RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 C9orf153Q5TBE3 101 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 ANKRD16Q6P6B7 361 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 AMIGO3Q86WK7 504 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 LILRA2Q8N149 483 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 PNKDQ8N490 385 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 ACOT4Q8N9L9 421 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 ZNF114Q8NC26 417 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 ACVR1CQ8NER5 493 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 EEF1AKMT3Q96AZ1 226 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 PERPQ96FX8 193 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 DPY30Q9C005 99 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 UBIAD1Q9Y5Z9 338 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 ITGA5P08648 1049 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 MRPL3P09001 348 aaKnown RBP5.61□□□□□ -1.51
CLCN3-204ENST00000504131 SLC10A3P09131 477 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 ZNF19P17023 458 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 GABRA3P34903 492 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 CTF1Q16619 201 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 CD300EQ496F6 205 aaPredicted RBP5.61□□□□□ -1.51
CLCN3-204ENST00000504131 C1orf194Q5T5A4 169 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 NHLRC1Q6VVB1 395 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 Q6ZRG5 221 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 Q7L0L9 218 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 ADGRE4PQ86SQ3 457 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 PHF13Q86YI8 300 aaPredicted RBP5.61□□□□□ -1.51
CLCN3-204ENST00000504131 RAB42Q8N4Z0 105 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 MDGA1Q8NFP4 955 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 OR2T12Q8NG77 320 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 ZDHHC16Q969W1 377 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 FKBP10Q96AY3 582 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 SLAMF6Q96DU3 332 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 WDR83Q9BRX9 315 aaKnown RBP5.61□□□□□ -1.51
CLCN3-204ENST00000504131 OR51I1Q9H343 314 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 ANXA10Q9UJ72 324 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 NEU3Q9UQ49 428 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 GLI3P10071 1580 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 LTBP4Q8N2S1 1624 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 MEGF6O75095 1541 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 KBTBD11-OT1A0A1B0GTJ5 212 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 PRSS37A4D1T9 235 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 FTCDNL1E5RQL4 147 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 TRGC1P0CF51 173 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 FGF9P31371 208 aaPredicted RBP5.61□□□□□ -1.51
CLCN3-204ENST00000504131 VWA2Q5GFL6 755 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 IRF2BP2Q7Z5L9 587 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 PTGR2Q8N8N7 351 aaPredicted RBP5.61□□□□□ -1.51
CLCN3-204ENST00000504131 AMER3Q8N944 861 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 C5orf17Q8NAS9 161 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 SUMF1Q8NBK3 374 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 SLC16A11Q8NCK7 471 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 OR2M3Q8NG83 312 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 ZNF502Q8TBZ5 544 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 GLMPQ8WWB7 406 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 LCN9Q8WX39 176 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 TMEM106AQ96A25 262 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 RAB37Q96AX2 223 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 TRMT61AQ96FX7 289 aaKnown RBP5.61□□□□□ -1.51
CLCN3-204ENST00000504131 C20orf173Q96LM9 149 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 TSPAN32Q96QS1 320 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 JMJD8Q96S16 334 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 ATF6BQ99941 703 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 HSPB9Q9BQS6 159 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 TMEM70Q9BUB7 260 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 GLIS2Q9BZE0 524 aaPredicted RBP5.61□□□□□ -1.51
CLCN3-204ENST00000504131 SLIRPQ9GZT3 109 aaKnown RBP5.61□□□□□ -1.51
CLCN3-204ENST00000504131 FBXL15Q9H469 300 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 BANF2Q9H503 90 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 PSG8Q9UQ74 426 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 MAP2P11137 1827 aaKnown RBP5.61□□□□□ -1.51
CLCN3-204ENST00000504131 CLDN34H7C241 214 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 ZNF140P52738 457 aaPredicted RBP5.61□□□□□ -1.51
CLCN3-204ENST00000504131 CXADRP78310 365 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 PLPPR5Q32ZL2 321 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 EPGNQ6UW88 154 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 PLXDC2Q6UX71 529 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 ATG4DQ86TL0 474 aaPredicted RBP5.61□□□□□ -1.51
CLCN3-204ENST00000504131 BPIFA4PQ86YQ2 179 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 OR10G9Q8NGN4 311 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 SECTM1Q8WVN6 248 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 GPR88Q9GZN0 384 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 SLC17A5Q9NRA2 495 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 SERTAD4Q9NUC0 356 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.61□□□□□ -1.51
CLCN3-204ENST00000504131 C1orf226A1L170 272 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 H3BMH7 237 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 APOC4-APOC2K7ER74 178 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 FGF17O60258 216 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 TSPAN2O60636 221 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 NEURL1O76050 574 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 ACTL6AO96019 429 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 FURINP09958 794 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 FGF5P12034 268 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 SLC10A2Q12908 348 aaPredicted RBP5.61□□□□□ -1.51
CLCN3-204ENST00000504131 LRRC55Q6ZSA7 311 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 ANKRD29Q8N6D5 301 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 TTC9BQ8N6N2 239 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 GHSRQ92847 366 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 KCTD12Q96CX2 325 aaKnown RBP5.61□□□□□ -1.51
CLCN3-204ENST00000504131 AMBRA1Q9C0C7 1298 aa5.61□□□□□ -1.51
CLCN3-204ENST00000504131 BPIFA1Q9NP55 256 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms