RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 MAP2K3P46734 347 aa11.87□□□□□ -0.51
HOXC9-202ENST00000504557 GPM6AP51674 278 aa11.87□□□□□ -0.51
HOXC9-202ENST00000504557 CDC42P60953 191 aa11.87□□□□□ -0.51
HOXC9-202ENST00000504557 EFNB1P98172 346 aa11.87□□□□□ -0.51
HOXC9-202ENST00000504557 SNCBQ16143 134 aa11.87□□□□□ -0.51
HOXC9-202ENST00000504557 BCL2L15Q5TBC7 163 aa11.87□□□□□ -0.51
HOXC9-202ENST00000504557 DEGS2Q6QHC5 323 aa11.87□□□□□ -0.51
HOXC9-202ENST00000504557 DUX4L9Q6RFH8 374 aaPredicted RBP11.87□□□□□ -0.51
HOXC9-202ENST00000504557 WDR82Q6UXN9 313 aa11.87□□□□□ -0.51
HOXC9-202ENST00000504557 MOB3CQ70IA8 216 aa11.87□□□□□ -0.51
HOXC9-202ENST00000504557 SSX6Q7RTT6 188 aa11.87□□□□□ -0.51
HOXC9-202ENST00000504557 C11orf53Q8IXP5 236 aa11.87□□□□□ -0.51
HOXC9-202ENST00000504557 ZDHHC23Q8IYP9 409 aa11.87□□□□□ -0.51
HOXC9-202ENST00000504557 BCL6BQ8N143 479 aaPredicted RBP11.87□□□□□ -0.51
HOXC9-202ENST00000504557 FGFRL1Q8N441 504 aa11.87□□□□□ -0.51
HOXC9-202ENST00000504557 ST8SIA4Q92187 359 aa11.87□□□□□ -0.51
HOXC9-202ENST00000504557 UBE2FQ969M7 185 aa11.87□□□□□ -0.51
HOXC9-202ENST00000504557 ITPKCQ96DU7 683 aa11.87□□□□□ -0.51
HOXC9-202ENST00000504557 DUX5Q96PT3 197 aa11.87□□□□□ -0.51
HOXC9-202ENST00000504557 CCL13Q99616 98 aa11.87□□□□□ -0.51
HOXC9-202ENST00000504557 SMURF1Q9HCE7 757 aa11.87□□□□□ -0.51
HOXC9-202ENST00000504557 SNTG1Q9NSN8 517 aa11.87□□□□□ -0.51
HOXC9-202ENST00000504557 CLN6Q9NWW5 311 aa11.87□□□□□ -0.51
HOXC9-202ENST00000504557 DNAJB11Q9UBS4 358 aa11.87□□□□□ -0.51
HOXC9-202ENST00000504557 DUX4Q9UBX2 424 aa11.87□□□□□ -0.51
HOXC9-202ENST00000504557 ZNF69Q9UC07 566 aa11.87□□□□□ -0.51
HOXC9-202ENST00000504557 WARS2Q9UGM6 360 aaKnown RBP11.87□□□□□ -0.51
HOXC9-202ENST00000504557 PIGLQ9Y2B2 252 aa11.87□□□□□ -0.51
HOXC9-202ENST00000504557 POLR3KQ9Y2Y1 108 aaPredicted RBP11.87□□□□□ -0.51
HOXC9-202ENST00000504557 MPC1Q9Y5U8 109 aa11.87□□□□□ -0.51
HOXC9-202ENST00000504557 DNHD1Q96M86 4753 aa11.87□□□□□ -0.51
HOXC9-202ENST00000504557 TRAV40A0A0B4J280 105 aa11.86□□□□□ -0.51
HOXC9-202ENST00000504557 ZNF816-ZNF321PA0A0X1KG74 233 aa11.86□□□□□ -0.51
HOXC9-202ENST00000504557 A6NIN4 97 aa11.86□□□□□ -0.51
HOXC9-202ENST00000504557 C22orf46C9J442 243 aa11.86□□□□□ -0.51
HOXC9-202ENST00000504557 P2RY10O00398 339 aa11.86□□□□□ -0.51
HOXC9-202ENST00000504557 PHYHO14832 338 aa11.86□□□□□ -0.51
HOXC9-202ENST00000504557 AKR7A2O43488 359 aa11.86□□□□□ -0.51
HOXC9-202ENST00000504557 CST4P01036 141 aa11.86□□□□□ -0.51
HOXC9-202ENST00000504557 KRT8P05787 483 aa11.86□□□□□ -0.51
HOXC9-202ENST00000504557 FPR2P25090 351 aa11.86□□□□□ -0.51
HOXC9-202ENST00000504557 PSMB10P40306 273 aa11.86□□□□□ -0.51
HOXC9-202ENST00000504557 FGF12P61328 243 aa11.86□□□□□ -0.51
HOXC9-202ENST00000504557 ACTG1P63261 375 aa11.86□□□□□ -0.51
HOXC9-202ENST00000504557 ROM1Q03395 351 aa11.86□□□□□ -0.51
HOXC9-202ENST00000504557 KLF17Q5JT82 389 aaPredicted RBP11.86□□□□□ -0.51
HOXC9-202ENST00000504557 PLCXD3Q63HM9 321 aa11.86□□□□□ -0.51
HOXC9-202ENST00000504557 ZFP1Q6P2D0 407 aa11.86□□□□□ -0.51
HOXC9-202ENST00000504557 ZNF841Q6ZN19 808 aa11.86□□□□□ -0.51
HOXC9-202ENST00000504557 GALNT4Q8N4A0 578 aa11.86□□□□□ -0.51
HOXC9-202ENST00000504557 CBR4Q8N4T8 237 aa11.86□□□□□ -0.51
HOXC9-202ENST00000504557 SCCPDHQ8NBX0 429 aa11.86□□□□□ -0.51
HOXC9-202ENST00000504557 SEMA6DQ8NFY4 1073 aa11.86□□□□□ -0.51
HOXC9-202ENST00000504557 HPSE2Q8WWQ2 592 aa11.86□□□□□ -0.51
HOXC9-202ENST00000504557 OR5P3Q8WZ94 311 aa11.86□□□□□ -0.51
HOXC9-202ENST00000504557 PCGF1Q9BSM1 259 aa11.86□□□□□ -0.51
HOXC9-202ENST00000504557 SUCNR1Q9BXA5 334 aa11.86□□□□□ -0.51
HOXC9-202ENST00000504557 FGF23Q9GZV9 251 aaPredicted RBP11.86□□□□□ -0.51
HOXC9-202ENST00000504557 MS4A7Q9GZW8 240 aaPredicted RBP11.86□□□□□ -0.51
HOXC9-202ENST00000504557 TRIM36Q9NQ86 728 aa11.86□□□□□ -0.51
HOXC9-202ENST00000504557 MRM2Q9UI43 246 aaKnown RBP11.86□□□□□ -0.51
HOXC9-202ENST00000504557 NUP50Q9UKX7 468 aa11.86□□□□□ -0.51
HOXC9-202ENST00000504557 SLC22A13Q9Y226 551 aa11.86□□□□□ -0.51
HOXC9-202ENST00000504557 SOX21Q9Y651 276 aaPredicted RBP11.86□□□□□ -0.51
HOXC9-202ENST00000504557 R4GMQ9 66 aa11.86□□□□□ -0.51
HOXC9-202ENST00000504557 A0A0U1RQV5 110 aa11.85□□□□□ -0.51
HOXC9-202ENST00000504557 A0A1W2PQL4 384 aaPredicted RBP11.85□□□□□ -0.51
HOXC9-202ENST00000504557 ZNF732B4DXR9 585 aa11.85□□□□□ -0.51
HOXC9-202ENST00000504557 BAG2O95816 211 aa11.85□□□□□ -0.51
HOXC9-202ENST00000504557 FSHBP01225 129 aa11.85□□□□□ -0.51
HOXC9-202ENST00000504557 TTRP02766 147 aa11.85□□□□□ -0.51
HOXC9-202ENST00000504557 ALPLP05186 524 aa11.85□□□□□ -0.51
HOXC9-202ENST00000504557 IGHV4-38-2P0DP08 117 aa11.85□□□□□ -0.51
HOXC9-202ENST00000504557 HTR1FP30939 366 aa11.85□□□□□ -0.51
HOXC9-202ENST00000504557 PAX8Q06710 450 aa11.85□□□□□ -0.51
HOXC9-202ENST00000504557 RIPPLY1Q0D2K3 151 aa11.85□□□□□ -0.51
HOXC9-202ENST00000504557 IKZF1Q13422 519 aa11.85□□□□□ -0.51
HOXC9-202ENST00000504557 MICBQ29980 383 aa11.85□□□□□ -0.51
HOXC9-202ENST00000504557 WDR38Q5JTN6 314 aa11.85□□□□□ -0.51
HOXC9-202ENST00000504557 FAM216BQ8N7L0 139 aa11.85□□□□□ -0.51
HOXC9-202ENST00000504557 SIGLECL1Q8N7X8 197 aa11.85□□□□□ -0.51
HOXC9-202ENST00000504557 OR8J1Q8NGP2 316 aa11.85□□□□□ -0.51
HOXC9-202ENST00000504557 EME1Q96AY2 570 aa11.85□□□□□ -0.51
HOXC9-202ENST00000504557 RAB3IPQ96QF0 476 aaPredicted RBP11.85□□□□□ -0.51
HOXC9-202ENST00000504557 WDR13Q9H1Z4 485 aa11.85□□□□□ -0.51
HOXC9-202ENST00000504557 RNPEPL1Q9HAU8 725 aa11.85□□□□□ -0.51
HOXC9-202ENST00000504557 AASSQ9UDR5 926 aa11.85□□□□□ -0.51
HOXC9-202ENST00000504557 NUFIP1Q9UHK0 495 aaKnown RBP11.85□□□□□ -0.51
HOXC9-202ENST00000504557 ZNF391Q9UJN7 358 aa11.85□□□□□ -0.51
HOXC9-202ENST00000504557 OR52A1Q9UKL2 312 aa11.85□□□□□ -0.51
HOXC9-202ENST00000504557 ACOD1A6NK06 481 aa11.84□□□□□ -0.51
HOXC9-202ENST00000504557 DVL1O14640 695 aa11.84□□□□□ -0.51
HOXC9-202ENST00000504557 ENSAO43768 121 aaKnown RBP11.84□□□□□ -0.51
HOXC9-202ENST00000504557 RHBDL1O75783 438 aa11.84□□□□□ -0.51
HOXC9-202ENST00000504557 FSTL3O95633 263 aa11.84□□□□□ -0.51
HOXC9-202ENST00000504557 LHBP01229 141 aa11.84□□□□□ -0.51
HOXC9-202ENST00000504557 ALDH3A2P51648 485 aa11.84□□□□□ -0.51
HOXC9-202ENST00000504557 HILS1P60008 231 aa11.84□□□□□ -0.51
HOXC9-202ENST00000504557 PAX2Q02962 417 aa11.84□□□□□ -0.51
HOXC9-202ENST00000504557 EGR3Q06889 387 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms