RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 MS4A3Q96HJ5 214 aa18.55■□□□□ 0.56
UBE2D3-216ENST00000503742 SELENOIQ9C0D9 397 aa18.55■□□□□ 0.56
UBE2D3-216ENST00000503742 BANF2Q9H503 90 aa18.55■□□□□ 0.56
UBE2D3-216ENST00000503742 GPR173Q9NS66 373 aa18.55■□□□□ 0.56
UBE2D3-216ENST00000503742 TNRC6AQ8NDV7 1962 aaKnown RBP18.55■□□□□ 0.56
UBE2D3-216ENST00000503742 EFSO43281 561 aa18.54■□□□□ 0.56
UBE2D3-216ENST00000503742 C1QBP02746 253 aa18.54■□□□□ 0.56
UBE2D3-216ENST00000503742 OR8B8Q15620 311 aa18.54■□□□□ 0.56
UBE2D3-216ENST00000503742 FAM189A2Q15884 450 aa18.54■□□□□ 0.56
UBE2D3-216ENST00000503742 METTL11BQ5VVY1 283 aa18.54■□□□□ 0.56
UBE2D3-216ENST00000503742 OR51S1Q8NGJ8 323 aa18.54■□□□□ 0.56
UBE2D3-216ENST00000503742 OR5D18Q8NGL1 313 aa18.54■□□□□ 0.56
UBE2D3-216ENST00000503742 MED30Q96HR3 178 aa18.54■□□□□ 0.56
UBE2D3-216ENST00000503742 SLX1AQ9BQ83 275 aa18.54■□□□□ 0.56
UBE2D3-216ENST00000503742 NPDC1Q9NQX5 325 aaPredicted RBP18.54■□□□□ 0.56
UBE2D3-216ENST00000503742 PROB1E7EW31 1015 aa18.53■□□□□ 0.56
UBE2D3-216ENST00000503742 XRCC2O43543 280 aa18.53■□□□□ 0.56
UBE2D3-216ENST00000503742 CYB5AP00167 134 aa18.53■□□□□ 0.56
UBE2D3-216ENST00000503742 IL5P05113 134 aa18.53■□□□□ 0.56
UBE2D3-216ENST00000503742 GNB3P16520 340 aa18.53■□□□□ 0.56
UBE2D3-216ENST00000503742 SLC22A6Q4U2R8 563 aa18.53■□□□□ 0.56
UBE2D3-216ENST00000503742 C1QTNF12Q5T7M4 302 aa18.53■□□□□ 0.56
UBE2D3-216ENST00000503742 GLDNQ6ZMI3 551 aaPredicted RBP18.53■□□□□ 0.56
UBE2D3-216ENST00000503742 ASCL5Q7RTU5 278 aa18.53■□□□□ 0.56
UBE2D3-216ENST00000503742 FAM89BQ8N5H3 189 aa18.53■□□□□ 0.56
UBE2D3-216ENST00000503742 TNFAIP8L1Q8WVP5 186 aa18.53■□□□□ 0.56
UBE2D3-216ENST00000503742 COL25A1Q9BXS0 654 aaPredicted RBP18.53■□□□□ 0.56
UBE2D3-216ENST00000503742 CST11Q9H112 138 aa18.53■□□□□ 0.56
UBE2D3-216ENST00000503742 SLA2Q9H6Q3 261 aa18.53■□□□□ 0.56
UBE2D3-216ENST00000503742 PYCARD-AS1I3L0S3 204 aa18.53■□□□□ 0.56
UBE2D3-216ENST00000503742 CRTAPO75718 401 aaPredicted RBP18.53■□□□□ 0.56
UBE2D3-216ENST00000503742 RAB3DO95716 219 aa18.53■□□□□ 0.56
UBE2D3-216ENST00000503742 SULT1A3P0DMM9 295 aa18.53■□□□□ 0.56
UBE2D3-216ENST00000503742 SULT1A4P0DMN0 295 aa18.53■□□□□ 0.56
UBE2D3-216ENST00000503742 RAD52P43351 418 aa18.53■□□□□ 0.56
UBE2D3-216ENST00000503742 TMEM50BP56557 158 aa18.53■□□□□ 0.56
UBE2D3-216ENST00000503742 ZP1P60852 638 aa18.53■□□□□ 0.56
UBE2D3-216ENST00000503742 RPS27AP62979 156 aaKnown RBP18.53■□□□□ 0.56
UBE2D3-216ENST00000503742 PLAC9Q5JTB6 97 aa18.53■□□□□ 0.56
UBE2D3-216ENST00000503742 TRAPPC6BQ86SZ2 158 aa18.53■□□□□ 0.56
UBE2D3-216ENST00000503742 RTN4RL2Q86UN3 420 aa18.53■□□□□ 0.56
UBE2D3-216ENST00000503742 GINS4Q9BRT9 223 aa18.53■□□□□ 0.56
UBE2D3-216ENST00000503742 C12orf49Q9H741 205 aa18.53■□□□□ 0.56
UBE2D3-216ENST00000503742 CLCF1Q9UBD9 225 aa18.53■□□□□ 0.56
UBE2D3-216ENST00000503742 ING4Q9UNL4 249 aa18.53■□□□□ 0.56
UBE2D3-216ENST00000503742 MED12LQ86YW9 2145 aa18.53■□□□□ 0.56
UBE2D3-216ENST00000503742 ZNF736B4DX44 427 aaPredicted RBP18.52■□□□□ 0.56
UBE2D3-216ENST00000503742 SOCS1O15524 211 aa18.52■□□□□ 0.56
UBE2D3-216ENST00000503742 WISP2O76076 250 aa18.52■□□□□ 0.56
UBE2D3-216ENST00000503742 IL18BPO95998 194 aa18.52■□□□□ 0.56
UBE2D3-216ENST00000503742 GSTP1P09211 210 aaKnown RBP18.52■□□□□ 0.56
UBE2D3-216ENST00000503742 ZNF735P0CB33 412 aa18.52■□□□□ 0.56
UBE2D3-216ENST00000503742 CXCL3P19876 107 aa18.52■□□□□ 0.56
UBE2D3-216ENST00000503742 ANXA7P20073 488 aaKnown RBP18.52■□□□□ 0.56
UBE2D3-216ENST00000503742 ARR3P36575 388 aa18.52■□□□□ 0.56
UBE2D3-216ENST00000503742 OR3A2P47893 321 aa18.52■□□□□ 0.56
UBE2D3-216ENST00000503742 GZMKP49863 264 aa18.52■□□□□ 0.56
UBE2D3-216ENST00000503742 CNN3Q15417 329 aaKnown RBP18.52■□□□□ 0.56
UBE2D3-216ENST00000503742 CLVS2Q5SYC1 327 aa18.52■□□□□ 0.56
UBE2D3-216ENST00000503742 FBXW9Q5XUX1 488 aa18.52■□□□□ 0.56
UBE2D3-216ENST00000503742 SEZ6L2Q6UXD5 910 aa18.52■□□□□ 0.56
UBE2D3-216ENST00000503742 ZNF584Q8IVC4 421 aa18.52■□□□□ 0.56
UBE2D3-216ENST00000503742 OR56B1Q8NGI3 324 aa18.52■□□□□ 0.56
UBE2D3-216ENST00000503742 NUDCD2Q8WVJ2 157 aa18.52■□□□□ 0.56
UBE2D3-216ENST00000503742 GMPPAQ96IJ6 420 aaPredicted RBP18.52■□□□□ 0.56
UBE2D3-216ENST00000503742 URM1Q9BTM9 101 aaKnown RBP18.52■□□□□ 0.56
UBE2D3-216ENST00000503742 TINAGL1Q9GZM7 467 aaPredicted RBP18.52■□□□□ 0.56
UBE2D3-216ENST00000503742 KCNK7Q9Y2U2 307 aa18.52■□□□□ 0.56
UBE2D3-216ENST00000503742 GVINP1Q7Z2Y8 2422 aa18.52■□□□□ 0.56
UBE2D3-216ENST00000503742 AQP7O14520 342 aa18.51■□□□□ 0.55
UBE2D3-216ENST00000503742 SSX5O60225 188 aa18.51■□□□□ 0.55
UBE2D3-216ENST00000503742 SS18L1O75177 396 aaPredicted RBP18.51■□□□□ 0.55
UBE2D3-216ENST00000503742 MPGP29372 298 aa18.51■□□□□ 0.55
UBE2D3-216ENST00000503742 PRSS12P56730 875 aa18.51■□□□□ 0.55
UBE2D3-216ENST00000503742 GRPEL2Q8TAA5 225 aa18.51■□□□□ 0.55
UBE2D3-216ENST00000503742 RAB3CQ96E17 227 aa18.51■□□□□ 0.55
UBE2D3-216ENST00000503742 FOXI3A8MTJ6 420 aaPredicted RBP18.51■□□□□ 0.55
UBE2D3-216ENST00000503742 HIST1H1DP16402 221 aaKnown RBP18.51■□□□□ 0.55
UBE2D3-216ENST00000503742 PRKACBP22694 351 aa18.51■□□□□ 0.55
UBE2D3-216ENST00000503742 ERP29P30040 261 aaKnown RBP18.51■□□□□ 0.55
UBE2D3-216ENST00000503742 RAB1AP62820 205 aa18.51■□□□□ 0.55
UBE2D3-216ENST00000503742 SLC36A1Q7Z2H8 476 aa18.51■□□□□ 0.55
UBE2D3-216ENST00000503742 OR1K1Q8NGR3 316 aa18.51■□□□□ 0.55
UBE2D3-216ENST00000503742 DACT3Q96B18 629 aaPredicted RBP18.51■□□□□ 0.55
UBE2D3-216ENST00000503742 TM2D1Q9BX74 207 aa18.51■□□□□ 0.55
UBE2D3-216ENST00000503742 M0QYG6 137 aa18.5■□□□□ 0.55
UBE2D3-216ENST00000503742 NRASP01111 189 aa18.5■□□□□ 0.55
UBE2D3-216ENST00000503742 CD79AP11912 226 aa18.5■□□□□ 0.55
UBE2D3-216ENST00000503742 MGMTP16455 207 aa18.5■□□□□ 0.55
UBE2D3-216ENST00000503742 THOC7Q6I9Y2 204 aaKnown RBP18.5■□□□□ 0.55
UBE2D3-216ENST00000503742 GVQW1Q8N7I0 195 aa18.5■□□□□ 0.55
UBE2D3-216ENST00000503742 OR4S1Q8NGB4 309 aa18.5■□□□□ 0.55
UBE2D3-216ENST00000503742 SEC22CQ9BRL7 303 aa18.5■□□□□ 0.55
UBE2D3-216ENST00000503742 GLRX2Q9NS18 164 aa18.5■□□□□ 0.55
UBE2D3-216ENST00000503742 FAM186AA6NE01 2351 aa18.5■□□□□ 0.55
UBE2D3-216ENST00000503742 IGKV1-27A0A075B6S5 117 aa18.5■□□□□ 0.55
UBE2D3-216ENST00000503742 MFNGO00587 321 aa18.5■□□□□ 0.55
UBE2D3-216ENST00000503742 SSNA1O43805 119 aa18.5■□□□□ 0.55
UBE2D3-216ENST00000503742 MTCP1P56278 107 aa18.5■□□□□ 0.55
UBE2D3-216ENST00000503742 ZBTB37Q5TC79 503 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms