RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 CDAP32320 146 aa6.76□□□□□ -1.33
NEDD9-208ENST00000504387 ZNF93P35789 620 aaPredicted RBP6.76□□□□□ -1.33
NEDD9-208ENST00000504387 RBMXP38159 391 aaKnown RBP6.76□□□□□ -1.33
NEDD9-208ENST00000504387 SNU13P55769 128 aaKnown RBP6.76□□□□□ -1.33
NEDD9-208ENST00000504387 GAB4Q2WGN9 574 aa6.76□□□□□ -1.33
NEDD9-208ENST00000504387 PLAC9Q5JTB6 97 aa6.76□□□□□ -1.33
NEDD9-208ENST00000504387 C1orf189Q5VU69 101 aa6.76□□□□□ -1.33
NEDD9-208ENST00000504387 EIF5AL1Q6IS14 154 aaKnown RBP6.76□□□□□ -1.33
NEDD9-208ENST00000504387 KCTD18Q6PI47 426 aaPredicted RBP6.76□□□□□ -1.33
NEDD9-208ENST00000504387 BTNL8Q6UX41 500 aa6.76□□□□□ -1.33
NEDD9-208ENST00000504387 MEX3BQ6ZN04 569 aaKnown RBP6.76□□□□□ -1.33
NEDD9-208ENST00000504387 ABHD12BQ7Z5M8 362 aaPredicted RBP6.76□□□□□ -1.33
NEDD9-208ENST00000504387 WDFY1Q8IWB7 410 aa6.76□□□□□ -1.33
NEDD9-208ENST00000504387 SUMF2Q8NBJ7 301 aa6.76□□□□□ -1.33
NEDD9-208ENST00000504387 NECAP1Q8NC96 275 aa6.76□□□□□ -1.33
NEDD9-208ENST00000504387 DYRK2Q92630 601 aa6.76□□□□□ -1.33
NEDD9-208ENST00000504387 EDAQ92838 391 aa6.76□□□□□ -1.33
NEDD9-208ENST00000504387 SMIM8Q96KF7 97 aa6.76□□□□□ -1.33
NEDD9-208ENST00000504387 NXF5Q9H1B4 397 aaKnown RBP6.76□□□□□ -1.33
NEDD9-208ENST00000504387 PRTFDC1Q9NRG1 225 aa6.76□□□□□ -1.33
NEDD9-208ENST00000504387 PISDQ9UG56 409 aa6.76□□□□□ -1.33
NEDD9-208ENST00000504387 PADI1Q9ULC6 663 aa6.76□□□□□ -1.33
NEDD9-208ENST00000504387 HIF3AQ9Y2N7 669 aa6.76□□□□□ -1.33
NEDD9-208ENST00000504387 NBEAQ8NFP9 2946 aa6.76□□□□□ -1.33
NEDD9-208ENST00000504387 TCRBV21S2A2A0A5A6 115 aa6.76□□□□□ -1.33
NEDD9-208ENST00000504387 IFNL4K9M1U5 179 aa6.76□□□□□ -1.33
NEDD9-208ENST00000504387 MMP9P14780 707 aa6.76□□□□□ -1.33
NEDD9-208ENST00000504387 ZNF708P17019 499 aa6.76□□□□□ -1.33
NEDD9-208ENST00000504387 GABRR1P24046 479 aa6.76□□□□□ -1.33
NEDD9-208ENST00000504387 MNX1P50219 401 aaPredicted RBP6.76□□□□□ -1.33
NEDD9-208ENST00000504387 UBE2KP61086 200 aa6.76□□□□□ -1.33
NEDD9-208ENST00000504387 RPS23P62266 143 aaKnown RBP6.76□□□□□ -1.33
NEDD9-208ENST00000504387 HHEXQ03014 270 aa6.76□□□□□ -1.33
NEDD9-208ENST00000504387 TMEM240Q5SV17 173 aa6.76□□□□□ -1.33
NEDD9-208ENST00000504387 OR2T2Q6IF00 324 aa6.76□□□□□ -1.33
NEDD9-208ENST00000504387 LINC00114Q6XXX2 140 aa6.76□□□□□ -1.33
NEDD9-208ENST00000504387 OR13H1Q8NG92 308 aa6.76□□□□□ -1.33
NEDD9-208ENST00000504387 SLC37A2Q8TED4 501 aa6.76□□□□□ -1.33
NEDD9-208ENST00000504387 HPSE2Q8WWQ2 592 aa6.76□□□□□ -1.33
NEDD9-208ENST00000504387 SNX22Q96L94 193 aa6.76□□□□□ -1.33
NEDD9-208ENST00000504387 MAGT1Q9H0U3 335 aa6.76□□□□□ -1.33
NEDD9-208ENST00000504387 VDAC3Q9Y277 283 aa6.76□□□□□ -1.33
NEDD9-208ENST00000504387 TIMM10BQ9Y5J6 103 aa6.76□□□□□ -1.33
NEDD9-208ENST00000504387 A0A0A6YYD4 124 aa6.76□□□□□ -1.33
NEDD9-208ENST00000504387 PRSS37A4D1T9 235 aa6.76□□□□□ -1.33
NEDD9-208ENST00000504387 C2orf74A8MZ97 194 aa6.76□□□□□ -1.33
NEDD9-208ENST00000504387 CLDN4O14493 209 aa6.76□□□□□ -1.33
NEDD9-208ENST00000504387 SFT2D2O95562 160 aa6.76□□□□□ -1.33
NEDD9-208ENST00000504387 AK1P00568 194 aa6.76□□□□□ -1.33
NEDD9-208ENST00000504387 SPINK2P20155 84 aa6.76□□□□□ -1.33
NEDD9-208ENST00000504387 CYCSP99999 105 aaKnown RBP6.76□□□□□ -1.33
NEDD9-208ENST00000504387 EGR3Q06889 387 aa6.76□□□□□ -1.33
NEDD9-208ENST00000504387 ALG11Q2TAA5 492 aa6.76□□□□□ -1.33
NEDD9-208ENST00000504387 HLA-DQA1Q5Y7H0 255 aa6.76□□□□□ -1.33
NEDD9-208ENST00000504387 WBP2NLQ6ICG8 309 aa6.76□□□□□ -1.33
NEDD9-208ENST00000504387 C5orf24Q7Z6I8 188 aa6.76□□□□□ -1.33
NEDD9-208ENST00000504387 DPPA2Q7Z7J5 298 aa6.76□□□□□ -1.33
NEDD9-208ENST00000504387 TMEM123Q8N131 208 aa6.76□□□□□ -1.33
NEDD9-208ENST00000504387 OR51T1Q8NGJ9 327 aa6.76□□□□□ -1.33
NEDD9-208ENST00000504387 OR13G1Q8NGZ3 307 aa6.76□□□□□ -1.33
NEDD9-208ENST00000504387 C2orf50Q96LR7 162 aa6.76□□□□□ -1.33
NEDD9-208ENST00000504387 S100A13Q99584 98 aa6.76□□□□□ -1.33
NEDD9-208ENST00000504387 SLC26A1Q9H2B4 701 aa6.76□□□□□ -1.33
NEDD9-208ENST00000504387 CHST11Q9NPF2 352 aa6.76□□□□□ -1.33
NEDD9-208ENST00000504387 TREM2Q9NZC2 230 aa6.76□□□□□ -1.33
NEDD9-208ENST00000504387 SLC17A4Q9Y2C5 497 aa6.76□□□□□ -1.33
NEDD9-208ENST00000504387 DMRT1Q9Y5R6 373 aa6.76□□□□□ -1.33
NEDD9-208ENST00000504387 HS3ST3B1Q9Y662 390 aa6.76□□□□□ -1.33
NEDD9-208ENST00000504387 IGKV1D-8A0A087WSZ0 117 aa6.75□□□□□ -1.33
NEDD9-208ENST00000504387 ZNHIT1O43257 154 aa6.75□□□□□ -1.33
NEDD9-208ENST00000504387 ONECUT2O95948 504 aa6.75□□□□□ -1.33
NEDD9-208ENST00000504387 MYF5P13349 255 aa6.75□□□□□ -1.33
NEDD9-208ENST00000504387 ZNF20P17024 532 aa6.75□□□□□ -1.33
NEDD9-208ENST00000504387 CX3CR1P49238 355 aa6.75□□□□□ -1.33
NEDD9-208ENST00000504387 SULT1A2P50226 295 aa6.75□□□□□ -1.33
NEDD9-208ENST00000504387 SLC37A1P57057 533 aa6.75□□□□□ -1.33
NEDD9-208ENST00000504387 NKX6-1P78426 367 aaPredicted RBP6.75□□□□□ -1.33
NEDD9-208ENST00000504387 KHDC3LQ587J8 217 aa6.75□□□□□ -1.33
NEDD9-208ENST00000504387 AKR1C8PQ5T2L2 129 aa6.75□□□□□ -1.33
NEDD9-208ENST00000504387 ATG4DQ86TL0 474 aaPredicted RBP6.75□□□□□ -1.33
NEDD9-208ENST00000504387 OR5T1Q8NG75 326 aa6.75□□□□□ -1.33
NEDD9-208ENST00000504387 OR56B1Q8NGI3 324 aa6.75□□□□□ -1.33
NEDD9-208ENST00000504387 AQP3Q92482 292 aa6.75□□□□□ -1.33
NEDD9-208ENST00000504387 LIN37Q96GY3 246 aaPredicted RBP6.75□□□□□ -1.33
NEDD9-208ENST00000504387 C5orf34Q96MH7 638 aa6.75□□□□□ -1.33
NEDD9-208ENST00000504387 VSTM2LQ96N03 204 aa6.75□□□□□ -1.33
NEDD9-208ENST00000504387 RTBDNQ9BSG5 229 aaPredicted RBP6.75□□□□□ -1.33
NEDD9-208ENST00000504387 NMES1Q9C002 83 aa6.75□□□□□ -1.33
NEDD9-208ENST00000504387 TUBA4BQ9H853 241 aa6.75□□□□□ -1.33
NEDD9-208ENST00000504387 WFDC1Q9HC57 220 aa6.75□□□□□ -1.33
NEDD9-208ENST00000504387 ZNF581Q9P0T4 197 aa6.75□□□□□ -1.33
NEDD9-208ENST00000504387 NXT1Q9UKK6 140 aaKnown RBP6.75□□□□□ -1.33
NEDD9-208ENST00000504387 LIPGQ9Y5X9 500 aa6.75□□□□□ -1.33
NEDD9-208ENST00000504387 KIAA1549LQ6ZVL6 1849 aa6.75□□□□□ -1.33
NEDD9-208ENST00000504387 C17orf105B2RV13 164 aa6.75□□□□□ -1.33
NEDD9-208ENST00000504387 PPP1R2P9O14990 202 aa6.75□□□□□ -1.33
NEDD9-208ENST00000504387 ZNF264O43296 627 aa6.75□□□□□ -1.33
NEDD9-208ENST00000504387 IL2RAP01589 272 aa6.75□□□□□ -1.33
NEDD9-208ENST00000504387 CD1AP06126 327 aa6.75□□□□□ -1.33
NEDD9-208ENST00000504387 ASAH2BP0C7U1 165 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms