RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 RNF122Q9H9V4 155 aa10.47□□□□□ -0.73
UBE3D-206ENST00000505226 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.47□□□□□ -0.73
UBE3D-206ENST00000505226 FOXI3A8MTJ6 420 aaPredicted RBP10.47□□□□□ -0.73
UBE3D-206ENST00000505226 MSTNO14793 375 aa10.47□□□□□ -0.73
UBE3D-206ENST00000505226 APOC1P02654 83 aa10.47□□□□□ -0.73
UBE3D-206ENST00000505226 HCKP08631 526 aa10.47□□□□□ -0.73
UBE3D-206ENST00000505226 SULT1A2P50226 295 aa10.47□□□□□ -0.73
UBE3D-206ENST00000505226 RNF4P78317 190 aa10.47□□□□□ -0.73
UBE3D-206ENST00000505226 HSD11B2P80365 405 aa10.47□□□□□ -0.73
UBE3D-206ENST00000505226 ARFRP1Q13795 201 aa10.47□□□□□ -0.73
UBE3D-206ENST00000505226 CARD17Q5XLA6 110 aa10.47□□□□□ -0.73
UBE3D-206ENST00000505226 NPRL2Q8WTW4 380 aa10.47□□□□□ -0.73
UBE3D-206ENST00000505226 C14orf79Q96F83 325 aa10.47□□□□□ -0.73
UBE3D-206ENST00000505226 SMIM3Q9BZL3 60 aa10.47□□□□□ -0.73
UBE3D-206ENST00000505226 EHFQ9NZC4 300 aa10.47□□□□□ -0.73
UBE3D-206ENST00000505226 ASH2LQ9UBL3 628 aa10.47□□□□□ -0.73
UBE3D-206ENST00000505226 ADAMTS9Q9P2N4 1935 aa10.47□□□□□ -0.73
UBE3D-206ENST00000505226 NCOA6Q14686 2063 aaPredicted RBP10.47□□□□□ -0.73
UBE3D-206ENST00000505226 ANKUB1A6NFN9 424 aa10.46□□□□□ -0.73
UBE3D-206ENST00000505226 RAMP1O60894 148 aa10.46□□□□□ -0.73
UBE3D-206ENST00000505226 SLC16A13Q7RTY0 426 aa10.46□□□□□ -0.73
UBE3D-206ENST00000505226 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.46□□□□□ -0.73
UBE3D-206ENST00000505226 GKN2Q86XP6 184 aa10.46□□□□□ -0.73
UBE3D-206ENST00000505226 NANPQ8TBE9 248 aa10.46□□□□□ -0.73
UBE3D-206ENST00000505226 CDCA3Q99618 268 aaPredicted RBP10.46□□□□□ -0.73
UBE3D-206ENST00000505226 SULT4A1Q9BR01 284 aa10.46□□□□□ -0.73
UBE3D-206ENST00000505226 EGLN1Q9GZT9 426 aa10.46□□□□□ -0.73
UBE3D-206ENST00000505226 DNAJB11Q9UBS4 358 aa10.46□□□□□ -0.73
UBE3D-206ENST00000505226 NPIPB13A6NJU9 1138 aa10.46□□□□□ -0.73
UBE3D-206ENST00000505226 LINC00587B1AMM8 73 aa10.46□□□□□ -0.73
UBE3D-206ENST00000505226 NPIPB4C9JG80 1138 aa10.46□□□□□ -0.73
UBE3D-206ENST00000505226 HPNP05981 417 aa10.46□□□□□ -0.73
UBE3D-206ENST00000505226 FBLP22087 321 aaKnown RBP10.46□□□□□ -0.73
UBE3D-206ENST00000505226 OR1D5P58170 312 aa10.46□□□□□ -0.73
UBE3D-206ENST00000505226 CSNK2A1P68400 391 aaPredicted RBP10.46□□□□□ -0.73
UBE3D-206ENST00000505226 SWI5Q1ZZU3 235 aa10.46□□□□□ -0.73
UBE3D-206ENST00000505226 SKA3Q8IX90 412 aa10.46□□□□□ -0.73
UBE3D-206ENST00000505226 FAM89BQ8N5H3 189 aa10.46□□□□□ -0.73
UBE3D-206ENST00000505226 CSNK2A3Q8NEV1 391 aa10.46□□□□□ -0.73
UBE3D-206ENST00000505226 TMEM234Q8WY98 164 aa10.46□□□□□ -0.73
UBE3D-206ENST00000505226 KIRREL1Q96J84 757 aa10.46□□□□□ -0.73
UBE3D-206ENST00000505226 SCRT1Q9BWW7 348 aa10.46□□□□□ -0.73
UBE3D-206ENST00000505226 SDK1Q7Z5N4 2213 aa10.46□□□□□ -0.74
UBE3D-206ENST00000505226 EXPH5Q8NEV8 1989 aa10.46□□□□□ -0.74
UBE3D-206ENST00000505226 PGA4P0DJD7 388 aa10.46□□□□□ -0.74
UBE3D-206ENST00000505226 PGA3P0DJD8 388 aa10.46□□□□□ -0.74
UBE3D-206ENST00000505226 THBS4P35443 961 aa10.46□□□□□ -0.74
UBE3D-206ENST00000505226 ECH1Q13011 328 aa10.46□□□□□ -0.74
UBE3D-206ENST00000505226 MYBPHQ13203 477 aa10.46□□□□□ -0.74
UBE3D-206ENST00000505226 C5orf46Q6UWT4 87 aa10.46□□□□□ -0.74
UBE3D-206ENST00000505226 Q6ZRG5 221 aa10.46□□□□□ -0.74
UBE3D-206ENST00000505226 FAM57BQ71RH2 274 aa10.46□□□□□ -0.74
UBE3D-206ENST00000505226 OR6S1Q8NH40 331 aa10.46□□□□□ -0.74
UBE3D-206ENST00000505226 RHBDD1Q8TEB9 315 aa10.46□□□□□ -0.74
UBE3D-206ENST00000505226 ERGIC1Q969X5 290 aa10.46□□□□□ -0.74
UBE3D-206ENST00000505226 HIST1H2BAQ96A08 127 aa10.46□□□□□ -0.74
UBE3D-206ENST00000505226 LYZL4Q96KX0 146 aa10.46□□□□□ -0.74
UBE3D-206ENST00000505226 CNTNAP3Q9BZ76 1288 aa10.46□□□□□ -0.74
UBE3D-206ENST00000505226 UCK1Q9HA47 277 aa10.46□□□□□ -0.74
UBE3D-206ENST00000505226 FANCFQ9NPI8 374 aa10.46□□□□□ -0.74
UBE3D-206ENST00000505226 FBXL17Q9UF56 701 aa10.46□□□□□ -0.74
UBE3D-206ENST00000505226 AMDHD2Q9Y303 409 aa10.46□□□□□ -0.74
UBE3D-206ENST00000505226 ZNF878C9JN71 531 aa10.45□□□□□ -0.74
UBE3D-206ENST00000505226 IFNA4P05014 189 aa10.45□□□□□ -0.74
UBE3D-206ENST00000505226 MYF5P13349 255 aa10.45□□□□□ -0.74
UBE3D-206ENST00000505226 FOLR2P14207 255 aa10.45□□□□□ -0.74
UBE3D-206ENST00000505226 OR3A2P47893 321 aa10.45□□□□□ -0.74
UBE3D-206ENST00000505226 PPT1P50897 306 aa10.45□□□□□ -0.74
UBE3D-206ENST00000505226 ACTBL2Q562R1 376 aa10.45□□□□□ -0.74
UBE3D-206ENST00000505226 GALNTL5Q7Z4T8 443 aa10.45□□□□□ -0.74
UBE3D-206ENST00000505226 C17orf82Q86X59 251 aaPredicted RBP10.45□□□□□ -0.74
UBE3D-206ENST00000505226 APCDD1LQ8NCL9 501 aa10.45□□□□□ -0.74
UBE3D-206ENST00000505226 OR56B1Q8NGI3 324 aa10.45□□□□□ -0.74
UBE3D-206ENST00000505226 OR51T1Q8NGJ9 327 aa10.45□□□□□ -0.74
UBE3D-206ENST00000505226 ST8SIA1Q92185 356 aa10.45□□□□□ -0.74
UBE3D-206ENST00000505226 IP6K3Q96PC2 410 aa10.45□□□□□ -0.74
UBE3D-206ENST00000505226 GPER1Q99527 375 aa10.45□□□□□ -0.74
UBE3D-206ENST00000505226 HDHD3Q9BSH5 251 aaPredicted RBP10.45□□□□□ -0.74
UBE3D-206ENST00000505226 OR10A2Q9H208 303 aa10.45□□□□□ -0.74
UBE3D-206ENST00000505226 LIME1Q9H400 295 aa10.45□□□□□ -0.74
UBE3D-206ENST00000505226 TIMM10BQ9Y5J6 103 aa10.45□□□□□ -0.74
UBE3D-206ENST00000505226 C5orf52A6NGY3 159 aa10.45□□□□□ -0.74
UBE3D-206ENST00000505226 DHRS7CA6NNS2 312 aa10.45□□□□□ -0.74
UBE3D-206ENST00000505226 ZNF205O95201 554 aa10.45□□□□□ -0.74
UBE3D-206ENST00000505226 IGLV3-19P01714 112 aa10.45□□□□□ -0.74
UBE3D-206ENST00000505226 DAOP14920 347 aa10.45□□□□□ -0.74
UBE3D-206ENST00000505226 NME1P15531 152 aaKnown RBP10.45□□□□□ -0.74
UBE3D-206ENST00000505226 EN2P19622 333 aaPredicted RBP10.45□□□□□ -0.74
UBE3D-206ENST00000505226 RPL12P30050 165 aaKnown RBP10.45□□□□□ -0.74
UBE3D-206ENST00000505226 APOBEC1P41238 236 aaKnown RBP10.45□□□□□ -0.74
UBE3D-206ENST00000505226 TMEM33P57088 247 aa10.45□□□□□ -0.74
UBE3D-206ENST00000505226 IAH1Q2TAA2 248 aaPredicted RBP10.45□□□□□ -0.74
UBE3D-206ENST00000505226 LYPD6BQ8NI32 183 aa10.45□□□□□ -0.74
UBE3D-206ENST00000505226 POC1BQ8TC44 478 aa10.45□□□□□ -0.74
UBE3D-206ENST00000505226 ISOC2Q96AB3 205 aa10.45□□□□□ -0.74
UBE3D-206ENST00000505226 CHRNA10Q9GZZ6 450 aa10.45□□□□□ -0.74
UBE3D-206ENST00000505226 NKX2-4Q9H2Z4 354 aa10.45□□□□□ -0.74
UBE3D-206ENST00000505226 ZNF581Q9P0T4 197 aa10.45□□□□□ -0.74
UBE3D-206ENST00000505226 MCTS1Q9ULC4 181 aaKnown RBP10.45□□□□□ -0.74
UBE3D-206ENST00000505226 A0A1W2PNR3 127 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms