RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 ADI1Q9BV57 179 aa10.72□□□□□ -0.69
HSPG2-213ENST00000498495 METTL17Q9H7H0 456 aaPredicted RBP10.72□□□□□ -0.69
HSPG2-213ENST00000498495 RNPEPL1Q9HAU8 725 aa10.72□□□□□ -0.69
HSPG2-213ENST00000498495 TRIM36Q9NQ86 728 aa10.72□□□□□ -0.69
HSPG2-213ENST00000498495 ENPP5Q9UJA9 477 aa10.72□□□□□ -0.69
HSPG2-213ENST00000498495 GNG8Q9UK08 70 aa10.72□□□□□ -0.69
HSPG2-213ENST00000498495 SLC22A13Q9Y226 551 aa10.72□□□□□ -0.69
HSPG2-213ENST00000498495 PIGLQ9Y2B2 252 aa10.72□□□□□ -0.69
HSPG2-213ENST00000498495 EXOGQ9Y2C4 368 aaKnown RBP10.72□□□□□ -0.69
HSPG2-213ENST00000498495 ANK3Q12955 4377 aaKnown RBP10.71□□□□□ -0.69
HSPG2-213ENST00000498495 PPIAL4CA0A0B4J2A2 164 aa10.71□□□□□ -0.69
HSPG2-213ENST00000498495 OOEPA6NGQ2 149 aa10.71□□□□□ -0.69
HSPG2-213ENST00000498495 TMEM210A6NLX4 147 aa10.71□□□□□ -0.69
HSPG2-213ENST00000498495 KIAA1324LA8MWY0 1029 aaPredicted RBP10.71□□□□□ -0.69
HSPG2-213ENST00000498495 C3orf80F5H4A9 247 aa10.71□□□□□ -0.69
HSPG2-213ENST00000498495 J3QLI3 93 aa10.71□□□□□ -0.69
HSPG2-213ENST00000498495 P2RY10O00398 339 aa10.71□□□□□ -0.69
HSPG2-213ENST00000498495 NDUFA2O43678 99 aa10.71□□□□□ -0.69
HSPG2-213ENST00000498495 DHRS3O75911 302 aa10.71□□□□□ -0.69
HSPG2-213ENST00000498495 LHBP01229 141 aa10.71□□□□□ -0.69
HSPG2-213ENST00000498495 THBS2P35442 1172 aa10.71□□□□□ -0.69
HSPG2-213ENST00000498495 GNB2P62879 340 aa10.71□□□□□ -0.69
HSPG2-213ENST00000498495 ZNF154Q13106 437 aa10.71□□□□□ -0.69
HSPG2-213ENST00000498495 ODF4Q2M2E3 257 aa10.71□□□□□ -0.69
HSPG2-213ENST00000498495 TP53I3Q53FA7 332 aa10.71□□□□□ -0.69
HSPG2-213ENST00000498495 CEP78Q5JTW2 689 aa10.71□□□□□ -0.69
HSPG2-213ENST00000498495 ZNF684Q5T5D7 378 aa10.71□□□□□ -0.69
HSPG2-213ENST00000498495 ZBTB37Q5TC79 503 aa10.71□□□□□ -0.69
HSPG2-213ENST00000498495 LYPD2Q6UXB3 125 aa10.71□□□□□ -0.69
HSPG2-213ENST00000498495 DOK3Q7L591 496 aa10.71□□□□□ -0.69
HSPG2-213ENST00000498495 KRT74Q7RTS7 529 aa10.71□□□□□ -0.69
HSPG2-213ENST00000498495 CATSPERDQ86XM0 798 aa10.71□□□□□ -0.69
HSPG2-213ENST00000498495 GCSAMQ8N6F7 178 aa10.71□□□□□ -0.69
HSPG2-213ENST00000498495 ACBD7Q8N6N7 88 aa10.71□□□□□ -0.69
HSPG2-213ENST00000498495 PACRGLQ8N7B6 248 aa10.71□□□□□ -0.69
HSPG2-213ENST00000498495 OR8B3Q8NGG8 313 aa10.71□□□□□ -0.69
HSPG2-213ENST00000498495 LRRC29Q8WV35 223 aa10.71□□□□□ -0.69
HSPG2-213ENST00000498495 RORBQ92753 470 aa10.71□□□□□ -0.69
HSPG2-213ENST00000498495 LGALS12Q96DT0 336 aa10.71□□□□□ -0.69
HSPG2-213ENST00000498495 OR8B2Q96RD0 313 aa10.71□□□□□ -0.69
HSPG2-213ENST00000498495 MYCBPQ99417 103 aaPredicted RBP10.71□□□□□ -0.69
HSPG2-213ENST00000498495 SSBP3Q9BWW4 388 aaPredicted RBP10.71□□□□□ -0.69
HSPG2-213ENST00000498495 C7orf69Q9H7B7 122 aa10.71□□□□□ -0.69
HSPG2-213ENST00000498495 AMBNQ9NP70 447 aa10.71□□□□□ -0.69
HSPG2-213ENST00000498495 MMP26Q9NRE1 261 aa10.71□□□□□ -0.69
HSPG2-213ENST00000498495 METRNQ9UJH8 293 aa10.71□□□□□ -0.69
HSPG2-213ENST00000498495 LRCH1Q9Y2L9 728 aa10.71□□□□□ -0.69
HSPG2-213ENST00000498495 RPL36Q9Y3U8 105 aaKnown RBP10.71□□□□□ -0.69
HSPG2-213ENST00000498495 NIPBLQ6KC79 2804 aaeCLIP10.7□□□□□ -0.7
HSPG2-213ENST00000498495 A0A1B0GTI1 187 aa10.7□□□□□ -0.7
HSPG2-213ENST00000498495 A0A1B0GVI7 797 aa10.7□□□□□ -0.7
HSPG2-213ENST00000498495 ZNF732B4DXR9 585 aa10.7□□□□□ -0.7
HSPG2-213ENST00000498495 TRAPPC2LH3BP13 241 aa10.7□□□□□ -0.7
HSPG2-213ENST00000498495 J3QRE1 110 aa10.7□□□□□ -0.7
HSPG2-213ENST00000498495 PHF1O43189 567 aaPredicted RBP10.7□□□□□ -0.7
HSPG2-213ENST00000498495 NRASP01111 189 aa10.7□□□□□ -0.7
HSPG2-213ENST00000498495 DBTP11182 482 aaKnown RBP10.7□□□□□ -0.7
HSPG2-213ENST00000498495 FAHP16930 419 aa10.7□□□□□ -0.7
HSPG2-213ENST00000498495 CD80P33681 288 aa10.7□□□□□ -0.7
HSPG2-213ENST00000498495 PSMB10P40306 273 aa10.7□□□□□ -0.7
HSPG2-213ENST00000498495 CSNK2BP67870 215 aa10.7□□□□□ -0.7
HSPG2-213ENST00000498495 HOXA4Q00056 320 aaPredicted RBP10.7□□□□□ -0.7
HSPG2-213ENST00000498495 CEACAM21Q3KPI0 293 aa10.7□□□□□ -0.7
HSPG2-213ENST00000498495 KLHL22Q53GT1 634 aa10.7□□□□□ -0.7
HSPG2-213ENST00000498495 FAM76BQ5HYJ3 339 aa10.7□□□□□ -0.7
HSPG2-213ENST00000498495 TTC23Q5W5X9 447 aa10.7□□□□□ -0.7
HSPG2-213ENST00000498495 WDR82Q6UXN9 313 aa10.7□□□□□ -0.7
HSPG2-213ENST00000498495 SCCPDHQ8NBX0 429 aa10.7□□□□□ -0.7
HSPG2-213ENST00000498495 OR5A2Q8NGI9 324 aa10.7□□□□□ -0.7
HSPG2-213ENST00000498495 OR14K1Q8NGZ2 314 aa10.7□□□□□ -0.7
HSPG2-213ENST00000498495 RPL3LQ92901 407 aaKnown RBP10.7□□□□□ -0.7
HSPG2-213ENST00000498495 MRPL48Q96GC5 212 aaKnown RBP10.7□□□□□ -0.7
HSPG2-213ENST00000498495 TMPRSS13Q9BYE2 586 aa10.7□□□□□ -0.7
HSPG2-213ENST00000498495 ERVK-18Q9QC07 812 aa10.7□□□□□ -0.7
HSPG2-213ENST00000498495 CLN8Q9UBY8 286 aa10.7□□□□□ -0.7
HSPG2-213ENST00000498495 OR5V1Q9UGF6 321 aa10.7□□□□□ -0.7
HSPG2-213ENST00000498495 POLR3KQ9Y2Y1 108 aaPredicted RBP10.7□□□□□ -0.7
HSPG2-213ENST00000498495 V9GYS6 101 aa10.7□□□□□ -0.7
HSPG2-213ENST00000498495 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.69□□□□□ -0.7
HSPG2-213ENST00000498495 A6NIN4 97 aa10.69□□□□□ -0.7
HSPG2-213ENST00000498495 A8MXK9 166 aa10.69□□□□□ -0.7
HSPG2-213ENST00000498495 J3QLW9 94 aa10.69□□□□□ -0.7
HSPG2-213ENST00000498495 DLGAP1O14490 977 aa10.69□□□□□ -0.7
HSPG2-213ENST00000498495 SYT7O43581 403 aa10.69□□□□□ -0.7
HSPG2-213ENST00000498495 FADS2O95864 444 aaKnown RBP10.69□□□□□ -0.7
HSPG2-213ENST00000498495 AVPP01185 164 aa10.69□□□□□ -0.7
HSPG2-213ENST00000498495 GYPAP02724 150 aa10.69□□□□□ -0.7
HSPG2-213ENST00000498495 MUC1P15941 1255 aaPredicted RBP10.69□□□□□ -0.7
HSPG2-213ENST00000498495 ZNF19P17023 458 aa10.69□□□□□ -0.7
HSPG2-213ENST00000498495 EGR1P18146 543 aa10.69□□□□□ -0.7
HSPG2-213ENST00000498495 PEX2P28328 305 aa10.69□□□□□ -0.7
HSPG2-213ENST00000498495 CFHR2P36980 270 aa10.69□□□□□ -0.7
HSPG2-213ENST00000498495 PITPNBP48739 271 aa10.69□□□□□ -0.7
HSPG2-213ENST00000498495 GPM6AP51674 278 aa10.69□□□□□ -0.7
HSPG2-213ENST00000498495 OR12D2P58182 307 aa10.69□□□□□ -0.7
HSPG2-213ENST00000498495 GNG3P63215 75 aa10.69□□□□□ -0.7
HSPG2-213ENST00000498495 ZNF91Q05481 1191 aa10.69□□□□□ -0.7
HSPG2-213ENST00000498495 MICBQ29980 383 aa10.69□□□□□ -0.7
HSPG2-213ENST00000498495 CDONQ4KMG0 1287 aa10.69□□□□□ -0.7
HSPG2-213ENST00000498495 DMRTC1Q5HYR2 192 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms