOPBP1-204ENST00000505804 ANGPTL8Q6UXH0 198 aa1.93□□□□□ -2.1
TOPBP1-204ENST00000505804 COMMD1Q8N668 190 aa1.93□□□□□ -2.1
TOPBP1-204ENST00000505804 INO80EQ8NBZ0 244 aaPredicted RBP1.93□□□□□ -2.1
TOPBP1-204ENST00000505804 OR4M2Q8NGB6 313 aa1.93□□□□□ -2.1
TOPBP1-204ENST00000505804 RXFP2Q8WXD0 754 aa1.93□□□□□ -2.1
TOPBP1-204ENST00000505804 C1orf50Q9BV19 199 aa1.93□□□□□ -2.1
TOPBP1-204ENST00000505804 DEFB129Q9H1M3 183 aa1.93□□□□□ -2.1
TOPBP1-204ENST00000505804 PLEKHF2Q9H8W4 249 aa1.93□□□□□ -2.1
TOPBP1-204ENST00000505804 REEP1Q9H902 201 aa1.93□□□□□ -2.1
TOPBP1-204ENST00000505804 TREX1Q9NSU2 369 aa1.93□□□□□ -2.1
TOPBP1-204ENST00000505804 IL37Q9NZH6 218 aa1.93□□□□□ -2.1
TOPBP1-204ENST00000505804 ZNF608Q9ULD9 1512 aaPredicted RBP1.92□□□□□ -2.1
TOPBP1-204ENST00000505804 LINC01619G3V211 115 aa1.92□□□□□ -2.1
TOPBP1-204ENST00000505804 CCDC22O60826 627 aa1.92□□□□□ -2.1
TOPBP1-204ENST00000505804 PTHP01270 115 aa1.92□□□□□ -2.1
TOPBP1-204ENST00000505804 ASGR1P07306 291 aa1.92□□□□□ -2.1
TOPBP1-204ENST00000505804 P0C880 135 aa1.92□□□□□ -2.1
TOPBP1-204ENST00000505804 NELFEP18615 380 aaKnown RBP1.92□□□□□ -2.1
TOPBP1-204ENST00000505804 ATP6V0D1P61421 351 aa1.92□□□□□ -2.1
TOPBP1-204ENST00000505804 PPP1CAP62136 330 aa1.92□□□□□ -2.1
TOPBP1-204ENST00000505804 BAMBIQ13145 260 aa1.92□□□□□ -2.1
TOPBP1-204ENST00000505804 BTN1A1Q13410 526 aa1.92□□□□□ -2.1
TOPBP1-204ENST00000505804 HADHQ16836 314 aaKnown RBP1.92□□□□□ -2.1
TOPBP1-204ENST00000505804 C5orf64Q2M2E5 130 aa1.92□□□□□ -2.1
TOPBP1-204ENST00000505804 SP6Q3SY56 376 aa1.92□□□□□ -2.1
TOPBP1-204ENST00000505804 CMTM8Q8IZV2 173 aa1.92□□□□□ -2.1
TOPBP1-204ENST00000505804 ORMDL3Q8N138 153 aa1.92□□□□□ -2.1
TOPBP1-204ENST00000505804 SLC25A29Q8N8R3 303 aa1.92□□□□□ -2.1
TOPBP1-204ENST00000505804 S100PBPQ96BU1 408 aa1.92□□□□□ -2.1
TOPBP1-204ENST00000505804 FAM19A4Q96LR4 140 aa1.92□□□□□ -2.1
TOPBP1-204ENST00000505804 RDH12Q96NR8 316 aa1.92□□□□□ -2.1
TOPBP1-204ENST00000505804 ALS2CR12Q96Q35 445 aa1.92□□□□□ -2.1
TOPBP1-204ENST00000505804 IQCGQ9H095 443 aaKnown RBP1.92□□□□□ -2.1
TOPBP1-204ENST00000505804 HEBP1Q9NRV9 189 aa1.92□□□□□ -2.1
TOPBP1-204ENST00000505804 RWDD2AQ9UIY3 292 aa1.92□□□□□ -2.1
TOPBP1-204ENST00000505804 ZNF391Q9UJN7 358 aa1.92□□□□□ -2.1
TOPBP1-204ENST00000505804 ADGRA3Q8IWK6 1321 aa1.91□□□□□ -2.1
TOPBP1-204ENST00000505804 ZSWIM8A7E2V4 1837 aa1.91□□□□□ -2.1
TOPBP1-204ENST00000505804 SVILO95425 2214 aa1.91□□□□□ -2.1
TOPBP1-204ENST00000505804 RPRD2Q5VT52 1461 aaKnown RBP1.91□□□□□ -2.1
TOPBP1-204ENST00000505804 A0A0B4J2E0 115 aa1.91□□□□□ -2.1
TOPBP1-204ENST00000505804 IGKV1-6A0A0C4DH72 117 aa1.91□□□□□ -2.1
TOPBP1-204ENST00000505804 A0A1W2PNN7 141 aa1.91□□□□□ -2.1
TOPBP1-204ENST00000505804 OR6C70A6NIJ9 312 aa1.91□□□□□ -2.1
TOPBP1-204ENST00000505804 A8MWL6 223 aa1.91□□□□□ -2.1
TOPBP1-204ENST00000505804 IGKV1-39P01597 117 aa1.91□□□□□ -2.1
TOPBP1-204ENST00000505804 MAS1P04201 325 aa1.91□□□□□ -2.1
TOPBP1-204ENST00000505804 IGLV7-43P04211 117 aa1.91□□□□□ -2.1
TOPBP1-204ENST00000505804 IGKV1D-39P04432 117 aa1.91□□□□□ -2.1
TOPBP1-204ENST00000505804 PFN1P07737 140 aaKnown RBP1.91□□□□□ -2.1
TOPBP1-204ENST00000505804 TPM2P07951 284 aa1.91□□□□□ -2.1
TOPBP1-204ENST00000505804 CXCR1P25024 350 aa1.91□□□□□ -2.1
TOPBP1-204ENST00000505804 CD82P27701 267 aa1.91□□□□□ -2.1
TOPBP1-204ENST00000505804 INCA1Q0VD86 236 aa1.91□□□□□ -2.1
TOPBP1-204ENST00000505804 TAF9Q16594 264 aa1.91□□□□□ -2.1
TOPBP1-204ENST00000505804 STEAP4Q687X5 459 aa1.91□□□□□ -2.1
TOPBP1-204ENST00000505804 SLC30A8Q8IWU4 369 aa1.91□□□□□ -2.1
TOPBP1-204ENST00000505804 TRAM1L1Q8N609 369 aa1.91□□□□□ -2.1
TOPBP1-204ENST00000505804 BBOF1Q8ND07 529 aa1.91□□□□□ -2.1
TOPBP1-204ENST00000505804 ISOC2Q96AB3 205 aa1.91□□□□□ -2.1
TOPBP1-204ENST00000505804 TVP23CQ96ET8 276 aa1.91□□□□□ -2.1
TOPBP1-204ENST00000505804 UBE2E2Q96LR5 201 aa1.91□□□□□ -2.1
TOPBP1-204ENST00000505804 CSPG4P5Q96PW8 444 aa1.91□□□□□ -2.1
TOPBP1-204ENST00000505804 NAPGQ99747 312 aaPredicted RBP1.91□□□□□ -2.1
TOPBP1-204ENST00000505804 SEC22CQ9BRL7 303 aa1.91□□□□□ -2.1
TOPBP1-204ENST00000505804 C8orf33Q9H7E9 229 aaPredicted RBP1.91□□□□□ -2.1
TOPBP1-204ENST00000505804 PRSS16Q9NQE7 514 aa1.91□□□□□ -2.1
TOPBP1-204ENST00000505804 CA10Q9NS85 328 aa1.91□□□□□ -2.1
TOPBP1-204ENST00000505804 TMEM100Q9NV29 134 aa1.91□□□□□ -2.1
TOPBP1-204ENST00000505804 ADA2Q9NZK5 511 aa1.91□□□□□ -2.1
TOPBP1-204ENST00000505804 NDRG2Q9UN36 371 aaKnown RBP1.91□□□□□ -2.1
TOPBP1-204ENST00000505804 LTBP4Q8N2S1 1624 aa1.91□□□□□ -2.1
TOPBP1-204ENST00000505804 WDR19Q8NEZ3 1342 aa1.91□□□□□ -2.1
TOPBP1-204ENST00000505804 LOC102724200A0A096LPH7 203 aaPredicted RBP1.9□□□□□ -2.11
TOPBP1-204ENST00000505804 KIR2DS1A0A191URI9 304 aa1.9□□□□□ -2.11
TOPBP1-204ENST00000505804 ZNF99A8MXY4 864 aaPredicted RBP1.9□□□□□ -2.11
TOPBP1-204ENST00000505804 HACD1B0YJ81 288 aa1.9□□□□□ -2.11
TOPBP1-204ENST00000505804 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.9□□□□□ -2.11
TOPBP1-204ENST00000505804 AKR7A2O43488 359 aa1.9□□□□□ -2.11
TOPBP1-204ENST00000505804 HSBP1O75506 76 aa1.9□□□□□ -2.11
TOPBP1-204ENST00000505804 CBR3O75828 277 aa1.9□□□□□ -2.11
TOPBP1-204ENST00000505804 FARS2O95363 451 aaKnown RBP1.9□□□□□ -2.11
TOPBP1-204ENST00000505804 PTTG1O95997 202 aa1.9□□□□□ -2.11
TOPBP1-204ENST00000505804 MMP7P09237 267 aaPredicted RBP1.9□□□□□ -2.11
TOPBP1-204ENST00000505804 IL3RAP26951 378 aa1.9□□□□□ -2.11
TOPBP1-204ENST00000505804 MAGEA1P43355 309 aa1.9□□□□□ -2.11
TOPBP1-204ENST00000505804 YWHAEP62258 255 aaKnown RBP1.9□□□□□ -2.11
TOPBP1-204ENST00000505804 ZNF235Q14590 738 aa1.9□□□□□ -2.11
TOPBP1-204ENST00000505804 TSC22D1Q15714 1073 aa1.9□□□□□ -2.11
TOPBP1-204ENST00000505804 TMEM69Q5SWH9 247 aa1.9□□□□□ -2.11
TOPBP1-204ENST00000505804 PLCXD3Q63HM9 321 aa1.9□□□□□ -2.11
TOPBP1-204ENST00000505804 LINC00469Q8N7U9 141 aa1.9□□□□□ -2.11
TOPBP1-204ENST00000505804 OR52K2Q8NGK3 314 aa1.9□□□□□ -2.11
TOPBP1-204ENST00000505804 GLYATL2Q8WU03 294 aa1.9□□□□□ -2.11
TOPBP1-204ENST00000505804 HGDQ93099 445 aa1.9□□□□□ -2.11
TOPBP1-204ENST00000505804 SNF8Q96H20 258 aa1.9□□□□□ -2.11
TOPBP1-204ENST00000505804 TMEM175Q9BSA9 504 aa1.9□□□□□ -2.11
TOPBP1-204ENST00000505804 CES1P1Q9UKY3 287 aa1.9□□□□□ -2.11
TOPBP1-204ENST00000505804 SLC22A20A6NK97 555 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms