RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 LRRC8AQ8IWT6 810 aa0.95□□□□□ -2.26
HMGB1P29-201ENST00000505659 AKR7LQ8NHP1 331 aa0.95□□□□□ -2.26
HMGB1P29-201ENST00000505659 ZNF606Q8WXB4 792 aa0.95□□□□□ -2.26
HMGB1P29-201ENST00000505659 FXYD5Q96DB9 178 aa0.95□□□□□ -2.26
HMGB1P29-201ENST00000505659 CLN6Q9NWW5 311 aa0.95□□□□□ -2.26
HMGB1P29-201ENST00000505659 TMCC3Q9ULS5 477 aa0.95□□□□□ -2.26
HMGB1P29-201ENST00000505659 A0A1W2PNM2 257 aa0.94□□□□□ -2.26
HMGB1P29-201ENST00000505659 H3BQ85 93 aa0.94□□□□□ -2.26
HMGB1P29-201ENST00000505659 SYNGR2O43760 224 aa0.94□□□□□ -2.26
HMGB1P29-201ENST00000505659 ENTPD6O75354 484 aa0.94□□□□□ -2.26
HMGB1P29-201ENST00000505659 PRPS1L1P21108 318 aa0.94□□□□□ -2.26
HMGB1P29-201ENST00000505659 CALRP27797 417 aaKnown RBP0.94□□□□□ -2.26
HMGB1P29-201ENST00000505659 OTX1P32242 354 aaPredicted RBP0.94□□□□□ -2.26
HMGB1P29-201ENST00000505659 ALKBH6Q3KRA9 238 aa0.94□□□□□ -2.26
HMGB1P29-201ENST00000505659 METAP1DQ6UB28 335 aaPredicted RBP0.94□□□□□ -2.26
HMGB1P29-201ENST00000505659 PAGE2Q7Z2X7 111 aa0.94□□□□□ -2.26
HMGB1P29-201ENST00000505659 NANOGNBQ7Z5D8 188 aa0.94□□□□□ -2.26
HMGB1P29-201ENST00000505659 SLC22A9Q8IVM8 553 aa0.94□□□□□ -2.26
HMGB1P29-201ENST00000505659 EIF4E3Q8N5X7 224 aaKnown RBP0.94□□□□□ -2.26
HMGB1P29-201ENST00000505659 ITLN2Q8WWU7 325 aaPredicted RBP0.94□□□□□ -2.26
HMGB1P29-201ENST00000505659 TPD52L3Q96J77 140 aa0.94□□□□□ -2.26
HMGB1P29-201ENST00000505659 ZNF75AQ96N20 296 aa0.94□□□□□ -2.26
HMGB1P29-201ENST00000505659 C20orf166-AS1Q96NR2 134 aa0.94□□□□□ -2.26
HMGB1P29-201ENST00000505659 TEAD3Q99594 435 aa0.94□□□□□ -2.26
HMGB1P29-201ENST00000505659 EMC6Q9BV81 110 aa0.94□□□□□ -2.26
HMGB1P29-201ENST00000505659 NUP58Q9BVL2 599 aa0.94□□□□□ -2.26
HMGB1P29-201ENST00000505659 UCK2Q9BZX2 261 aa0.94□□□□□ -2.26
HMGB1P29-201ENST00000505659 FAM60AQ9NP50 221 aa0.94□□□□□ -2.26
HMGB1P29-201ENST00000505659 INIPQ9NRY2 104 aa0.94□□□□□ -2.26
HMGB1P29-201ENST00000505659 PTTG3PQ9NZH4 202 aa0.94□□□□□ -2.26
HMGB1P29-201ENST00000505659 CES1P1Q9UKY3 287 aa0.94□□□□□ -2.26
HMGB1P29-201ENST00000505659 CAB39Q9Y376 341 aaPredicted RBP0.94□□□□□ -2.26
HMGB1P29-201ENST00000505659 ZNF337Q9Y3M9 751 aa0.94□□□□□ -2.26
HMGB1P29-201ENST00000505659 DOCK6Q96HP0 2047 aa0.94□□□□□ -2.26
HMGB1P29-201ENST00000505659 SSH2Q76I76 1423 aa0.93□□□□□ -2.26
HMGB1P29-201ENST00000505659 H7C0C1 242 aa0.93□□□□□ -2.26
HMGB1P29-201ENST00000505659 HUS1O60921 280 aa0.93□□□□□ -2.26
HMGB1P29-201ENST00000505659 CDH16O75309 829 aa0.93□□□□□ -2.26
HMGB1P29-201ENST00000505659 MYL2P10916 166 aa0.93□□□□□ -2.26
HMGB1P29-201ENST00000505659 ZNF708P17019 499 aa0.93□□□□□ -2.26
HMGB1P29-201ENST00000505659 RFC3P40938 356 aa0.93□□□□□ -2.26
HMGB1P29-201ENST00000505659 OR1G1P47890 313 aa0.93□□□□□ -2.26
HMGB1P29-201ENST00000505659 ATP5OP48047 213 aa0.93□□□□□ -2.26
HMGB1P29-201ENST00000505659 HHATQ5VTY9 493 aa0.93□□□□□ -2.26
HMGB1P29-201ENST00000505659 TMPPEQ6ZT21 453 aa0.93□□□□□ -2.26
HMGB1P29-201ENST00000505659 TTC29Q8NA56 475 aaPredicted RBP0.93□□□□□ -2.26
HMGB1P29-201ENST00000505659 SLC38A4Q969I6 547 aa0.93□□□□□ -2.26
HMGB1P29-201ENST00000505659 YIPF6Q96EC8 236 aa0.93□□□□□ -2.26
HMGB1P29-201ENST00000505659 PRRC1Q96M27 445 aa0.93□□□□□ -2.26
HMGB1P29-201ENST00000505659 DERL3Q96Q80 235 aa0.93□□□□□ -2.26
HMGB1P29-201ENST00000505659 SFXN3Q9BWM7 321 aa0.93□□□□□ -2.26
HMGB1P29-201ENST00000505659 ZYG11BQ9C0D3 744 aa0.93□□□□□ -2.26
HMGB1P29-201ENST00000505659 STX18Q9P2W9 335 aaKnown RBP0.93□□□□□ -2.26
HMGB1P29-201ENST00000505659 RCL1Q9Y2P8 373 aaKnown RBP0.93□□□□□ -2.26
HMGB1P29-201ENST00000505659 ZNF257Q9Y2Q1 563 aa0.93□□□□□ -2.26
HMGB1P29-201ENST00000505659 BRD4O60885 1362 aaPredicted RBP0.93□□□□□ -2.26
HMGB1P29-201ENST00000505659 BAZ1BQ9UIG0 1483 aaKnown RBP0.92□□□□□ -2.26
HMGB1P29-201ENST00000505659 SYNJ2BP-COX16A0A087WUM0 186 aa0.92□□□□□ -2.26
HMGB1P29-201ENST00000505659 TRBV11-1A0A0K0K1C0 115 aa0.92□□□□□ -2.26
HMGB1P29-201ENST00000505659 TMEM72A0PK05 275 aa0.92□□□□□ -2.26
HMGB1P29-201ENST00000505659 C9JVG2 144 aa0.92□□□□□ -2.26
HMGB1P29-201ENST00000505659 FTH1P02794 183 aa0.92□□□□□ -2.26
HMGB1P29-201ENST00000505659 CLTAP09496 248 aa0.92□□□□□ -2.26
HMGB1P29-201ENST00000505659 SLC35G6P0C7Q6 338 aa0.92□□□□□ -2.26
HMGB1P29-201ENST00000505659 EIF2S2P20042 333 aaKnown RBP0.92□□□□□ -2.26
HMGB1P29-201ENST00000505659 RGS6P49758 472 aa0.92□□□□□ -2.26
HMGB1P29-201ENST00000505659 UBE2MP61081 183 aaKnown RBP0.92□□□□□ -2.26
HMGB1P29-201ENST00000505659 C2orf54Q08AI8 447 aa0.92□□□□□ -2.26
HMGB1P29-201ENST00000505659 OR1Q1Q15612 314 aa0.92□□□□□ -2.26
HMGB1P29-201ENST00000505659 KLHL40Q2TBA0 621 aa0.92□□□□□ -2.26
HMGB1P29-201ENST00000505659 TRMT5Q32P41 509 aaKnown RBP0.92□□□□□ -2.26
HMGB1P29-201ENST00000505659 SPESP1Q6UW49 350 aa0.92□□□□□ -2.26
HMGB1P29-201ENST00000505659 TAS2R42Q7RTR8 314 aa0.92□□□□□ -2.26
HMGB1P29-201ENST00000505659 TMEM144Q7Z5S9 345 aa0.92□□□□□ -2.26
HMGB1P29-201ENST00000505659 OR4C5Q8NGB2 326 aa0.92□□□□□ -2.26
HMGB1P29-201ENST00000505659 RAB1CQ92928 201 aa0.92□□□□□ -2.26
HMGB1P29-201ENST00000505659 YIPF5Q969M3 257 aa0.92□□□□□ -2.26
HMGB1P29-201ENST00000505659 FAM19A4Q96LR4 140 aa0.92□□□□□ -2.26
HMGB1P29-201ENST00000505659 ALS2CR12Q96Q35 445 aa0.92□□□□□ -2.26
HMGB1P29-201ENST00000505659 XPO6Q96QU8 1125 aaKnown RBP0.92□□□□□ -2.26
HMGB1P29-201ENST00000505659 PEBP4Q96S96 227 aa0.92□□□□□ -2.26
HMGB1P29-201ENST00000505659 C20orf24Q9BUV8 137 aa0.92□□□□□ -2.26
HMGB1P29-201ENST00000505659 FBXO8Q9NRD0 319 aa0.92□□□□□ -2.26
HMGB1P29-201ENST00000505659 TMEM106BQ9NUM4 274 aa0.92□□□□□ -2.26
HMGB1P29-201ENST00000505659 ICE1Q9Y2F5 2266 aa0.92□□□□□ -2.26
HMGB1P29-201ENST00000505659 TSPAN11A1L157 253 aa0.91□□□□□ -2.26
HMGB1P29-201ENST00000505659 GGTLC3B5MD39 225 aa0.91□□□□□ -2.26
HMGB1P29-201ENST00000505659 MPHOSPH10O00566 681 aaKnown RBP0.91□□□□□ -2.26
HMGB1P29-201ENST00000505659 PSPHP1O15172 72 aa0.91□□□□□ -2.26
HMGB1P29-201ENST00000505659 CTNSO60931 367 aa0.91□□□□□ -2.26
HMGB1P29-201ENST00000505659 WBP4O75554 376 aaKnown RBP0.91□□□□□ -2.26
HMGB1P29-201ENST00000505659 CCNB2O95067 398 aa0.91□□□□□ -2.26
HMGB1P29-201ENST00000505659 SEC11BP0C7V7 166 aa0.91□□□□□ -2.26
HMGB1P29-201ENST00000505659 GTF2E2P29084 291 aaKnown RBP0.91□□□□□ -2.26
HMGB1P29-201ENST00000505659 NBL1P41271 181 aa0.91□□□□□ -2.26
HMGB1P29-201ENST00000505659 MRPL19P49406 292 aaKnown RBP0.91□□□□□ -2.26
HMGB1P29-201ENST00000505659 HMGN5P82970 282 aaKnown RBP0.91□□□□□ -2.26
HMGB1P29-201ENST00000505659 KRTAP21-3Q3LHN1 58 aa0.91□□□□□ -2.26
HMGB1P29-201ENST00000505659 HSDL1Q3SXM5 330 aa0.91□□□□□ -2.26
HMGB1P29-201ENST00000505659 ZYG11AQ6WRX3 759 aa0.91□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms